Contig 001214:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF019A21-                       ACAGGTAAATCCGAGAGCGGTAGTATTGGTATGTTGCCCGTCACGCCG
                      ____________________________________________________________
consensus                         ACAGGTAAATCCGAGAGCGGTAGTATTGGTATGTTGCCCGTCACGCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF019A21-           GAATCTTCAAAACCGCGCCGGAGAATTCGCTTTCCCCACCTTTATTCGATTCCTTCCAAT
                      ____________________________________________________________
consensus             GAATCTTCAAAACCGCGCCGGAGAATTCGCTTTCCCCACCTTTATTCGATTCCTTCCAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF019A21-           CACACCGTACAATCATAATAAATGTGGTATAGATCAGCTTCTTTCATTCTCGACAAGCAG
                      ____________________________________________________________
consensus             CACACCGTACAATCATAATAAATGTGGTATAGATCAGCTTCTTTCATTCTCGACAAGCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF019A21-           CAAAACGACGACGTTGCGAAGGCCGAGAGCCGCCAAATTTCACCTCCCACTCCCACACCC
                      ____________________________________________________________
consensus             CAAAACGACGACGTTGCGAAGGCCGAGAGCCGCCAAATTTCACCTCCCACTCCCACACCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF019A21-           GCCGAGGCTTCCTCCATGGCCGGAACCCTACAAAACTCTAATTCTAATAACAACATCTCG
                      ____________________________________________________________
consensus             GCCGAGGCTTCCTCCATGGCCGGAACCCTACAAAACTCTAATTCTAATAACAACATCTCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF019A21-           GCTTATTATCAGACTAGAGCGGCACACCATGGTGTCGTCACCAGTGATTGGCTTGCTCAG
JMFF046H06-                                                      GTGATTGGCTTGCTCAG
                      ____________________________________________________________
consensus             GCTTATTATCAGACTAGAGCGGCACACCATGGTGTCGTCACCAGTGATTGGCTTGCTCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF019A21-           GCTCAAGCCGCCATAGGCAGCGGCGACCCGGAGGATGTCATCTCAGAGAACTCGTCGGCC
JMFF046H06-           GCTCAAGCCGCCATAGGCAGCGGCGACCCGGAGGATGTCATCTCAGAGAACTCGTCGGCC
                      ____________________________________________________________
consensus             GCTCAAGCCGCCATAGGCAGCGGCGACCCGGAGGATGTCATCTCAGAGAACTCGTCGGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF019A21-           AGGACCGACGATTCGGGGAAGACGTTCAGTGTGATTGATGAGTTCAATAATTGGCGTAAA
JMFF046H06-           AGGACCGACGATTCGGGGAAGACGTTCAGTGTGATTGATGAGTTCAATAATTGGCGTAAA
                      ____________________________________________________________
consensus             AGGACCGACGATTCGGGGAAGACGTTCAGTGTGATTGATGAGTTCAATAATTGGCGTAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF019A21-           CAGCCTAACTTGGCAGAGGCTGTGGCGGCGATTAGGGCTTTGGCCTCGGTTATTCGTTCT
JMFF046H06-           CAGCCTAACTTGGCAGAGGCTGTGGCGGCGATTAGGGCTTTGGCCTCGGTTATTCGTTCT
                      ____________________________________________________________
consensus             CAGCCTAACTTGGCAGAGGCTGTGGCGGCGATTAGGGCTTTGGCCTCGGTTATTCGTTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF019A21-           AGTGAAGCTACTACGATGATGGAGCTTGAAATTGAGCTGAAGAAGGCATCTGATTCTTTG
JMFF046H06-           AGTGAAGCTACTACGATGATGGAGCTTGAAATTGAGCTGAAGAAGGCATCTGATTCTTTG
                      ____________________________________________________________
consensus             AGTGAAGCTACTACGATGATGGAGCTTGAAATTGAGCTGAAGAAGGCATCTGATTCTTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF019A21-           AAATCATGGGACACAACATCCATCTCTTT                               
JMFF046H06-           AAATCATGGGACACAACATCCATCTCTTTGACGGCTGGTTGTGATCTGTTTATGCGCTAT
                      ____________________________________________________________
consensus             AAATCATGGGACACAACATCCATCTCTTTGACGGCTGGTTGTGATCTGTTTATGCGCTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF046H06-           GTTACAAGGACTTCAGCTTTGGAATATGAAGATTTCAATTCAGCAAAATCTCGCCTTCTT
rJMSF016J23+                                                TTCAACAAAATCTCGCCTTCTT
                      ____________________________________________________________
consensus             GTTACAAGGACTTCAGCTTTGGAATATGAAGATTTCAATTCAGCAAAATCTCGCCTTCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF046H06-           GAGCGTGCAGAGAAATTTGGAGAGATATCTTATAAGGCTCGAAAAATAATCGCTATGCTT
rJMSF016J23+          GAGCGTGCAGAGAAATTNGGAGAGATATCTTATAAGGCTCGAAAAATAATCGCTATGCTT
                      ____________________________________________________________
consensus             GAGCGTGCAGAGAAATTTGGAGAGATATCTTATAAGGCTCGAAAAATAATCGCTATGCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF046H06-           AGTCAAGATTTTATTTTTGATGGCTGTACCAT                            
rJMSF016J23+          AGTCAAGATTTTATTTTTGATGGCTGTACCATTTTGGTGCACGGCTTTTCTCGAGTTGTG
rJMFF019A21+                                                        TTTCTCGAGTTGTG
                      ____________________________________________________________
consensus             AGTCAAGATTTTATTTTTGATGGCTGTACCATTTTGGTGCACGGCTTTTCTCGAGTTGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF016J23+          TTGGAGATATTGAAAACAGCAGCGCAAAACAGGAAACATTTCCGAGTTCTTTGCACTGAG
rJMFF019A21+          TTGGAGATATTGAAAACAGCAGCGCAAAACAGGAAACATTTCCGAGTTCTTTGCACTGAG
                      ____________________________________________________________
consensus             TTGGAGATATTGAAAACAGCAGCGCAAAACAGGAAACATTTCCGAGTTCTTTGCACTGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF016J23+          GGGAGGCCAGACAGGACTGGGCTAAGATTATCAAATGAGCTAGCCAAGCTAGATGTTCCT
rJMFF019A21+          GGGAGGCCAGACAGGACTGGGCTAAGATTATCAAATGAGCTAGCCAAGCTAGATGTTCCT
                      ____________________________________________________________
consensus             GGGAGGCCAGACAGGACTGGGCTAAGATTATCAAATGAGCTAGCCAAGCTAGATGTTCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF016J23+          GTAAAGCTCTTAATAGACTCTGCGGTGGCATATAGCATGGATGAGGTTGATATGGTGTTT
rJMFF019A21+          GTAAAGCTCTTAATAGACTCTGCGGTGGCATATAGCATGGATGAGGTTGATATGGTGTTT
                      ____________________________________________________________
consensus             GTAAAGCTCTTAATAGACTCTGCGGTGGCATATAGCATGGATGAGGTTGATATGGTGTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF016J23+          GTAGGAGCAGATGGCGTGGTTGAAAGTGGAGGTATAATTAACATGATGGGAACCTATCAA
rJMFF019A21+          GTAGGAGCAGATGGCGTGGTTGAAAGTGGAGGTATAATTAACATGATGGGAACCTATCAA
                      ____________________________________________________________
consensus             GTAGGAGCAGATGGCGTGGTTGAAAGTGGAGGTATAATTAACATGATGGGAACCTATCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF016J23+          ATTGCTTTGGTAGCAAAGAGCATGAACAAACCAGTTTATGTTGCTGCTGAAAGCTATAAG
rJMFF019A21+          ATTGCTTTGGTAGCAAAGAGCATGAACAAACCAGTTTATGTTGCTGCTGAAAGCTATAAG
rJMFF046H06+                   GTAGCAAAGAGCATGAACAAACCAGTTTATGTTGCTGCTGAAAGCTATAAG
                      ____________________________________________________________
consensus             ATTGCTTTGGTAGCAAAGAGCATGAACAAACCAGTTTATGTTGCTGCTGAAAGCTATAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF016J23+          TTTGCTCGTCTATATCCGCTGGATCAGAAAGACATGGGTCCGGCGTTACGTCCAATTGAC
rJMFF019A21+          TTTGCTCGTCTATATCCGCTGGATCAGAAAGACATGGGTCCGGCGTTACGTCCAATTGAC
rJMFF046H06+          TTTGCTCGTCTATATCCGCTGGATCAGAAAGACATGGGTCCGGCGTTACGTCCAATTGAC
                      ____________________________________________________________
consensus             TTTGCTCGTCTATATCCGCTGGATCAGAAAGACATGGGTCCGGCGTTACGTCCAATTGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF016J23+          TTTGGCGTGCCAATTCCATCCAAGGTCGNAGNTGNAACATCTGCTCGGGATTACACACCG
rJMFF019A21+          TTTGGCGTGCCAATTCCATCCAAGGTCGAAGTTGAAACATCTGCTCGGGATTACACACCG
rJMFF046H06+          TTTGGCGTGCCAATTCCATCCAAGGTCGAAGTTGAAACATCTGCTCGGGATTACACACCG
                      ____________________________________________________________
consensus             TTTGGCGTGCCAATTCCATCCAAGGTCGAAGTTGAAACATCTGCTCGGGATTACACACCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF016J23+          CCTCAGTATCTCTCCCTTCTCTTCACGGATCTAGGTG                       
rJMFF019A21+          CCTCAGTATCTCTCCCTTCTCTTCACGGATCTAGGTGTTCTAACGCCATCTGCAGTAAGT
rJMFF046H06+          CCTCAGTATCTCTCCCTTCTCTTCACGGATCTAGGTGTTCTAACGCCATCTGCAGTAAGT
                      ____________________________________________________________
consensus             CCTCAGTATCTCTCCCTTCTCTTCACGGATCTAGGTGTTCTAACGCCATCTGCAGTAAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF019A21+          GATGAGCTCATACAGCTTTACTTATAGCGTGGTCGAGAGATAGTTTTGTTGGGTGTTAGT
rJMFF046H06+          GATGAGCTCATACAGCTTTACTTATAGCGTGGTCGAGAGATAGTTTTGTTGGGTGTTAGT
                      ____________________________________________________________
consensus             GATGAGCTCATACAGCTTTACTTATAGCGTGGTCGAGAGATAGTTTTGTTGGGTGTTAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF019A21+          GTGTCACAGATAATCATATTTGTAGTCTACAAGCAGGATTTTGCTTATCTCCCAGTTACA
rJMFF046H06+          GTGTCACAGATAATCATATTTGTAGTCTACAAGCAGGATTTTGCTTATCTCCCAGTTACA
                      ____________________________________________________________
consensus             GTGTCACAGATAATCATATTTGTAGTCTACAAGCAGGATTTTGCTTATCTCCCAGTTACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF019A21+          TTTCCTTAAAAAACACAATGCTGGATTTGTAATCCCCTCCA                   
rJMFF046H06+          TTTCCTTAAAAAACACAATGCTGGATTTGTAATCCCCTCCACATCCAGGATTGGGCTATG
                      ____________________________________________________________
consensus             TTTCCTTAAAAAACACAATGCTGGATTTGTAATCCCCTCCACATCCAGGATTGGGCTATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF046H06+          TTGTGATTCTCTTTTTGCCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             TTGTGATTCTCTTTTTGCCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG