Contig 001219:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF036J24Sequence505001734 (4)ref|XP_006363581.1|1e-56PREDICTED: COBRA-like protein 7-like [Solanum tuberosum]684001219 (4)ref|XP_006363581.1|2e-69PREDICTED: COBRA-like protein 7-like [Solanum tuberosum]
JMFF046F16Sequence460001734 (4)ref|XP_006363581.1|4e-49PREDICTED: COBRA-like protein 7-like [Solanum tuberosum]383001219 (4)emb|CDO98803.1|2e-12unnamed protein product [Coffea canephora]
JMFF047C17Sequence488001734 (4)ref|XP_006363581.1|1e-53PREDICTED: COBRA-like protein 7-like [Solanum tuberosum]373001219 (4)
JMSF043G05Sequence748001734 (4)ref|XP_006363581.1|1e-117PREDICTED: COBRA-like protein 7-like [Solanum tuberosum]786001219 (4)ref|XP_006363581.1|4e-89PREDICTED: COBRA-like protein 7-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF043G05+ CCCGCCAATACAGCCAGCACTTGTAGCACCAAAGCGCCCGCGCTTCTCCTCCCCGCCCA
                      ____________________________________________________________
consensus CCCGCCAATACAGCCAGCACTTGTAGCACCAAAGCGCCCGCGCTTCTCCTCCCCGCCCA
 
. : . : . : . : . : . :
rJMSF043G05+ GTCCCTGTTGGTTCCTTTCGAGAACAGGACTAAATTGTCCTTAGCCTGGGCCGGGATTAA
                      ____________________________________________________________
consensus GTCCCTGTTGGTTCCTTTCGAGAACAGGACTAAATTGTCCTTAGCCTGGGCCGGGATTAA
 
. : . : . : . : . : . :
rJMSF043G05+ CCATTTCCCCGTCCCGAACCCTCTACCGTGTCCAGATAACTGCGGCGTTAGTATCAACTG
rJMFF036J24+ GTCCAGATAACTGCGGCGTTAGTATCAACTG
                      ____________________________________________________________
consensus CCATTTCCCCGTCCCGAACCCTCTACCGTGTCCAGATAACTGCGGCGTTAGTATCAACTG
 
. : . : . : . : . : . :
rJMSF043G05+ GCATTTGTTCACGGACTACCGGGGCGGGTGGTCTGCCCGGATCACGCTCTTCAACTGGGA
rJMFF036J24+ GCATTTGTTCACGGACTACCGGGGCGGGTGGTCTGCCCGGATCACGCTCTTCAACTGGGA
                      ____________________________________________________________
consensus GCATTTGTTCACGGACTACCGGGGCGGGTGGTCTGCCCGGATCACGCTCTTCAACTGGGA
 
. : . : . : . : . : . :
rJMSF043G05+ CGACTCTGCATTCGCCGATTGGTTCGCCGCAATTGAATTGGACAAAGCTGCCCCCGGCTT
rJMFF036J24+ CGACTCTGCATTCGCCGATTGGTTCGCCGCAATTGAATTGGACAAAGCTGCCCCCGGCTT
                      ____________________________________________________________
consensus CGACTCTGCATTCGCCGATTGGTTCGCCGCAATTGAATTGGACAAAGCTGCCCCCGGCTT
 
. : . : . : . : . : . :
rJMSF043G05+ CGAGAAGGTCTATTCCTTCAACGGGAGCACACTAAGTGGCGTGGACAACACGATTTTCAT
rJMFF036J24+ CGAGAAGGTCTATTCCTTCAACGGGAGCACACTAAGTGGCGTGGACAACACGATTTTCAT
                      ____________________________________________________________
consensus CGAGAAGGTCTATTCCTTCAACGGGAGCACACTAAGTGGCGTGGACAACACGATTTTCAT
 
. : . : . : . : . : . :
rJMSF043G05+ GCAGGGCCTTCCCGGGTTGAACTATTTGGTAGGAGAGGCAGACGGGGCGAATCCTGAGAG
rJMFF036J24+ GCAGGGCCTTCCCGGGTTGAACTATTTGGTAGGAGAGGCAGACGGGGCGAATCCTGAGAG
                      ____________________________________________________________
consensus GCAGGGCCTTCCCGGGTTGAACTATTTGGTAGGAGAGGCAGACGGGGCGAATCCTGAGAG
 
. : . : . : . : . : . :
rJMSF043G05+ GGATCCCAGAGTACCAGGTAAACAGCAGTCTGTAATTTCGTTCTCGAAGAAGAACATTCC
rJMFF036J24+ GGATCCCAGAGTACCAGGTAAACAGCAGTCTGTAATTTCGTTCTCGAAGAAGAACATTCC
rJMFF046F16+ GAACATTCC
                      ____________________________________________________________
consensus GGATCCCAGAGTACCAGGTAAACAGCAGTCTGTAATTTCGTTCTCGAAGAAGAACATTCC
 
. : . : . : . : . : . :
rJMSF043G05+ CGGTATCAACGTGGCTGCTGGTGACGGGTTCCCGACCAAGGTGTTCTTCAATGGAGAAGA
rJMFF036J24+ CGGTATCAACGTGGCTGCTGGTGACGGGTTCCCGACCAAGGTGTTCTTCAATGGAGAAGA
rJMFF046F16+ CGGTATCAACGTGGCTGCTGGTGACGGGTTCCCGACCAAGGTGTTCTTCAATGGAGAAGA
rJMFF047C17+ TCAATGGAGAAGA
                      ____________________________________________________________
consensus CGGTATCAACGTGGCTGCTGGTGACGGGTTCCCGACCAAGGTGTTCTTCAATGGAGAAGA
 
. : . : . : . : . : . :
rJMSF043G05+ GTGTTCACTGCCGAAAATTCTCCCGAAAAGCGGGTCATTTAGAGTGAGCTCATCCATGCT
rJMFF036J24+ GTGTTCACTGCCGAAAATTCTCCCGAAAAGCGGGTCATTTAGAGTGAGCTCATCCATGCT
rJMFF046F16+ GTGTTCACTGCCGAAAATTCTCCCGAAAAGCGGGTCATTTAGAGTGAGCTCATCCATGCT
rJMFF047C17+ GTGTTCACTGCCGAAAATTCTCCCGAAAAGCGGGTCATTTAGAGTGAGCTCATCCATGCT
                      ____________________________________________________________
consensus GTGTTCACTGCCGAAAATTCTCCCGAAAAGCGGGTCATTTAGAGTGAGCTCATCCATGCT
 
. : . : . : . : . : . :
rJMSF043G05+ CACTTCCACCATCCTTGCTCTCCTGGTCTTCATGTTGTTAAGACTATAAACTGCACTGTC
rJMFF036J24+ CACTTCCACCATCCTTGCTCTCCTGGTCTTCATGTTGTTAAGACTATAAACTGCACTGTC
rJMFF046F16+ CACTTCCACCATCCTTGCTCTCCTGGTCTTCATGTTGTTAAGACTATAAACTGCACTGTC
rJMFF047C17+ CACTTCCACCATCCTTGCTCTCCTGGTCTTCATGTTGTTAAGACTATAAACTGCACTGTC
                      ____________________________________________________________
consensus CACTTCCACCATCCTTGCTCTCCTGGTCTTCATGTTGTTAAGACTATAAACTGCACTGTC
 
. : . : . : . : . : . :
rJMSF043G05+ TTATTTCTTCATTCTTTAGACTGATTGTGGAGTCTTCAAGCTATACACCCAGAAGACAAA
rJMFF036J24+ TTATTTCTTCATTCTTTAGACTGATTGTGGAGTCTTCAAGCTATACACCCAGAAGACAAA
rJMFF046F16+ TTATTTCTTCATTCTTTAGACTGATTGTGGAGTCTTCAAGCTATACACCCAGAAGACAAA
rJMFF047C17+ TTATTTCTTCATTCTTTAGACTGATTGTGGAGTCTTCAAGCTATACACCCAGAAGACAAA
                      ____________________________________________________________
consensus TTATTTCTTCATTCTTTAGACTGATTGTGGAGTCTTCAAGCTATACACCCAGAAGACAAA
 
. : . : . : . : . : . :
rJMSF043G05+ TGATTGTATGTAATTTTTGTGCAAAGGATTTTGCCACTCAGTTCTCTGAGTCCAATTTGT
rJMFF036J24+ TGATTGTATGTAATTTTTGTGCAAAGGATTTTGCCACTCAGTTCTCTGAGTCCAATTTGT
rJMFF046F16+ TGATTGTATGTAATTTTTGTGCAAAGGATTTTGCCACTCAGTTCTCTGAGTCCAATTTGT
rJMFF047C17+ TGATTGTATGTAATTTTTGTGCAAAGGATTTTGCCACTCAGTTCTCTGAGTCCAATTTGT
                      ____________________________________________________________
consensus TGATTGTATGTAATTTTTGTGCAAAGGATTTTGCCACTCAGTTCTCTGAGTCCAATTTGT
 
. : . : . : . : . : . :
rJMSF043G05+ GTAGGCT
rJMFF036J24+ GTAGGCTGATATACATGATGTAATCATTGACATCTAATACCGCTTATTTCAAT
rJMFF046F16+ GTAGGCTGATATACATGATGTAATCATTGACATCTAATACCGCTTATTTCAATTCTTCAG
rJMFF047C17+ GTAGGCTGATATACATGATGTAATCATTGACATCTAATACCGCTTATTTCAATTCTTCAG
                      ____________________________________________________________
consensus GTAGGCTGATATACATGATGTAATCATTGACATCTAATACCGCTTATTTCAATTCTTCAG
 
. : . : . : . : . : . :
rJMFF046F16+ TTTCATTTTTTTTT
rJMFF047C17+ TTTCATTTTTTTTTXXXXXXXXXXXXXXXXXXGAAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus TTTCATTTTTTTTTNNNNNNNNNNNNNNNNNNGAAAAAAAAAAAAAAAACTCTCCAGGGT