Contig 001234:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF051B02+                                                         CATGCAGTTAAAA
                      ____________________________________________________________
consensus                                                            CATGCAGTTAAAA
 
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rJMFF051B02+          GATGGGTGCTCGGTGCACCTGGTGTGTTAAACTTGTGTTACAACTGTAAAACCTCTCTCG
rJMFF049E23+                                TGTGTTAAACTTGTGTTACAACTGTAAAACCTCTCTCG
                      ____________________________________________________________
consensus             GATGGGTGCTCGGTGCACCTGGTGTGTTAAACTTGTGTTACAACTGTAAAACCTCTCTCG
 
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rJMFF051B02+          AGCTCCAGGTTCCAGACCTTGAATAGATAATGTGCAGTTAAGGTTGTTCCTGGCACTCCC
rJMFF049E23+          AGCTCCAGGTTCCAGACCTTGAATAGATAATGTGCAGTTAAGGTTGTTCCTGGCACTCCC
                      ____________________________________________________________
consensus             AGCTCCAGGTTCCAGACCTTGAATAGATAATGTGCAGTTAAGGTTGTTCCTGGCACTCCC
 
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rJMFF051B02+          CCCACCGTACCGTGTGTTAAACTTGTGTTTCAATATTAGAACCTTGAGCCCCAGATACCA
rJMFF049E23+          CCCACCGTACCGTGTGTTAAACTTGTGTTTCAATATTAGAACCTTGAGCCCCAGATACCA
                      ____________________________________________________________
consensus             CCCACCGTACCGTGTGTTAAACTTGTGTTTCAATATTAGAACCTTGAGCCCCAGATACCA
 
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rJMFF051B02+          GATCTTGACCCTGCATATGGGCAAGACTTGTCTTTAGGCACTTATTGTGTGGTAATTTTA
rJMFF049E23+          GATCTTGACCCTGCATATGGGCAAGACTTGTCTTTAGGCACTTATTGTGTGGTAATTTTA
                      ____________________________________________________________
consensus             GATCTTGACCCTGCATATGGGCAAGACTTGTCTTTAGGCACTTATTGTGTGGTAATTTTA
 
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rJMFF051B02+          TGCTTTTTTACTCAAGGATCATAATAAACTCAAAAATGTATATAATTTTATATGCTTTCC
rJMFF049E23+          TGCTTTTTTACTCAAGGATCATAATAAACTCAAAAATGTATATAATTTTATATGCTTTCC
                      ____________________________________________________________
consensus             TGCTTTTTTACTCAAGGATCATAATAAACTCAAAAATGTATATAATTTTATATGCTTTCC
 
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rJMFF051B02+          ATATACTGGGGAAACGGTTGAAGCTATTCAGACACACTTTGGAGTTGTACCCTTTGATTT
rJMFF049E23+          ATATACTGGGGAAACGGTTGAAGCTATTCAGACACACTTTGGAGTTGTACCCTTTGATTT
                      ____________________________________________________________
consensus             ATATACTGGGGAAACGGTTGAAGCTATTCAGACACACTTTGGAGTTGTACCCTTTGATTT
 
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rJMFF051B02+          GAATTTCTTCTTGTTTTGTGATATGTGGTTGATCAAATAACTGAATCTTCAGTTAGGCAG
rJMFF049E23+          GAATTTCTTCTTGTTTTGTGATATGTGGTTGATCAAATAACTGAATCTTCAGTTAGGCAG
                      ____________________________________________________________
consensus             GAATTTCTTCTTGTTTTGTGATATGTGGTTGATCAAATAACTGAATCTTCAGTTAGGCAG
 
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rJMFF051B02+          GTAGACACTTGTAATATTGCTTTTACTCTTTTTCAGATTCATACTCCTAAACTTACTACC
rJMFF049E23+          GTAGACACTTGTAATATTGCTTTTACTCTTTTTCAGATTCATACTCCTAAACTTACTACC
                      ____________________________________________________________
consensus             GTAGACACTTGTAATATTGCTTTTACTCTTTTTCAGATTCATACTCCTAAACTTACTACC