Contig 001225:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF024C04Sequence529012193 (4)emb|CDP10503.1|7e-53unnamed protein product [Coffea canephora]774001225 (4)gb|EYU34935.1|1e-80hypothetical protein MIMGU_mgv1a004458mg [Erythranthe guttata]
JMFF048D18Sequence443012193 (4)emb|CDP10503.1|5e-47unnamed protein product [Coffea canephora]462001225 (4)gb|EYU34935.1|9e-37hypothetical protein MIMGU_mgv1a004458mg [Erythranthe guttata]
JMSF049M24Sequence650012193 (4)emb|CDP10503.1|1e-72unnamed protein product [Coffea canephora]745001225 (4)gb|EYU34935.1|2e-79hypothetical protein MIMGU_mgv1a004458mg [Erythranthe guttata]
JMSF050M24Sequence599012193 (4)emb|CDP10503.1|4e-65unnamed protein product [Coffea canephora]665001225 (4)gb|EYU34935.1|9e-74hypothetical protein MIMGU_mgv1a004458mg [Erythranthe guttata]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF049M24+ AAACACAGCNTGCTGGAGCAAGCATATGCTTGTAAG
rJMFF024C04+ AAACAAGTACAAAATGATACCCAAAACACAGCTTGCTGGAGCAAGCATATGCTTGTAAG
                      ____________________________________________________________
consensus AAACAAGTACAAAATGATACCCAAAACACAGCTTGCTGGAGCAAGCATATGCTTGTAAG
 
. : . : . : . : . : . :
rJMSF049M24+ CTCTTCTGGCTTCCTGATAATTTTTATGAAAAAGTAGAAGAAGGGAGCCTCATTCTTAAG
rJMSF050M24+ TGATAATTTTTATGAAAAAGTAGAAGAAGGGAGCCTCATTCTTAAG
rJMFF024C04+ CTCTTCTGGCTTCCTGATAATTTTTATGAAAAAGTAGAAGAAGGGAGCCTCATTCTTAAG
                      ____________________________________________________________
consensus CTCTTCTGGCTTCCTGATAATTTTTATGAAAAAGTAGAAGAAGGGAGCCTCATTCTTAAG
 
. : . : . : . : . : . :
rJMSF049M24+ CAATCCAACAACCTCAGTTTCTGCAAACAAGGCCTACTTCTTGATTCAGATCAATCTGAG
rJMSF050M24+ CAATCCAACAACCTCAGTTTCTGCAAACAAGGCCTACTTCTTGATTCAGATCAATCTGAG
rJMFF024C04+ CAATCCAACAACCTCAGTTTCTGCAAACAAGGCCTACTTCTTGATTCAGATCAATCTGAG
                      ____________________________________________________________
consensus CAATCCAACAACCTCAGTTTCTGCAAACAAGGCCTACTTCTTGATTCAGATCAATCTGAG
 
. : . : . : . : . : . :
rJMSF049M24+ CCTATAAAGGCTGACCTTGTCATTCTTGCCACCGGATATAAAAGCCAAGAAAAGCTCAGA
rJMSF050M24+ CCTATAAAGGCTGACCTTGTCATTCTTGCCACCGGATATAAAAGCCAAGAAAAGCTCAGA
rJMFF024C04+ CCTATAAAGGCTGACCTTGTCATTCTTGCCACCGGATATAAAAGCCAAGAAAAGCTCAGA
                      ____________________________________________________________
consensus CCTATAAAGGCTGACCTTGTCATTCTTGCCACCGGATATAAAAGCCAAGAAAAGCTCAGA
 
. : . : . : . : . : . :
rJMSF049M24+ AATCTTTTCACCTCTAAAACCTTTCAGAACTACATCATCAGCCCCACTTCCTCACTACTT
rJMSF050M24+ AATCTTTTCACCTCTAAAACCTTTCAGAACTACATCATCAGCCCCACTTCCTCACTACTT
rJMFF024C04+ AATCTTTTCACCTCTAAAACCTTTCAGAACTACATCATCAGCCCCACTTCCTCACTACTT
                      ____________________________________________________________
consensus AATCTTTTCACCTCTAAAACCTTTCAGAACTACATCATCAGCCCCACTTCCTCACTACTT
 
. : . : . : . : . : . :
rJMSF049M24+ GCTCTATACAGGCAAATGATTCCTCCGCGGATTCCTGGGATAGCAATAATAGGGCATTCA
rJMSF050M24+ GCTCTATACAGGCAAATGATTCCTCCGCGGATTCCTGGGATAGCAATAATAGGGCATTCA
rJMFF024C04+ GCTCTATACAGGCAAATGATTCCTCCGCGGATTCCTGGGATAGCAATAATAGGGCATTCA
                      ____________________________________________________________
consensus GCTCTATACAGGCAAATGATTCCTCCGCGGATTCCTGGGATAGCAATAATAGGGCATTCA
 
. : . : . : . : . : . :
rJMSF049M24+ GAGAGTTTTGCAAACCTTTATACCTTTGATGTGAGATGCCAATGGCTGGCACATTTTCTT
rJMSF050M24+ GAGAGTTTTGCAAACCTTTATACCTTTGATGTGAGATGCCAATGGCTGGCACATTTTCTT
rJMFF024C04+ GAGAGTTTTGCAAACCTTTATACCTTTGATGTGAGATGCCAATGGCTGGCACATTTTCTT
rJMFF048D18+ TATACCTTTGATGTGAGATGCCAATGGCTGGCACATTTTCTT
                      ____________________________________________________________
consensus GAGAGTTTTGCAAACCTTTATACCTTTGATGTGAGATGCCAATGGCTGGCACATTTTCTT
 
. : . : . : . : . : . :
rJMSF049M24+ GATGAGAAATTGAAGATGCCAAGCATAAAGGAGATGGAGAAGGATGTTGAGGAGTGGGAA
rJMSF050M24+ GATGAGAAATTGAAGATGCCAAGCATAAAGGAGATGGAGAAGGATGTTGAGGAGTGGGAA
rJMFF024C04+ GATGAGAAATTGAAGATGCCAAGCATAAAGGAGATGGAGAAGGATGTTGAGGAGTGGGAA
rJMFF048D18+ GATGAGAAATTGAAGATGCCAAGCATAAAGGAGATGGAGAAGGATGTTGAGGAGTGGGAA
                      ____________________________________________________________
consensus GATGAGAAATTGAAGATGCCAAGCATAAAGGAGATGGAGAAGGATGTTGAGGAGTGGGAA
 
. : . : . : . : . : . :
rJMSF049M24+ AAATACATGAGAAAATACTCAGGGGAGGTTTACAGAGGGCCATGCATTGGGGGTCTGCAT
rJMSF050M24+ AAATACATGAGAAAATACTCAGGGGAGGTTTACAGAGGGCCATGCATTGGGGGTCTGCAT
rJMFF024C04+ AAATACATGAGAAAATACTCAGGGGAGGTTTACAGAGGGCCATGCATTGGGGGTCTGCAT
rJMFF048D18+ AAATACATGAGAAAATACTCAGGGGAGGTTTACAGAGGGCCATGCATTGGGGGTCTGCAT
                      ____________________________________________________________
consensus AAATACATGAGAAAATACTCAGGGGAGGTTTACAGAGGGCCATGCATTGGGGGTCTGCAT
 
. : . : . : . : . : . :
rJMSF049M24+ ATATGGTATAATGATCAGCTGTGCAGAGATGTTGGGTGCAACCCAAGAAGAAACAAGGGG
rJMSF050M24+ ATATGGTATAATGATCAGCTGTGCAGAGATGTTGGGTGCAACCCAAGAAGAAACAAGGGG
rJMFF024C04+ ATATGGTATAATGATCAGCTGTGCAGAGATGTTGGGTGCAACCCAAGAAGAAACAAGGGG
rJMFF048D18+ ATACTGTATAATGATCAGCTGTGCAGAGATGTTGGGTGCAACCCAAGAAGAAACAAGGGG
                      ____________________________________________________________
consensus ATATGGTATAATGATCAGCTGTGCAGAGATGTTGGGTGCAACCCAAGAAGAAACAAGGGG
 
. : . : . : . : . : . :
rJMSF049M24+ TGGCTATTGGACTTGGTACACCCCTATGCTCCACCAGACTATGTTGCATTTGCTACTACT
rJMSF050M24+ TGGCTATTGGACTTGGTACACCCCTATGCTCCACCAGACTATGTTGCATTTGCTACTACT
rJMFF024C04+ TGGCTATTGGACTTGGTACACCCCTATGCTCCACCAGACTATGTTGCATTTGCTACTACT
rJMFF048D18+ TGGCTATTGGACTTGGTACACCCCTATGCTCCACCAGACTATGTTGCATTTGCTACTACT
                      ____________________________________________________________
consensus TGGCTATTGGACTTGGTACACCCCTATGCTCCACCAGACTATGTTGCATTTGCTACTACT
 
. : . : . : . : . : . :
rJMSF049M24+ CCAAAATAATTTTAGTTTAATTTAATTTAATTTAATTTGTTGGATCTGTAATAAGGGGGA
rJMSF050M24+ CCAAAATAATTTTAGTTTAATTTAATTTAATTTAATTTGTTGGATCTGTAATAAGGGGGA
rJMFF024C04+ CCAAAATAATTTTAGTTTAATTTAATTTAATTTAATTTGTTGGATCTGTAATAAGGGGGA
rJMFF048D18+ CCAAAATAATTTTAGTTTAATTTAATTTAATTTAATTTGTTGGATCTGTAATAAGGGGGA
                      ____________________________________________________________
consensus CCAAAATAATTTTAGTTTAATTTAATTTAATTTAATTTGTTGGATCTGTAATAAGGGGGA
 
. : . : . : . : . : . :
rJMSF049M24+ TTAATTGCCATGTCATGCCTACAAGCATGCATGT
rJMSF050M24+ TTAATTGCCATGTCATGCC
rJMFF024C04+ TTAATTGCCATGTCATGCCTACAAGCATGCATGTTGTTGTTGACCCTTAAGAA
rJMFF048D18+ TTAATTGCCATGTCATGCCTACAAGCATGCATGTTGTTGTTGACCCTTAAGAATAATTTA
                      ____________________________________________________________
consensus TTAATTGCCATGTCATGCCTACAAGCATGCATGTTGTTGTTGACCCTTAAGAATAATTTA
 
. : . : . : . : . : . :
rJMFF048D18+ TTTACTTGTCATTCTAGTAAAAAAAAAAAAAAAACTCTCCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus TTTACTTGTCATTCTAGTAAAAAAAAAAAAAAAACTCTCCCAGGGTGATCCGCCATAAGG