Contig 001230:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015E16Sequence617001792 (2)ref|XP_006343941.1|1e-36PREDICTED: probable mitochondrial import inner membrane translocase subunit TIM717001230 (2)ref|XP_010259181.1|1e-70PREDICTED: probable mitochondrial import inner membrane translocase subunit TIM
JMFF049A14Sequence641001792 (2)ref|XP_006343941.1|6e-43PREDICTED: probable mitochondrial import inner membrane translocase subunit TIM156001230 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF015E16+ TGCGGGGTTAGGAG
                      ____________________________________________________________
consensus TGCGGGGTTAGGAG
 
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rJMFF015E16+ TTGCTGCCGCTGCTGCATATGCTGTTTTTAAGGAACTTATATTTGAGCCAAAAGAGTACA
                      ____________________________________________________________
consensus TTGCTGCCGCTGCTGCATATGCTGTTTTTAAGGAACTTATATTTGAGCCAAAAGAGTACA
 
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rJMFF015E16+ AAATTTTTGGGAAGGCTCTCGATAGGATTCAACATGACAGCCAGGTTAGGGTGAGAATTG
                      ____________________________________________________________
consensus AAATTTTTGGGAAGGCTCTCGATAGGATTCAACATGACAGCCAGGTTAGGGTGAGAATTG
 
. : . : . : . : . : . :
rJMFF015E16+ GATCCCCTATTACTGGGTATGGATCAGAAAGTAGGAACCGTGCAGCTCGCCAACGCATTC
                      ____________________________________________________________
consensus GATCCCCTATTACTGGGTATGGATCAGAAAGTAGGAACCGTGCAGCTCGCCAACGCATTC
 
. : . : . : . : . : . :
rJMFF015E16+ CAAACAGAATATGGACTGATGAGGATGGGGTTGAACACGTTGAGGTCAATTTCTATATTC
                      ____________________________________________________________
consensus CAAACAGAATATGGACTGATGAGGATGGGGTTGAACACGTTGAGGTCAATTTCTATATTC
 
. : . : . : . : . : . :
rJMFF015E16+ GGGGACCACATGGAGCTGGCAAAGTTTTTGCAGAGATGTTCCAAGACAAAGAAGAGAAGC
                      ____________________________________________________________
consensus GGGGACCACATGGAGCTGGCAAAGTTTTTGCAGAGATGTTCCAAGACAAAGAAGAGAAGC
 
. : . : . : . : . : . :
rJMFF015E16+ AGTGGAAGTTCACCTATTTGATCGTTCAGATCAACTCACCTTCCCCGGCACAACTGATGC
                      ____________________________________________________________
consensus AGTGGAAGTTCACCTATTTGATCGTTCAGATCAACTCACCTTCCCCGGCACAACTGATGC
 
. : . : . : . : . : . :
rJMFF015E16+ TCGAGTCTTATGTCCCAGCCTGAATAAAAACCGCTAAATGTCTTGCTGCATTCTGTCTCT
                      ____________________________________________________________
consensus TCGAGTCTTATGTCCCAGCCTGAATAAAAACCGCTAAATGTCTTGCTGCATTCTGTCTCT
 
. : . : . : . : . : . :
rJMFF015E16+ GACACCCTTCAATCACACAAATAGTTCTCCAATTTTTTACTTACCAAGATGTGATCAAGG
                      ____________________________________________________________
consensus GACACCCTTCAATCACACAAATAGTTCTCCAATTTTTTACTTACCAAGATGTGATCAAGG
 
. : . : . : . : . : . :
rJMFF015E16+ ACAAATTCTTGAATGGGGTGTGTTTTCTGATTTTGATGGGATGCAACAATTGGTATCAAC
                      ____________________________________________________________
consensus ACAAATTCTTGAATGGGGTGTGTTTTCTGATTTTGATGGGATGCAACAATTGGTATCAAC
 
. : . : . : . : . : . :
rJMFF015E16+ CCCACAGTCTGCTGTTATTCATTTTTCATGCCAGCCATGGTGTTGAAATAGGCATGCTGT
rJMFF049A14+ TTCATGCCAGCCATGGTGTTGAAATAGGCATGCTGT
                      ____________________________________________________________
consensus CCCACAGTCTGCTGTTATTCATTTTTCATGCCAGCCATGGTGTTGAAATAGGCATGCTGT
 
. : . : . : . : . : . :
rJMFF015E16+ CACCTTACATCTTTGTTTTTTGATATTTTCAAAGCTCATGTAATGCATGGTGCATTGACA
rJMFF049A14+ CCCCTTACATCTTTGTTTTTTGATATTTTCAAAGCTCATGTAATGCATGGTGCATTGACA
                      ____________________________________________________________
consensus CCCCTTACATCTTTGTTTTTTGATATTTTCAAAGCTCATGTAATGCATGGTGCATTGACA
 
. : . : . : . : . : . :
rJMFF015E16+ ATGGGATAGGAGTTTATTCTTACATGTTTCTTGATATAAAATG
rJMFF049A14+ ATGGGATAGGAGTTTATTCTTACATGTTTCTTGATATAAAATGCAATGCAACTTGAAGTT
                      ____________________________________________________________
consensus ATGGGATAGGAGTTTATTCTTACATGTTTCTTGATATAAAATGCAATGCAACTTGAAGTT