Contig 001212:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF046B22Sequence347008874 (2)ref|XP_009787559.1|4e-07PREDICTED: probable polyol transporter 4 [Nicotiana sylvestris]377001212 (2)
JMSF023L11Sequence257008874 (2)ref|XP_006350047.1|7e-04PREDICTED: probable polyol transporter 4-like [Solanum tuberosum]736001212 (2)ref|XP_009787559.1|8e-62PREDICTED: probable polyol transporter 4 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF023L11+                                                                    TC
                      ____________________________________________________________
consensus                                                                       TC
 
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rJMSF023L11+          CTCGGGGAAGGATCGGTTGGAATCTCACTGGCAATACTGTTTGTTTGTGGCAATGTGGCG
                      ____________________________________________________________
consensus             CTCGGGGAAGGATCGGTTGGAATCTCACTGGCAATACTGTTTGTTTGTGGCAATGTGGCG
 
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rJMSF023L11+          TTTTTCTCGGTGGGGTTGGGCCCGGGTTGCTGGGTTGTGACATCGGAGATATTTCCGTTG
                      ____________________________________________________________
consensus             TTTTTCTCGGTGGGGTTGGGCCCGGGTTGCTGGGTTGTGACATCGGAGATATTTCCGTTG
 
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rJMSF023L11+          AAGTTTCGCGCCCAAGCGTCTGCACTGGGAGCCGTGGGCAACCGAATGTGCAGTGGCCTG
                      ____________________________________________________________
consensus             AAGTTTCGCGCCCAAGCGTCTGCACTGGGAGCCGTGGGCAACCGAATGTGCAGTGGCCTG
 
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rJMSF023L11+          GTCGCGATGTCCTTCCTTTCGGTCTCCCGGGCAATCACAGTGGGCGGTACCTTCTTCATT
                      ____________________________________________________________
consensus             GTCGCGATGTCCTTCCTTTCGGTCTCCCGGGCAATCACAGTGGGCGGTACCTTCTTCATT
 
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rJMSF023L11+          TTCTCGGCAATCTCGGCCCTCGCTGTCGCCTTCACCTATAAATTCATCCCCGAGACAAAA
                      ____________________________________________________________
consensus             TTCTCGGCAATCTCGGCCCTCGCTGTCGCCTTCACCTATAAATTCATCCCCGAGACAAAA
 
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rJMSF023L11+          GGCAAATCGCTCGAGCAGATTGAGTCGTTGTTCCAAAACGGACACGAGGGTGTGCCCATC
                      ____________________________________________________________
consensus             GGCAAATCGCTCGAGCAGATTGAGTCGTTGTTCCAAAACGGACACGAGGGTGTGCCCATC
 
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rJMSF023L11+          GGTGAAGTCCGTGTCGGAGATGCTGAACATCTGGTGCAGAAAGAAGTGCAGCTCAGAGAT
rJMFF046B22+                                                     AAGTGCAGCTCAGAGAT
                      ____________________________________________________________
consensus             GGTGAAGTCCGTGTCGGAGATGCTGAACATCTGGTGCAGAAAGAAGTGCAGCTCAGAGAT
 
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rJMSF023L11+          GTGCAGAAAGAGTGAGTGTCATTACTTGACTGCAAGAATTCTTTCATCTCTATTATGGAG
rJMFF046B22+          GTGCAGAAAGAGTGAGTGTCATTACTTGACGGCAAGAATTCTTTCATCTCTATTATGGAG
                      ____________________________________________________________
consensus             GTGCAGAAAGAGTGAGTGTCATTACTTGACTGCAAGAATTCTTTCATCTCTATTATGGAG
 
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rJMSF023L11+          GATAGTTTTGGTGCCATTTCACATCAACTGTGAGCATATAAATATGGTAATAGCACAGAT
rJMFF046B22+          GATAGTTTTGGTGCCATTTCACATCAGCTGTGAGCATATAAATATGGTAATAGCACAGAT
                      ____________________________________________________________
consensus             GATAGTTTTGGTGCCATTTCACATCAGCTGTGAGCATATAAATATGGTAATAGCACAGAT
 
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rJMSF023L11+          CTTTGTGGTAAGTATTGAGGGAAAACTAACATTGCATCTTGTTTCTATGGTAGCAAGCAA
rJMFF046B22+          CTTTGTGGTAAGTATTGAGGGAAAACTAACATTGCGTCTTGTTTCTATGGTAGCAAGCAA
                      ____________________________________________________________
consensus             CTTTGTGGTAAGTATTGAGGGAAAACTAACATTGCGTCTTGTTTCTATGGTAGCAAGCAA
 
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rJMSF023L11+          GAATAGATATATGTAAAACAGAATTTTACACGCACAAGGCGGAGTTTATCCCGTGCACAT
rJMFF046B22+          GAATAGATATATGTAAATCAGAATTTTACACGCTCAAGGCGGAGTTTATCCCGTGCACAT
                      ____________________________________________________________
consensus             GAATAGATATATGTAAATCAGAATTTTACACGCTCAAGGCGGAGTTTATCCCGTGCACAT
 
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rJMSF023L11+          TCTCGGATAGTAGCAGTGGGTTTCTTTCGTCGCCCAAAATAGAGAATTTT          
rJMFF046B22+          TCTCGGATAGTAGCAGTGGGTTTTTTTCGTCGCCCAAAATAGAGAATTTTTCATATGTAA
                      ____________________________________________________________
consensus             TCTCGGATAGTAGCAGTGGGTTTTTTTCGTCGCCCAAAATAGAGAATTTTTCATATGTAA
 
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rJMFF046B22+          CTTTGCCCAAGAATATGATGGAATTCAGGGAATAAAATCATTTTATTCTACTGTGGTTAC
                      ____________________________________________________________
consensus             CTTTGCCCAAGAATATGATGGAATTCAGGGAATAAAATCATTTTATTCTACTGTGGTTAC