Contig 001218:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016K12Sequence592000079 (5)749001218 (5)emb|CBI19906.3|2e-108unnamed protein product [Vitis vinifera]
JMFF031C01Sequence567000079 (5)684001218 (5)emb|CBI19906.3|3e-94unnamed protein product [Vitis vinifera]
JMFF047A04Sequence463000079 (5)378001218 (5)emb|CBI19906.3|2e-28unnamed protein product [Vitis vinifera]
JMFN005C21Sequence615001218 (5)emb|CDP07369.1|3e-110unnamed protein product [Coffea canephora]
JMSF041I06Sequence731000079 (5)dbj|BAJ53102.1|2e-07JHL20J20.9 [Jatropha curcas] gb|KDP36892.1| hypothetical protein JCGZ_08183 [Jat614001218 (5)emb|CBI19906.3|7e-80unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


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JMFN005C21-                        AGACATAGAACCAAGGCGTATCAGGCTGAAGTCAAGTAGTTATACCA
                      ____________________________________________________________
consensus                          AGACATAGAACCAAGGCGTATCAGGCTGAAGTCAAGTAGTTATACCA
 
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JMFN005C21-           CCAACACCCTCTTAGACACTGTTACAGCTGCTACTATACAGTTTAAGGAGATGGGTGGAA
rJMFF016K12+                     TTAGACACTGTTACAGCTGCTACTATACAGTTTAAGGAGATGGGTGGAA
                      ____________________________________________________________
consensus             CCAACACCCTCTTAGACACTGTTACAGCTGCTACTATACAGTTTAAGGAGATGGGTGGAA
 
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JMFN005C21-           GAAGTAGGCCAGCTGAATCTCATAAGATGGCTGAACAGCCAGCTGAAAAGAAAAAAGCTT
rJMFF016K12+          GAAGTAGGCCAGCTGAATCTCATAAGATGGCTGAACAGCCAGCTGAAAAGAAAAAAGCTT
rJMFF031C01+                             TCATAAGATGGCTGAACAGCCAGCTGAAAAGAAAAAAGCTT
                      ____________________________________________________________
consensus             GAAGTAGGCCAGCTGAATCTCATAAGATGGCTGAACAGCCAGCTGAAAAGAAAAAAGCTT
 
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JMFN005C21-           TTGCCGATTGGCTTACTGCAATGAAGCCTGTCAATGAGGAGAAAGATCATTGGGTTCCTG
rJMSF041I06+                                                   AAAGATCATTGGGTTCCTG
rJMFF016K12+          TTGCCGATTGGCTTACTGCAATGAAGCCTGTCAATTAGGAGAAAGATCATTGGGTTCCTG
rJMFF031C01+          TTGCCGATTGGCTTACTGCAATGAAGCCTGTCAATGAGGAGAAAGATCATTGGGTTCCTG
                      ____________________________________________________________
consensus             TTGCCGATTGGCTTACTGCAATGAAGCCTGTCAATGAGGAGAAAGATCATTGGGTTCCTG
 
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JMFN005C21-           ATGAAGCAGTAACCAAGTGCACAGGTTGTGGGGCAGACTTTAGTGCTTTCAATCGAAAGC
rJMSF041I06+          ATGAAGCAGTAACCAAGTGCACAGGTTGTGGGGCAGACTTTAGTGCTTTCAATCGAAAGC
rJMFF016K12+          ATGAAGCAGTAACCAAGTGCACAGGTTGTGGGGCAGACTTTAGTGCTTTCAATCGAAAGC
rJMFF031C01+          ATGAAGCAGTAACCAAGTGCACAGGTTGTGGGGCAGACTTTAGTGCTTTCAATCGAAAGC
                      ____________________________________________________________
consensus             ATGAAGCAGTAACCAAGTGCACAGGTTGTGGGGCAGACTTTAGTGCTTTCAATCGAAAGC
 
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JMFN005C21-           ATCACTGCCGTAATTGTGGAGATATTTTCTGTGACAAGTGCACTCAAGGAAGAGTTGCAT
rJMSF041I06+          ATCACTGCCGTAATTGTGGAGATATTTTCTGTGACAAGTGCACTCAAGGAAGAGTTGCAT
rJMFF016K12+          ATCACTGCCGTAATTGTGGAGATATTTTCTGTGACAAGTGCACTCAAGGAAGAGTTGCAT
rJMFF031C01+          ATCACTGCCGTAATTGTGGAGATATTTTCTGTGACAAGTGCACTCAAGGAAGAGTTGCAT
                      ____________________________________________________________
consensus             ATCACTGCCGTAATTGTGGAGATATTTTCTGTGACAAGTGCACTCAAGGAAGAGTTGCAT
 
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JMFN005C21-           TGACAGCTGATGAAAATGCACCAGTTGTCCGAGTTTGCGAGCGATGCAAGAATGAGGTGT
rJMSF041I06+          TGACAGCTGATGAAAATGCACCAGTTGTCCGAGTTTGCGAGCGATGCAAGAATGAGGTGT
rJMFF016K12+          TGACAGCTGATGAAAATGCACCAGTTGTCCGAGTTTGCGAGCGATGCAAGAATGAGGTGT
rJMFF031C01+          TGACAGCTGATGAAAATGCACCAGTTGTCCGAGTTTGCGAGCGATGCAAGAATGAGGTGT
                      ____________________________________________________________
consensus             TGACAGCTGATGAAAATGCACCAGTTGTCCGAGTTTGCGAGCGATGCAAGAATGAGGTGT
 
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JMFN005C21-           CTCGCAGGTTAAGCAATGCTAAGGAAGCTGCAAGTAGACCTGTGCTGCAGAGTCATGAAG
rJMSF041I06+          CTCGCAGGTTAAGCAATGCTAAGGAAGCTGCAAGTAGACCTGTGCTGCAGAGTCATGAAG
rJMFF016K12+          CTCGCAGGTTAAGCAATGCTAAGGAAGCTGCAAGTAGACCTGTGCTGCAGAGTCATGAAG
rJMFF031C01+          CTCGCAGGTTAAGCAATGCTAAGGAAGCTGCAAGTAGACCTGTGCTGCAGAGTCATGAAG
rJMFF047A04+                                                    TGCTGCAGAGTCATGAAG
                      ____________________________________________________________
consensus             CTCGCAGGTTAAGCAATGCTAAGGAAGCTGCAAGTAGACCTGTGCTGCAGAGTCATGAAG
 
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JMFN005C21-           ACCTAGCTAAGAAGCTTCAGGAGGAGATGGAGAGAAACAGCAAGGCATCATCTGGCTCCA
rJMSF041I06+          ACCTAGCTAAGAAGCTTCAGGAGGAGATGGAGAGAAACAGCAAGGCATCATCTGGCTCCA
rJMFF016K12+          ACCTAGCTAAGAAGCTTCAGGAGGAGATGGAGAGAAACAGCAAGGCATCATCTGGCTCCA
rJMFF031C01+          ACCTAGCTAAGAAGCTTCAGGAGGAGATGGAGAGAAACAGCAAGGCATCATCTGGCTCCA
rJMFF047A04+          ACCTAGCTAAGAAGCTTCAGGAGGAGATGGAGAGAAACAGCAAGGCATCATCTGGCTCCA
                      ____________________________________________________________
consensus             ACCTAGCTAAGAAGCTTCAGGAGGAGATGGAGAGAAACAGCAAGGCATCATCTGGCTCCA
 
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JMFN005C21-           GGTCAGATGGTTTTGGAAGGCGGATGAAAGAGGTGGCCTGCCCTACTTGTACAGTTCATT
rJMSF041I06+          GGTCAGATGGTTTTGGAAGGCGGATGAAAGAGGTGGCCTGCCCTACTTGTACAGTTCATT
rJMFF016K12+          GGTCAGATGGTTTTGGAAGGCGGATGAAAGAGGTGGCCTGCCCTACTTGTACAGTTCATT
rJMFF031C01+          GGTCAGATGGTTTTGGAAGGCGGATGAAAGAGGTGGCCTGCCCTACTTGTACAGTTCATT
rJMFF047A04+          GGTCAGATGGTTTTGGAAGGCGGATGAAAGAGGTGGCCTGCCCTACTTGTACAGTTCATT
                      ____________________________________________________________
consensus             GGTCAGATGGTTTTGGAAGGCGGATGAAAGAGGTGGCCTGCCCTACTTGTACAGTTCATT
 
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JMFN005C21-           TGCAGGTTCAAGTCCCAAGCTCCGGTTC                                
rJMSF041I06+          TGCAGGTTCAAGTCCCAAGCTCCGGTTCAGAGACAATAGAATGCGGGGTTTGCCAACATC
rJMFF016K12+          TGCAGGTTCAAGTCCCAAGCTCCGGTTCAGAGACAATAGAATGCGGGGTTTGCCAACATC
rJMFF031C01+          TGCAGGTTCAAGTCCCAAGCTCCGGTTCAGAGACAATAGAATGCGGGGTTTGCCAACATC
rJMFF047A04+          TGCAGGTTCAAGTCCCAAGCTCCGGTTCAGAGACAATAGAATGCGGGGTTTGCCAACATC
                      ____________________________________________________________
consensus             TGCAGGTTCAAGTCCCAAGCTCCGGTTCAGAGACAATAGAATGCGGGGTTTGCCAACATC
 
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rJMSF041I06+          CATTCATCGTCAGTGCTCACTGATTTCATACTCTTCAGCGTCGTTGTTCAAACTAGCTTG
rJMFF016K12+          CATTCATCGTCAGTGCTCACTGATTTCATACTCTTCAGCGTCGTTGTTCAAACTAGCTTG
rJMFF031C01+          CATTCATCGTCAGTGCTCACTGATTTCATACTCTTCAGCGTCGTTGTTCAAACTAGCTTG
rJMFF047A04+          CATTCATCGTCAGTGCTCACTGATTTCATACTCTTCAGCGTCGTTGTTCAAACTAGCTTG
                      ____________________________________________________________
consensus             CATTCATCGTCAGTGCTCACTGATTTCATACTCTTCAGCGTCGTTGTTCAAACTAGCTTG
 
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rJMSF041I06+          TGTGATTGTGTTCTCTGTATCGGTGTTGATTTCTGTTCCTATCCTAGTTCTGTTGTATTT
rJMFF016K12+          TGTGATTGTGTTCTCTGTATCGGTGTTGATTTCTGTTCCTATCCTAGTTCTGTTGTATTT
rJMFF031C01+          TGTGATTGTGTTCTCTGTATCGGTGTTGATTTCTGTTCCTATCCTAGTTCTGTTGTATTT
rJMFF047A04+          TGTGATTGTGTTCTCTGTATCGGTGTTGATTTCTGTTCCTATCCTAGTTCTGTTGTATTT
                      ____________________________________________________________
consensus             TGTGATTGTGTTCTCTGTATCGGTGTTGATTTCTGTTCCTATCCTAGTTCTGTTGTATTT
 
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rJMSF041I06+          GCTGTT                                                      
rJMFF016K12+          GCTGTTTCACAGTTCCCATGAGTTGGTTTATCA                           
rJMFF031C01+          GCTGTTTCACAGTTCCCATGAGTTGGTTTATCA                           
rJMFF047A04+          GCTGTTTCACAGTTCCCATGAGTTGGTTTATCATACTCAACATTCATACTTGAAAAAAAG
                      ____________________________________________________________
consensus             GCTGTTTCACAGTTCCCATGAGTTGGTTTATCATACTCAACATTCATACTTGAAAAAAAG