Contig 001227:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004O01Sequence568003097 (5)ref|XP_008779796.1|2e-58PREDICTED: magnesium transporter NIPA2-like, partial [Phoenix dactylifera]716001227 (5)
JMFF009N23Sequence574003097 (5)ref|XP_009760351.1|239PREDICTED: probable magnesium transporter NIPA7 [Nicotiana sylvestris]771001227 (5)ref|XP_011043800.1|52.4PREDICTED: probable magnesium transporter NIPA7 [Populus euphratica]
JMFF047C14Sequence421003097 (5)ref|XP_008779796.1|3e-44PREDICTED: magnesium transporter NIPA2-like, partial [Phoenix dactylifera]373001227 (5)
JMFF048K10Sequence428003097 (5)ref|XP_008779796.1|1e-41PREDICTED: magnesium transporter NIPA2-like, partial [Phoenix dactylifera]410001227 (5)
JMSF048I23Sequence697003097 (5)ref|XP_010931997.1|4e-100PREDICTED: probable magnesium transporter NIPA3 isoform X2 [Elaeis guineensis]711001227 (5)

Alignment

This contig is upended


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rJMFF004O01+                                                               CCCGTCA
rJMSF048I23+                                                               CCCGTCA
rJMFF009N23+                  CATGGAGAGAAGTTCGTCTGTTAGAGGTAGTTATACTTCTTTATCCCCGTCA
                      ____________________________________________________________
consensus                     CATGGAGAGAAGTTCGTCTGTTAGAGGTAGTTATACTTCTTTATCCCCGTCA
 
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rJMFF004O01+          TTGTTGGCCCAACTATGTAGTGCAAATGGGGAACCATCGAAACATGAAGACGAGGGTAGT
rJMSF048I23+          TTGTTGGCCCAACTATGTAGTGCAAATGGGGAACCATCGAAACATGAAGACGAGGGTAGT
rJMFF009N23+          TTGTTGGCCCAACTATGTAGTGCAAATGGGGAACCATCGAAACATGAAGACGAGGGTAGT
                      ____________________________________________________________
consensus             TTGTTGGCCCAACTATGTAGTGCAAATGGGGAACCATCGAAACATGAAGACGAGGGTAGT
 
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rJMFF004O01+          GAGGCATGATTCAGCCCAGTGGAAGTCGCCTCAAGAAGACGAGAGCTTTACACATGACAT
rJMSF048I23+          GAGGCATGATTCAGCCCAGTGGAAGTCGCCTCAAGAAGACGAGAGCTTTACACATGACAT
rJMFF009N23+          GAGGCATGATTCAGCCCAGTGGAAGTCGCCTCAAGAAGACGAGAGCTTTACACATGACAT
                      ____________________________________________________________
consensus             GAGGCATGATTCAGCCCAGTGGAAGTCGCCTCAAGAAGACGAGAGCTTTACACATGACAT
 
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rJMFF004O01+          AATCACCCGAAAGCTAGCCTATTTGATTAAGACTTTTTTGTTAGCAAAGGAGTTATCTCT
rJMSF048I23+          AATCACCCGAAAGCTAGCCTATTTGATTAAGACTTTTTTGTTAGCAAAGGAGTTATCTCT
rJMFF009N23+          AATCACCCGAAAGCTAGCCTATTTGATTAAGACTTTTTTGTTAGCAAAGGAGTTATCTCT
                      ____________________________________________________________
consensus             AATCACCCGAAAGCTAGCCTATTTGATTAAGACTTTTTTGTTAGCAAAGGAGTTATCTCT
 
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rJMFF004O01+          CGAGATTATTTTGTACGCGATAAGGCAATAATGTGACTTCTTGGAAGGTGTTTCTGAAGC
rJMSF048I23+          CGAGATTATTTTGTACGCGATAAGGCAATAATGTGACTTCTTGGAAGGTGTTTCTGAAGC
rJMFF009N23+          CGAGATTATTTTGTACGCGATAAGGCAATAATGTGACTTCTTGGAAGGTGTTTCTGAAGC
                      ____________________________________________________________
consensus             CGAGATTATTTTGTACGCGATAAGGCAATAATGTGACTTCTTGGAAGGTGTTTCTGAAGC
 
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rJMFF004O01+          ATTCGTGTTTCACAACTATGGTTCAGCCGCCTGTTTGTGGCTTCACCTTTGCGTTCTGAA
rJMSF048I23+          ATTCGTGTTTCACAACTATGGTTCAGCCGCCTGTTTGTGGCTTCACCTTTGCGTTCTGAA
rJMFF009N23+          ATTCGTGTTTCACAACTATGGTTCAGCCGCCTGTTTGTGGCTTCACCTTTGCGTTCTGAA
                      ____________________________________________________________
consensus             ATTCGTGTTTCACAACTATGGTTCAGCCGCCTGTTTGTGGCTTCACCTTTGCGTTCTGAA
 
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rJMFF004O01+          TGGTCAAAAAATCGGAAGAAATTCATCGGGTAGCTGCTTCAACTTGGCATGTACAGTTTT
rJMSF048I23+          TGGTCAAAAAATCGGAAGAAATTCATCGGGTAGCTGCTTCAACTTGGCATGTACAGTTTT
rJMFF009N23+          TGGTCAAAAAATCGGAAGAAATTCATCGGGTAGCTGCTTCAACTTGGCATGTACAGTTTT
                      ____________________________________________________________
consensus             TGGTCAAAAAATCGGAAGAAATTCATCGGGTAGCTGCTTCAACTTGGCATGTACAGTTTT
 
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rJMFF004O01+          TCCGTGTTCTAGGCATGATATATACAGTGTGGAATTAGATACATATTCCGATATTCGTTC
rJMSF048I23+          TCCGTGTTCTAGGCATGATATATACAGTGTGGAATTAGATACATATTCCGATATTCGTTC
rJMFF009N23+          TCCGTGTTCTAGGCATGATATATACAGTGTGGAATTAGATACATATTCCGATATTCGTTC
rJMFF047C14+                                           ATTAGATACATATTCCGATATTCGTTC
rJMFF048K10+                    AGGCATGATATATACAGTGTGGAATTAGATACATATTCCGATATTCGTTC
                      ____________________________________________________________
consensus             TCCGTGTTCTAGGCATGATATATACAGTGTGGAATTAGATACATATTCCGATATTCGTTC
 
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rJMFF004O01+          AATATCTTGTGATTATATTTTGGAGAAAGGGATTACAAAGATCTGAGCTGAAGCATACAT
rJMSF048I23+          AATATCTTGTGATTATATTTTGGAGAAAGGGATTACAAAGATCTGAGCTGAAGCATACAT
rJMFF009N23+          AATATCTTGTGATTATATTTTGGAGAAAGGGATTACAAAGATCTGAGCTGAAGCATACAT
rJMFF047C14+          AATATCTTGTGATTATATTTTGGAGAAAGGGATTACAAAGATCTGAGCTGAAGCATACAT
rJMFF048K10+          AATATCTTGTGATTATATTTTGGAGAAAGGGATTACAAAGATCTGAGCTGAAGCATACAT
                      ____________________________________________________________
consensus             AATATCTTGTGATTATATTTTGGAGAAAGGGATTACAAAGATCTGAGCTGAAGCATACAT
 
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rJMFF004O01+          GTTGCTGCATGGCCAAATTTATAGAGGTTGGAAGTTCATTCATTGAATGGCTTATGGCCA
rJMSF048I23+          GTTGCTGCATGGCCAAATTTATAGAGGTTGGAAGTTCATTCATTGAATGGCTTATGGCCA
rJMFF009N23+          GTTGCTGCATGGCCAAATTTATAGAGGTTGGAAGTTCATTCATTGAATGGCTTATGGCCA
rJMFF047C14+          GTTGCTGCATGGCCAAATTTATAGAGGTTGGAAGTTCATTCATTGAATGGCTTATGGCCA
rJMFF048K10+          GTTGCTGCATGGCCAAATTTATAGAGGTTGGAAGTTCATTCATTGAATGGCTTATGGCCA
                      ____________________________________________________________
consensus             GTTGCTGCATGGCCAAATTTATAGAGGTTGGAAGTTCATTCATTGAATGGCTTATGGCCA
 
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rJMFF004O01+          TGAAAATAAAGTGCAGTATCCATTGTTATCGTTGCTGGATTTATCCCTTTGTCTGGGGTG
rJMSF048I23+          TGAAAATAAAGTGCAGTATCCATTGTTATCGTTGCTGGATTTATCCCTTTGTCTGGGGTG
rJMFF009N23+          TGAAAATAAAGTGCAGTATCCATTGTTATCGTTGCTGGATTTATCCCTTTGTCTGGGGTG
rJMFF047C14+          TGAAAATAAAGTGCAGTATCCATTGTTATCGTTGCTGGATTTATCCCTTTGTCTGGGGTG
rJMFF048K10+          TGAAAATAAAGTGCAGTATCCATTGTTATCGTTGCTGGATTTATCCCTTTGTCTGGGGTG
                      ____________________________________________________________
consensus             TGAAAATAAAGTGCAGTATCCATTGTTATCGTTGCTGGATTTATCCCTTTGTCTGGGGTG
 
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rJMFF004O01+          TGGTTCAGGAAACTGGTTGGTACAATTTGTTGTATAGTTAAAGTATATAGAATTTATCTG
rJMSF048I23+          TGGTTCAGGAAACTGGTTGGTACAATTTGTTGTATAGTTAAAGTATATAGAATTTATCTG
rJMFF009N23+          TGGTTCAGGAAACTGGTTGGTACAATTTGTTGTATAGTTAAAGTATATAGAATTTATCTG
rJMFF047C14+          TGGTTCAGGAAACTGGTTGGTACAATTTGTTGTATAGTTAAAGTATATAGAATTTATCTG
rJMFF048K10+          TGGTTCAGGAAACTGGTTGGTACAATTTGTTGTATAGTTAAAGTATATAGAATTTATCTG
                      ____________________________________________________________
consensus             TGGTTCAGGAAACTGGTTGGTACAATTTGTTGTATAGTTAAAGTATATAGAATTTATCTG
 
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rJMFF004O01+          TTTATAGATTTGCTGCTTGTGTGTTTTGTACATGCTAATTGAAACATTA           
rJMSF048I23+          TTTATAGATTTGCTGCTTGTGTGTTTTGTACATGCTAAT                     
rJMFF009N23+          TTTATAGATTTGCTGCTTGTGTGTTTTGTACATGCTAATTGAAACATTATACTTCAATT 
rJMFF047C14+          TTTATAGATTTGCTGCTTGTGTGTTTTGTACATGCTAATTGAAACATTATACTTCAATTT
rJMFF048K10+          TTTATAGATTTGCTGCTTGTGTGTTTTGTACATGCTAATTGAAACATTATACTTCAATTT
                      ____________________________________________________________
consensus             TTTATAGATTTGCTGCTTGTGTGTTTTGTACATGCTAATTGAAACATTATACTTCAATTT
 
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rJMFF047C14+          TCATATAGAACATTTACATAAAAAAAAAAAAAAAACTCTCCAGGGT              
rJMFF048K10+          TCATATAGAACATTTACATAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             TCATATAGAACATTTACATAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG