| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF014C03 | Sequence | 593 | 000267 (7) | ref|XP_009590977.1| | 6e-44 | PREDICTED: BES1/BZR1 homolog protein 4-like [Nicotiana tomentosiformis] | 498 | 001223 (6) | gb|EYU28126.1| | 5e-21 | hypothetical protein MIMGU_mgv1a007967mg [Erythranthe guttata] |
| JMFF036C21 | Sequence | 592 | 000267 (7) | ref|XP_009590977.1| | 6e-44 | PREDICTED: BES1/BZR1 homolog protein 4-like [Nicotiana tomentosiformis] | 575 | 001223 (6) | ref|XP_004234074.1| | 2e-49 | PREDICTED: BES1/BZR1 homolog protein 4 isoform X1 [Solanum lycopersicum] ref|XP_ |
| JMFF043A21 | Sequence | 647 | 000267 (7) | ref|XP_009590977.1| | 2e-58 | PREDICTED: BES1/BZR1 homolog protein 4-like [Nicotiana tomentosiformis] | 295 | 001223 (6) | |||
| JMFF044F23 | Sequence | 638 | 000267 (7) | gb|AEA86340.1| | 1e-53 | BES1/BZR1-like protein [Solanum nigrum] | 626 | 001223 (6) | ref|XP_004234074.1| | 3e-62 | PREDICTED: BES1/BZR1 homolog protein 4 isoform X1 [Solanum lycopersicum] ref|XP_ |
| JMFF047P18 | Sequence | 638 | 000267 (7) | gb|AEA86340.1| | 3e-53 | BES1/BZR1-like protein [Solanum nigrum] | 552 | 001223 (6) | ref|XP_009590977.1| | 2e-45 | PREDICTED: BES1/BZR1 homolog protein 4-like [Nicotiana tomentosiformis] |
| JMFF051L01 | Sequence | 628 | 000267 (7) | ref|XP_009590977.1| | 6e-44 | PREDICTED: BES1/BZR1 homolog protein 4-like [Nicotiana tomentosiformis] | 308 | 001223 (6) | |||
This contig is upended
. : . : . : . : . : . :
rJMFF036C21+ ACCTGATTCCGGGTGGCTTTCCGGTGTACAA
rJMFF044F23+ CTGATTCCGGGTGGCTTTCCGGTGTACAA
____________________________________________________________
consensus ACCTGATTCCGGGTGGCTTTCCGGTGTACAA
. : . : . : . : . : . :
rJMFF036C21+ ACCCCACAAGATGGACCTTCATCCCCAACATTTAGCCTTGTCTCACCAAACCCATTTGGC
rJMFF044F23+ ACCCCACAAGATGGACCTTCATCCCCAACATTTAGCCTTGTCTCACCAAACCCATTTGGC
rJMFF014C03+ AAACCCATTTGGN
rJMFF047P18+ AAACCCATTTGGC
____________________________________________________________
consensus ACCCCACAAGATGGACCTTCATCCCCAACATTTAGCCTTGTCTCACCAAACCCATTTGGC
. : . : . : . : . : . :
rJMFF036C21+ TTTAAGGAGCCACTATCAAATGGTGGATCNC-GAATGTGGACCCCAGGGCAGAGTGGAAC
rJMFF044F23+ TTTAAGGAGCCACTATCAAATGGTGGATCAC-GAATGTGGACCCCAGGGCAGAGTGGAAC
rJMFF014C03+ TCTAAGGANCCNCTATCAAATGGTGGATCNCTGAATGTGGACCCCAGGGCAGAGTGGAAC
rJMFF047P18+ TTTAAGGAGCCACTATCAAATGGTGGATCAC-GAATGTGGACCCCAGGGCAGAGTGGAAC
____________________________________________________________
consensus TTTAAGGAGCCACTATCAAATGGTGGATCAC-GAATGTGGACCCCAGGGCAGAGTGGAAC
. : . : . : . : . : . :
rJMFF036C21+ ATGCTCGCCCGCAGTTGCAGCAGCTNTTGACCGTTCAGCTGATGTACCCATGTCAGATGC
rJMFF044F23+ ATGCTCGCCCGCAGTTGCAGCAGCTCTTGACCGTTCAGCTGATGTACCCATGTCAGATGC
rJMFF014C03+ ATGCTCGCCCGCAGTTGCAGCAGCTNTTGACCGTTCAGCTGATGTACCCATGTCAGATGC
rJMFF047P18+ ATGCTCGCCCGCAGTTGCAGCAGCTCTTGACCGTTCAGCTGATGTACCCATGTCAGATGC
____________________________________________________________
consensus ATGCTCGCCCGCAGTTGCAGCAGCTCTTGACCGTTCAGCTGATGTACCCATGTCAGATGC
. : . : . : . : . : . :
rJMFF036C21+ AATTCAAGCTGAGTTTGCGTTTGGCAGCAACGCTATGGGTATAGTTAAGCCATGGGAAGG
rJMFF044F23+ AATTCAAGCTGAGTTTGCGTTTGGCAGCAACGCTATGGGTATAGTTAAGCCATGGGAAGG
rJMFF014C03+ AATTCAAGNTGAGTTTGCGTTTGGCAGCAACGCTATGGGTATAGTTAAGCCATGGGAAGG
rJMFF047P18+ AATTCAAGCTGAGTTTGCGTTTGGCAGCAACGCTATGGGTATAGTTAAGCCATGGGAAGG
____________________________________________________________
consensus AATTCAAGCTGAGTTTGCGTTTGGCAGCAACGCTATGGGTATAGTTAAGCCATGGGAAGG
. : . : . : . : . : . :
rJMFF036C21+ AGAACGAATTCATGAAGAATGTATCACTGATGATNTCGAGNTAACTNTTGGGAACTCCAA
rJMFF044F23+ AGAACGAATTCATGAAGAATGTATCACTGATGATCTCGAGCTAACTCTTGGGAACTCCAA
rJMFF014C03+ AGAACGAATTCATGAAGAATGTATCNCTGATGATNTCGAGCTAACTNTTGGGAACTCCAA
rJMFF051L01+ GGAACTCCAC
rJMFF047P18+ AGAACGAATTCATGAAGAATGTATCACTGATGATCTCGAGCTAACTCTTGGGAACTCCAA
____________________________________________________________
consensus AGAACGAATTCATGAAGAATGTATCACTGATGATCTCGAGCTAACTCTTGGGAACTCCAA
. : . : . : . : . : . :
rJMFF036C21+ CNCTCGATAAGGTGTTGAAGGCAGAGTAAAAATACAGAGTAGGAGCATTTCTTTGTTTGT
rJMFF044F23+ CACTCGATAAGGTGTTGAAGGCAGAGTAAAAATACAGAGTAGGAGCATTTCTTTGTTTGT
rJMFF014C03+ CNCTCGATAAGGTGTTGAAGGCAGAGTAAAAATACAGAGTAGGAGCATTTCTTTGTTTGT
rJMFF043A21+ TCGATAAGGTGTTGAAGGCAGAGTAAAAATCCAGAGTAGGAGCATTTCTTTGTTTGT
rJMFF051L01+ CCCTCGATAAGGTGTTGAAGGCAGAGTAAAAATCCAGAGTGGGAGCATTTCTTTGTTGGT
rJMFF047P18+ CACTCGATAAGGTGTTGAAGGCAGAGTAAAAATACAGAGTAGGAGCATTTCTTTGTTTGT
____________________________________________________________
consensus CACTCGATAAGGTGTTGAAGGCAGAGTAAAAATACAGAGTAGGAGCATTTCTTTGTTTGT
. : . : . : . : . : . :
rJMFF036C21+ TAATTTTTTTTTT--GTCTTTTTTCTTCTTCTTTTCCAAAAGAAAACCGTAGATTGAACT
rJMFF044F23+ TAATTTTTTTTTT--GTCTTTTTTCTTCTTCTTTTCCAAAAGAAAACCGTAGATTGAACT
rJMFF014C03+ TAATTTTTTTTTT--GTCTTTTTTCTTCTTCTTTTCCAAAAGAAAACCGTAGATTGAACT
rJMFF043A21+ TAATTTTTTTTTTTGGTCTTTTTTCTTCTTCTTTTCCAAAAGAAAACCGTAGATTGAACT
rJMFF051L01+ TAATTTTTTTTTTTGGTCTTTTTTCTTCTTCTTTGCCAAAAGAAAACCGTAGATTGAACT
rJMFF047P18+ TAATTTTTTTTTT--GTCTTTTTTCTTCTTCTTTTCCAAAAGAAAACCGTAGATTGAACT
____________________________________________________________
consensus TAATTTTTTTTTT--GTCTTTTTTCTTCTTCTTTTCCAAAAGAAAACCGTAGATTGAACT
. : . : . : . : . : . :
rJMFF036C21+ ATGAATTGCTCATTTGATGGCTTTATCCTAAACTCCTGTTTGTTGGGAGTATCCATTTTC
rJMFF044F23+ ATGAATTGCTCATTTGATGGCTTTATCCTAAACTCCTGTTTGTTGGGAGTATCCATTTTC
rJMFF014C03+ ATGAATTGCTCATTTGATGGCTTTATCCTAAACTCCTGTTTGTTGGGAGTATCCATTTTC
rJMFF043A21+ ATGAATTGCTCATTTGATGGCTTTATCCTAAACTCCTGTTTGTTGGGAGTATCCATTTTC
rJMFF051L01+ ATGAATTGCTCATTTGATGGCTTTATCCTAAACTCCTGTTTGTTGGGAGTATCCATTTTC
rJMFF047P18+ ATGAATTGCTCATTTGATGGCTTTATCCTAAACTCCTGTTTGTTGGGAGTATCCATTTTC
____________________________________________________________
consensus ATGAATTGCTCATTTGATGGCTTTATCCTAAACTCCTGTTTGTTGGGAGTATCCATTTTC
. : . : . : . : . : . :
rJMFF036C21+ TTCTTGTAATTTTTTTTCTTCAAATTCTTTTTTCTTCTTCCTTTCCCTTGAAGGTGAGGA
rJMFF044F23+ TTCTTGTAATTTTTTTTCTTCAAATTCTTTTTTCTTCTTCCTTTCCCTTGAAGGTGAGGA
rJMFF014C03+ TTCTTGTAATTTTTTTTCTTCAAATTCTTTTTTCTTCTTCCTTTCCCT
rJMFF043A21+ TTCTTGTAA-TTTTTTTCTTCAAATTCTTTTTTCTTCTTCCTTTCCCTTGAAGGTGAGGA
rJMFF051L01+ TTCTTGTAA-TTTTTTTCTTCAAATTCTTTTTTCTTCTTCCTTTCCCTTGAAGGTGAGGA
rJMFF047P18+ TTCTTGTAATTTTTTTTCTTCAAATTCTTTTTTCTTCTTCCTTTCCCTTGAAGGTGAGGA
____________________________________________________________
consensus TTCTTGTAATTTTTTTTCTTCAAATTCTTTTTTCTTCTTCCTTTCCCTTGAAGGTGAGGA
. : . : . : . : . : . :
rJMFF036C21+ AGTGACT
rJMFF044F23+ AGTGACTTTTATGTAGTTCCCCGTTTTGTAAGTA
rJMFF043A21+ AGTGACTTTTATGTAGTTCCCCGTTTTGTAAGTA
rJMFF051L01+ AGTGACTTTTATGTAGTTCCCCGTTTTGTAAGTA
rJMFF047P18+ AGTGACTTTTATGTAGTTCCCCGTTTTGTAAGTAAAAAAAAAAAAAAAACTCTCCAGGGT
____________________________________________________________
consensus AGTGACTTTTATGTAGTTCCCCGTTTTGTAAGTAAAAAAAAAAAAAAAACTCTCCAGGGT