Contig 001220:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047H18Sequence602010319 (3)ref|XP_009777886.1|4e-12PREDICTED: probable plastidic glucose transporter 3 [Nicotiana sylvestris] ref|588001220 (3)
JMSF004D19Sequence297022016170001220 (3)
JMSF030E21Sequence651010319 (3)632001220 (3)ref|XP_008353709.1|1e-42PREDICTED: probable plastidic glucose transporter 2 [Malus domestica]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF030E21+ CTGGGCCAGTACCTAGTCTTCTCCTGTCAGAGATATTCCCTGGGCGGATTAGGGCAA
                      ____________________________________________________________
consensus CTGGGCCAGTACCTAGTCTTCTCCTGTCAGAGATATTCCCTGGGCGGATTAGGGCAA
 
. : . : . : . : . : . :
rJMSF030E21+ AGGCAATGGCTATCTGCATGGCTGTGCATTGGGTCATAAATTTTTTCGTTGGTCTTTTGT
                      ____________________________________________________________
consensus AGGCAATGGCTATCTGCATGGCTGTGCATTGGGTCATAAATTTTTTCGTTGGTCTTTTGT
 
. : . : . : . : . : . :
rJMSF030E21+ TTCTCCGTATGCTAGAACAACTTGGGCCGCAAGTTGTGTATACAACGTTTGCCTCATTTT
                      ____________________________________________________________
consensus TTCTCCGTATGCTAGAACAACTTGGGCCGCAAGTTGTGTATACAACGTTTGCCTCATTTT
 
. : . : . : . : . : . :
rJMSF030E21+ GCTTGATAGCAGTGGTCTTTGTGCGGAAGAATGTGGTGGAAACGAAGGGGAAAACACTTC
                      ____________________________________________________________
consensus GCTTGATAGCAGTGGTCTTTGTGCGGAAGAATGTGGTGGAAACGAAGGGGAAAACACTTC
 
. : . : . : . : . : . :
rJMSF030E21+ AAGAAATCGAGTTTGCCCTCGTCCTGTCTCATTAGTTTGGGGATGGATCTATGCACATCC
                      ____________________________________________________________
consensus AAGAAATCGAGTTTGCCCTCGTCCTGTCTCATTAGTTTGGGGATGGATCTATGCACATCC
 
. : . : . : . : . : . :
rJMSF030E21+ CAGCTGTTTGTGAATCAGTACATTGGACACAGGTACAGAACCCTCCGTTCTCATATGCAC
                      ____________________________________________________________
consensus CAGCTGTTTGTGAATCAGTACATTGGACACAGGTACAGAACCCTCCGTTCTCATATGCAC
 
. : . : . : . : . : . :
rJMSF030E21+ CAATTACTCTCGCCATTCAATGCAGGATGTGGACTCTAGAATCTGCAATGCTCTTCAGTG
                      ____________________________________________________________
consensus CAATTACTCTCGCCATTCAATGCAGGATGTGGACTCTAGAATCTGCAATGCTCTTCAGTG
 
. : . : . : . : . : . :
rJMSF030E21+ TGGAGGTCTGTGCATGCATACTCTACTACTAGTATAGTATATATACACAAAACAAGTACG
rJMFF047H18+ GCATGCATACTCTACTACTAGTATAGTATATATACACAACACAAGTACG
                      ____________________________________________________________
consensus TGGAGGTCTGTGCATGCATACTCTACTACTAGTATAGTATATATACACAACACAAGTACG
 
. : . : . : . : . : . :
rJMSF030E21+ CATATTTATAGGGTAAATGGGACGTGTGATATTAGTCACAGTGACAATGTGAGGTTGTGT
rJMFF047H18+ CATATTTATAGGGTAAATGGGACGTGTGATATTAGTCACAGTGACAATGTGAGGTTGTGT
                      ____________________________________________________________
consensus CATATTTATAGGGTAAATGGGACGTGTGATATTAGTCACAGTGACAATGTGAGGTTGTGT
 
. : . : . : . : . : . :
rJMSF030E21+ ACAAGTAGGAAAATAGCGTAAGATCAGCTCCTCATTAGTGTCCATGAATAATAGTTTGGT
rJMSF004D19+ TGAATAATAGTTTGGT
rJMFF047H18+ ACAAGTAGGAAAATAGCGTAAGATCAGCTCCTCATTAGTGTCCATGAATAATAGTTTGGT
                      ____________________________________________________________
consensus ACAAGTAGGAAAATAGCGTAAGATCAGCTCCTCATTAGTGTCCATGAATAATAGTTTGGT
 
. : . : . : . : . : . :
rJMSF030E21+ GTGGGATGCCCTTAGCTTGGGTTCCAGATAATAGT
rJMSF004D19+ GTGGGATGCCCTTAGCATGGGNTCCAGATAATAGTTGGAGTGATGCAAGAAACNCAAATA
rJMFF047H18+ GTGGGATGCCCTTAGCTTGGGTTCCAGATAATAGTTGGAGTGATGCAAGAAACACAAATA
                      ____________________________________________________________
consensus GTGGGATGCCCTTAGCTTGGGTTCCAGATAATAGTTGGAGTGATGCAAGAAACACAAATA
 
. : . : . : . : . : . :
rJMSF004D19+ ATTCCTCCCNTACCNTTACACTTTGTAACACNAGAATTCTTNAGACTTTNTTTTTTGAAA
rJMFF047H18+ ATTCCTCCATTACCATTACA-TTTGTAACACAAGAATTCTTGAGACTTTTTTTTTTGAAA
                      ____________________________________________________________
consensus ATTCCTCCCTTACCATTACACTTTGTAACACAAGAATTCTTGAGACTTTTTTTTTTGAAA
 
. : . : . : . : . : . :
rJMSF004D19+ TATTGTTACTCGGTNTCATGCGGGAAATTT
rJMFF047H18+ TATTGTTACTCGGTTTCATGCGGGAAATTTTGTAATGGGATTTCAGGCACTATATTTATC
                      ____________________________________________________________
consensus TATTGTTACTCGGTTTCATGCGGGAAATTTTGTAATGGGATTTCAGGCACTATATTTATC
 
. : . : . : . : . : . :
rJMFF047H18+ AGTTCTTATTTTTAAGTCTACTTGGCATACCTCCTTTTACTTATGTATCTCTAGGAGTGA
                      ____________________________________________________________
consensus AGTTCTTATTTTTAAGTCTACTTGGCATACCTCCTTTTACTTATGTATCTCTAGGAGTGA
 
. : . : . : . : . : . :
rJMFF047H18+ GATTAGATGCGGACAGGTTGCTAGGTGTGAACACGTGGGATGTACTGGCAAGCAATTATG
                      ____________________________________________________________
consensus GATTAGATGCGGACAGGTTGCTAGGTGTGAACACGTGGGATGTACTGGCAAGCAATTATG
 
. : . : . : . : . : . :
rJMFF047H18+ CATTGTAAAGTATGTCTAAATGCATAGTGCACTTCTTGATTCTCATTGATTGTCAAGTCT
                      ____________________________________________________________
consensus CATTGTAAAGTATGTCTAAATGCATAGTGCACTTCTTGATTCTCATTGATTGTCAAGTCT
 
. : . : . : . : . : . :
rJMFF047H18+ CAGACATTTAGAAATTAAAAATGCTTGACGGTGTAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus CAGACATTTAGAAATTAAAAATGCTTGACGGTGTAAAAAAAAAAAAAAACTCTCCAGGGT