| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF008P24 | Sequence | 605 | 003285 (5) | ref|XP_006365945.1| | 2e-16 | PREDICTED: acyl-coenzyme A thioesterase 9, mitochondrial-like isoform X2 [Solan | 773 | 001224 (6) | ref|XP_004251999.1| | 6e-68 | PREDICTED: acyl-coenzyme A thioesterase 9, mitochondrial [Solanum lycopersicum] |
| JMFF048A10 | Sequence | 463 | 003285 (5) | 406 | 001224 (6) | ||||||
| JMSF007B05 | Sequence | 282 | 003285 (5) | 826 | 001224 (6) | ref|XP_011085044.1| | 4e-93 | PREDICTED: acyl-coenzyme A thioesterase 9, mitochondrial-like isoform X1 [Sesam | |||
| JMSF037E19 | Sequence | 705 | 003285 (5) | ref|XP_004251999.1| | 2e-27 | PREDICTED: acyl-coenzyme A thioesterase 9, mitochondrial [Solanum lycopersicum] | 758 | 001224 (6) | ref|XP_011085044.1| | 1e-79 | PREDICTED: acyl-coenzyme A thioesterase 9, mitochondrial-like isoform X1 [Sesam |
| JMSF043M10 | Sequence | 750 | 003285 (5) | ref|XP_006365945.1| | 5e-38 | PREDICTED: acyl-coenzyme A thioesterase 9, mitochondrial-like isoform X2 [Solan | 751 | 001224 (6) | ref|XP_011085045.1| | 6e-80 | PREDICTED: acyl-coenzyme A thioesterase 9, mitochondrial-like isoform X2 [Sesam |
| JMSF044M10 | Sequence | 496 | 001224 (6) | emb|CDP08063.1| | 3e-48 | unnamed protein product [Coffea canephora] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF008P24+ AGAAGTGAATAGGATTAATGAAT
rJMSF007B05+ AGAACCGAGAGGGNACAGAAAAGGAAGTGATATGNAGAAGTGAATAGGATTAATGAAT
____________________________________________________________
consensus AGAACCGAGAGGGNACAGAAAAGGAAGTGATATGNAGAAGTGAATAGGATTAATGAAT
. : . : . : . : . : . :
rJMFF008P24+ TGTTGGGCGAGGGCAGAGTGTTTTGCGACATGCCAGCTTTGGCAGACAGGGATAGTATTC
rJMSF007B05+ TGTTGGGCGAGGGCAGAGTGTTTTGCGACATGCCAGCTTTGGCAGACAGGGATAGTATTC
rJMSF043M10+ GCAGAGTGTTTTGCGACATGCCAGC-TTGGCAGACAGGGATAGTATTC
rJMSF037E19+ GCAGAGTGTTTTGCGACATGCCAGC-TTGGCAGACAGGGATAGTATTC
____________________________________________________________
consensus TGTTGGGCGAGGGCAGAGTGTTTTGCGACATGCCAGCTTTGGCAGACAGGGATAGTATTC
. : . : . : . : . : . :
rJMFF008P24+ TGATCCAGGATACCTGCCTCCAGAATTCCTTGATTTGCCAACCTCAGCAAAGGAACATCC
rJMSF007B05+ TGATCCAGGATACCTGCCTCCAGAATTCCTTGATTTGCCAACCTCAGCAAAGGAACATCC
rJMSF043M10+ TGATCCAGGATACCTGCCTCCAGAATTCCTTGATTTGCCAACCTCAGCAAAGGAACATCC
rJMSF037E19+ TGATCCAGGATACCTGCCTCCAGAATTCCTTGATTTGCCAACCTCAGCAAAGGAACATCC
____________________________________________________________
consensus TGATCCAGGATACCTGCCTCCAGAATTCCTTGATTTGCCAACCTCAGCAAAGGAACATCC
. : . : . : . : . : . :
rJMFF008P24+ ATGGTTCGTATATTTGGAGGCTTTTTGATGAGAAGAGCTTTTGAGCTGGCCTATGCAACG
rJMSF007B05+ ATGG-TCGTATATTTGGAGGCTTTTTGATGAGAAGAGCTTTTGAGCTGGCCTATGCAACG
rJMSF043M10+ ATGG-TCGTATATTTGGAGGCTTTTTGATGAGAAGAGCTTTTGAGCTGGCCTATGCAACG
rJMSF037E19+ ATGG-TCGTATATTTGGAGGCTTTTTGATGAGAAGAGCTTTTGAGCTGGCCTATGCAACG
____________________________________________________________
consensus ATGG-TCGTATATTTGGAGGCTTTTTGATGAGAAGAGCTTTTGAGCTGGCCTATGCAACG
. : . : . : . : . : . :
rJMFF008P24+ GCTTACGCATTTGCAGGGAGTGCACCTTGCTTCAAAG-AAGTTGATCATATTGATTTCTT
rJMSF007B05+ GCTTACGCATTTGCAGGGAGTGCACCTTGCTTCAAAG-AAGTTGATCATATTGATTTCTT
rJMSF044M10+ CTTACGCATTTGCAGGGAGTGCACCTTGCTTCAAAGAAAGTTGATCATATNGATTTCTT
rJMSF043M10+ GCTTACGCATTTGCAGGGAGTGCACCTTGCTTCAAAG-AAGTTGATCATATTGATTTCTT
rJMSF037E19+ GCTTACGCATTTGCAGGGAGTGCACCTTGCTTCAAAG-AAGTTGATCATATTGATTTCTT
____________________________________________________________
consensus GCTTACGCATTTGCAGGGAGTGCACCTTGCTTCAAAG-AAGTTGATCATATTGATTTCTT
. : . : . : . : . : . :
rJMFF008P24+ AAAACCTGTAGATGTTGGAAATTTCCTTCGCTTCAAATCATGTGTTTTGTACACAGAACT
rJMSF007B05+ AAAACCTGTAGATGTTGGAAATTTCCTTCGCTTCAAATCATGTGTTTTGTACACAGAACT
rJMSF044M10+ AAAACCTGTAGATGTTGGAAATTTCCTTCGCTTCAAATCATGTGTTTTGTACACAGAACT
rJMSF043M10+ AAAACCTGTAGATGTTGGAAATTTCCTTCGCTTCAAATCATGTGTTTTGTACACAGAACT
rJMSF037E19+ AAAACCTGTAGATGTTGGAAATTTCCTTCGCTTCAAATCATGTGTTTTGTACACAGAACT
____________________________________________________________
consensus AAAACCTGTAGATGTTGGAAATTTCCTTCGCTTCAAATCATGTGTTTTGTACACAGAACT
. : . : . : . : . : . :
rJMFF008P24+ GGAGAATCCTTCTCAGCCTTTGATTAATGTGGAGGTTGTAGCTCATGTTACAAGACCCGA
rJMSF007B05+ GGAGAATCCTTCTCAGCCTTTGATTAATGTGGAGGTTGTAGCTCATGTTACAAGACCCGA
rJMSF044M10+ GGAGAATCCTTCTCAGCCTTTGATTAATGTGGAGGTTGTAGCTCATGTTACAAGACCCGA
rJMSF043M10+ GGAGAATCCTTCTCAGCCTTTGATTAATGTGGAGGTTGTAGCTCATGTTACAAGACCCGA
rJMSF037E19+ GGAGAATCCTTCTCAGCCTTTGATTAATGTGGAGGTTGTAGCTCATGTTACAAGACCCGA
____________________________________________________________
consensus GGAGAATCCTTCTCAGCCTTTGATTAATGTGGAGGTTGTAGCTCATGTTACAAGACCCGA
. : . : . : . : . : . :
rJMFF008P24+ ACTGCGGTCCAGGTGAGGTATCAAACAAGTTCTACTTCACATTCTCTGTCTGCTCTGATG
rJMSF007B05+ ACTGCGGTCCA-GTGAGGTATCAAACAAGTTCTACTTCACATTCTCTGTCTGCTCTGATG
rJMSF044M10+ ACTGCGGTCCA-GTGAGGTATCAAACAAGTTCTACTTCACATTCTCTGTCTGCTCTGATG
rJMSF043M10+ ACTGCGGTCCA-GTGAGGTATCAAACAAGTTCTACTTCACATTCTCTGTCTGCTCTGATG
rJMSF037E19+ ACTGCGGTCCA-GTGAGGTATCAAACAAGTTCTACTTCACATTCTCTGTCTGCTCTGATG
____________________________________________________________
consensus ACTGCGGTCCA-GTGAGGTATCAAACAAGTTCTACTTCACATTCTCTGTCTGCTCTGATG
. : . : . : . : . : . :
rJMFF008P24+ CACTGGAAAATGGTCCGAGGATTCGGACTGTTGTTCCTGCCACGGAGGAGGAAGCACGTC
rJMSF007B05+ CACTGGAAAATGGTCCGAGGATTCGGACTGTTGTTCCTGCCACGGAGGAGGAAGCACGTC
rJMSF044M10+ CACTGGAAAATGGTCCGAGGATTCGGACTGTTGTTCCTGCCACGGAGGAGGAAGCACGTC
rJMSF043M10+ CACTGGAAAATGGTCCGAGGATTCGGACTGTTGTTCCTGCCACGGAGGAGGAAGCACGTC
rJMSF037E19+ CACTGGGAAATGGTCCGAGGATTCGGACTGTTGTTCCTGCCACGGAGGAGGAAGCACGTC
rJMFF048A10+ TCCGAGGATTCGGACTGTTGTTCCTGCCACGGAGGAGGAAGCACGTC
____________________________________________________________
consensus CACTGGAAAATGGTCCGAGGATTCGGACTGTTGTTCCTGCCACGGAGGAGGAAGCACGTC
. : . : . : . : . : . :
rJMFF008P24+ GTGTAATTGAGCGCATGGATGCCGAAAAATGTTGTTAATGTTAAAAACTGCGCCATTGCA
rJMSF007B05+ GTGTAATTGAGCGCATGGATGCCGAAAAATGTTGTTAATGTTAAAAACTGCGCCATTGCA
rJMSF044M10+ GTGTAATTGAGCGCATGGATGCCGAAAAATGTTGTTAATGTTAAAAACTGCGCCATTGCA
rJMSF043M10+ GTGTAATTGAGCGCATGGATGCCGAAAAATGTTGTTAATGTTAAAAACTGCGCCATTGCA
rJMSF037E19+ GTGTAATTGAGCGCATGGATGCCGAAAAATGTTGTTAATGTTAAAAACTGCGCCATTGCA
rJMFF048A10+ GTGTAATTGAGCGCATGGATGCCGAAAAATGTTGTTAATGTTAAAAACTGCGCCATTGCA
____________________________________________________________
consensus GTGTAATTGAGCGCATGGATGCCGAAAAATGTTGTTAATGTTAAAAACTGCGCCATTGCA
. : . : . : . : . : . :
rJMFF008P24+ GGACATCATGAGGTTCATATTTTCATCATTTCTGCATGAGGGTATTTGGATAATTTGGTT
rJMSF007B05+ GGACATCATGAGGTTCATATTTTCATCATTTCTGCATGAGGGTATTTGGATAATTTGGTT
rJMSF044M10+ GGACATCATGAGGTTCATATTTTCATCATTTCTGCATGAGGGTATTTGGATAATTTGGTT
rJMSF043M10+ GGACATCATGAGGTTCATATTTTCATCATTTCTGCATGAGGGTATTTGGATAATTTGGTT
rJMSF037E19+ GGACATCATGAGGTTCATATTTTCATCATTTCTGCATGAGGGTATTTGGATAATTTGGTT
rJMFF048A10+ GGACATCATGAGGTTCATATTTTCATCATTTCTGCATGAGGGTATTTGGATAATTTGGTT
____________________________________________________________
consensus GGACATCATGAGGTTCATATTTTCATCATTTCTGCATGAGGGTATTTGGATAATTTGGTT
. : . : . : . : . : . :
rJMFF008P24+ CATGCTATTTGGCTTTATGGTAGTAATTATTTTGGGATTTA-TGTATATAGAATCTTTTT
rJMSF007B05+ CATGCTATTTGGCTTTATGGTAGTAATTATTTTGGGATTTA-TGTATATAGAATCTTTTT
rJMSF044M10+ CATGCTATTTGGCTTTATGGTAGTAATTATTTTGGGANTTACTGTATATAGAATCTTTTT
rJMSF043M10+ CATGCTATTTGGCTTTATGGTAGTAATTATTTTGGGATTTA-TGTATATAGAATCTTTTT
rJMSF037E19+ CATGCTATTTGGCTTTATGGTAGTAATTATTTTGGGATTTA-TGTATATAGAATCTTTTT
rJMFF048A10+ CATGCTATTTGGCTTTATGGTAGTAATTATTTTGGGATTTA-TGTATATAGAATCTTTTT
____________________________________________________________
consensus CATGCTATTTGGCTTTATGGTAGTAATTATTTTGGGATTTA-TGTATATAGAATCTTTTT
. : . : . : . : . : . :
rJMFF008P24+ TCCTAGCTGAATAAATCAAGTTTAGCTAGTGTAGAATATACTTGTTCACCAAAGAAGT
rJMSF007B05+ TCCTAGCTGAATAAATCAAGTTTAGCTAGTGTAGAATATACTTGTTCACCAAAGAAGTTG
rJMSF044M10+ TCCTA
rJMSF043M10+ TCCTAGCTGAATAAATCAAGTTTAGCTAGTGTAGAATATACTTGTTCACCAAAGAAGTTG
rJMSF037E19+ TCCTAGCTGAATAAATCAAGTTTAGCTAGTGTAGAATATACTTGTTCACCAAAGAAGTTG
rJMFF048A10+ TCCTAGCTGAATAAATCAAGTTTAGCTAGTGTAGAATATACTTGTTCACCAAAGAAGTTG
____________________________________________________________
consensus TCCTAGCTGAATAAATCAAGTTTAGCTAGTGTAGAATATACTTGTTCACCAAAGAAGTTG
. : . : . : . : . : . :
rJMSF007B05+ GATATTTCCTGATTTGATTGTAAACCTATCCCTCGTATAATC
rJMSF043M10+ GATATTTCCTGATTTGATTGTAAACCTATCCCTCGTATAATC
rJMSF037E19+ GATATTTCCTGATTTGATTGTAAACCTATCCCTCGTATAATC
rJMFF048A10+ GATATTTCCTGATTTGATTGTAAACCTATCCCTCGTATAATCAGGGGTTATCATGCCTTT
____________________________________________________________
consensus GATATTTCCTGATTTGATTGTAAACCTATCCCTCGTATAATCAGGGGTTATCATGCCTTT
. : . : . : . : . : . :
rJMFF048A10+ ATGGCTTTATTTAGTAAACATTTGTTTTTTTCCAAAAAAAAAAAAAAAACTCTCCAGGGT
____________________________________________________________
consensus ATGGCTTTATTTAGTAAACATTTGTTTTTTTCCAAAAAAAAAAAAAAAACTCTCCAGGGT