Contig 001209:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF021C07-                                         GATGTTTTCCCGGAATTATCAGTTGTTCCA
                      ____________________________________________________________
consensus                                           GATGTTTTCCCGGAATTATCAGTTGTTCCA
 
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JMSF021C07-           TTTAGGAAGCGCCGCCTGTAACTGAAATGAGAGCCGCGACGCCGTCATCAACGTGCAGCT
                      ____________________________________________________________
consensus             TTTAGGAAGCGCCGCCTGTAACTGAAATGAGAGCCGCGACGCCGTCATCAACGTGCAGCT
 
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JMSF021C07-           GCAGCGGCGGCAAAGGAGTTGTTGGGTTTCCGGCTCACCGCCCATTCACCTACTTCCCGC
                      ____________________________________________________________
consensus             GCAGCGGCGGCAAAGGAGTTGTTGGGTTTCCGGCTCACCGCCCATTCACCTACTTCCCGC
 
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JMSF021C07-           TTCGTTCCCGTCAAATCAATTTCCCAAATCAGCAGCCAATCCCGAATTTATACGGCTTAG
                      ____________________________________________________________
consensus             TTCGTTCCCGTCAAATCAATTTCCCAAATCAGCAGCCAATCCCGAATTTATACGGCTTAG
 
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JMSF021C07-           GGTTAGCTCATTATCGCGGTTCATCATCGATATACCGTGCGGCAAGGAAGGGTGCAAATG
                      ____________________________________________________________
consensus             GGTTAGCTCATTATCGCGGTTCATCATCGATATACCGTGCGGCAAGGAAGGGTGCAAATG
 
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JMSF021C07-           CGTCGTCGTCGTCGTACTCTGGCAGCCCATTTTCACCGGACTGGGATGATAAACCCTATG
                      ____________________________________________________________
consensus             CGTCGTCGTCGTCGTACTCTGGCAGCCCATTTTCACCGGACTGGGATGATAAACCCTATG
 
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JMSF021C07-           AAGTATTGGCGAATGGGACAATATCGTACTTGGATGAGCAGGACGTAGTGACATTCCTTG
                      ____________________________________________________________
consensus             AAGTATTGGCGAATGGGACAATATCGTACTTGGATGAGCAGGACGTAGTGACATTCCTTG
 
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JMSF021C07-           ACCCTCCCAAAGAGCTCGTTCCTCTCGACCCTTCTGCCTACAATCCCGCTTCGTATCTCT
                      ____________________________________________________________
consensus             ACCCTCCCAAAGAGCTCGTTCCTCTCGACCCTTCTGCCTACAATCCCGCTTCGTATCTCT
 
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JMSF021C07-           GGAAAAAAATTGGAGATATACCAGAACAAAGGCGGCATAGGTTGCTCTCCTTGCTAAACC
rJMFF033G12+                                                              GCTAAACC
                      ____________________________________________________________
consensus             GGAAAAAAATTGGAGATATACCAGAACAAAGGCGGCATAGGTTGCTCTCCTTGCTAAACC
 
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JMSF021C07-           CAAGGCTTATATCGAGAGCTTGGCAGATAGCTGGGATGAGGTATGATGACCCCAAGTTGG
rJMSF021C07+                 TATATCGAGAGCTTGGCAGATAGCTGGGATGAGGTATGATGACCCCAAGTTGG
rJMFF033G12+          CAAGGCTTATATCGAGAGCTTGGCAGATAGCTGGGATGAGGTATGATGACCCCAAGTTGG
                      ____________________________________________________________
consensus             CAAGGCTTATATCGAGAGCTTGGCAGATAGCTGGGATGAGGTATGATGACCCCAAGTTGG
 
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JMSF021C07-           CAAAGAAAAGTGCATCTAGCCTGCTTTCTGATGGGAATGACACGACTTCACTTGAATTTT
rJMSF021C07+          CAAAGAAAAGTGCATCTAGCCTGCTTTCTGATGGGAATGACACGACTTCACTTGAATTTT
rJMFF033G12+          CAAAGAAAAGTGCATCTAGCCTGCTTTCTGATGGGAATGACACGACTTCACTTGAATTTT
                      ____________________________________________________________
consensus             CAAAGAAAAGTGCATCTAGCCTGCTTTCTGATGGGAATGACACGACTTCACTTGAATTTT
 
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JMSF021C07-           GGAAATGCCGAA                                                
rJMSF021C07+          GGAAATGCCGAACAAGTGGAGGGCCTCTACTCATTTCCTGGATAAATTACTTCAACAAGG
rJMFF033G12+          GGAAATGCCGAACAAGTGGAGGGCCTCTACTCATTTCCTGGATAAATTACTTCAACAAGG
                      ____________________________________________________________
consensus             GGAAATGCCGAACAAGTGGAGGGCCTCTACTCATTTCCTGGATAAATTACTTCAACAAGG
 
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rJMSF021C07+          CTGTCTTCCACTGTGGGGATGGGAAGACATATGGACGAATCATTGGTGGATCAATTCTGG
rJMFF033G12+          CTGTCTTCCACTGTGGGGATGGGAAGACATATGGACGAATCATTGGTGGATCAATTCTGG
rJMFF045M20+                         GGGATGGGAAGACATATGGACGAATCATTGGTGGATCAATTCTGG
                      ____________________________________________________________
consensus             CTGTCTTCCACTGTGGGGATGGGAAGACATATGGACGAATCATTGGTGGATCAATTCTGG
 
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rJMSF021C07+          CTGGAATTTC-AAATCTTATCCACTATATTTTACGGTAAAGGAATCGAATGAAGTGATGT
rJMFF033G12+          CTGGAATTTCAAAATCTTATCCACTATATTTTACGGTAAAGGAATCGAATGAAGTGATGT
rJMFF045M20+          CTGGAATTTCAAAATCTTATCCACTATATTTTACGGTAAAGGAATCGAATGAAGTGATGT
                      ____________________________________________________________
consensus             CTGGAATTTCAAAATCTTATCCACTATATTTTACGGTAAAGGAATCGAATGAAGTGATGT
 
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rJMSF021C07+          CAACAGAGCATCCTTGTGATTTGGCATACGAATTTGGAAATGGACTGTTTGATCTGCCTG
rJMFF033G12+          CAACAGAGCATCCTTGTGATTTGGCATACGAATTTGGAAATGGACTGTTTGATCTGCCTG
rJMFF045M20+          CAACAGAGCATCCTTGTGATTTGGCATACGAATTTGGAAATGGACTGTTTGATCTGCCTG
                      ____________________________________________________________
consensus             CAACAGAGCATCCTTGTGATTTGGCATACGAATTTGGAAATGGACTGTTTGATCTGCCTG
 
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rJMFF027O02+             TACCAGAAGGCTTCCNTAAGCCAGCAAAACATCCATGGCCATTCAACGATCAGGTTG
rJMSF021C07+          ATTTACCAGAAGGCTTCCCTAAGCCAGCAAAACATCCATGGCCATTCAACGATCAGGTTG
rJMFF033G12+          ATTTACCAGAAGGCTTCCCTAAGCCAGCAAAACATCCATGGCCATTCAACGATCAGGTTG
rJMFF045M20+          ATTTACCAGAAGGCTTCCCTAAGCCAGCAAAACATCCATGGCCATTCAACGATCAGGTTG
                      ____________________________________________________________
consensus             ATTTACCAGAAGGCTTCCCTAAGCCAGCAAAACATCCATGGCCATTCAACGATCAGGTTG
 
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rJMFF027O02+          TTATATATGTTCGTCACGTGGGCCCAGGAGTAATCGTGGGGCAAGCATGGCAAGAGGGTG
rJMSF021C07+          TTATATATGTTCGTCACGTGGGCCCAGGAGTAATCGTGGGGCAAGCATGGCAAGAGGGTG
rJMFF033G12+          TTATATATGTTCGTCACGTGGGCCCAGGAGTAATCGTGGGGCAAGCATGGCAAGAGGGTG
rJMFF045M20+          TNATATATGTTCGTCACGTGGGCCCAGGAGTAATCGTGGGGCAAGCATGGCAAGAGGGTG
                      ____________________________________________________________
consensus             TTATATATGTTCGTCACGTGGGCCCAGGAGTAATCGTGGGGCAAGCATGGCAAGAGGGTG
 
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rJMFF027O02+          AAGCATTGGAACAAGTACGTAAGAAGCTATGTGGTGAGATCTTGATGGTGAAGGATTATG
rJMSF021C07+          AAGCATTGGAACAAGTACCTAAGAAGCTATGTGGTGAGATCTTGATGGTGAAGGATTATG
rJMFF033G12+          AAGCATTGGAACAAGTACCTAAGAAGCTATGTGGTGAGATCTTGATGGTGAAGGATTATG
rJMFF045M20+          AAGCATTGGAACAAGTACCTAAGAAGCTATGTGGTGAGATCTTGATGGTGAAGGATTATG
                      ____________________________________________________________
consensus             AAGCATTGGAACAAGTACCTAAGAAGCTATGTGGTGAGATCTTGATGGTGAAGGATTATG
 
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rJMFF027O02+          TTNGAATCAAGTGCTGNTGATTGCCACAAGGAACCACCAAGATTGCCTTGACATCAAACA
rJMSF021C07+          TTTGAATCAAGTGCTGTTGATTGCCACAAGGAACCACCAAGATTGCCTTGACATCAAACA
rJMFF033G12+          TTTGAATCAAGTGCTGTTGATTGCCACAAGGAACCACCAAGATTGCCTTGACATCAAACA
rJMFF045M20+          TTTGAATCAAGTGCTGTTGATTGCCACAAGGAACCACCAAGATTGCCTTGACATCAAACA
                      ____________________________________________________________
consensus             TTTGAATCAAGTGCTGTTGATTGCCACAAGGAACCACCAAGATTGCCTTGACATCAAACA
 
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rJMFF027O02+          GAGCTATCACCTCTCCATTGCATGCTTTCACTCCCAATGTAATACACTGAAATGATGAAT
rJMSF021C07+          GAGCTATCACCTCTCCATTGCATGCTTTCACTCCCAATGTAATACACTGAAATGATGAAT
rJMFF033G12+          GAGCTATCACCTCTCCATTGCATGCTTTCACTCCCAATGTAATACACTGAAATGATGAAT
rJMFF045M20+          GAGCTATCACCTCTCCATTGCATGCTTTCACTCCCAATGTAATACACTGAAATGATGAAT
                      ____________________________________________________________
consensus             GAGCTATCACCTCTCCATTGCATGCTTTCACTCCCAATGTAATACACTGAAATGATGAAT
 
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rJMFF027O02+          CATATTGGCAACTTAACTGAGAGTATTGCAGTCTCACTCACAGTTGCATATATGATACTG
rJMSF021C07+          CATATTGGCAACTTAACTGAGAGTATTGCAGTCTCACTCACAGTTGCATATATGATACTG
rJMFF033G12+          CATATTGGCAACTTAACTGAGAGTATTGCAGTCTCACTCACAGTTGCATATATGATACTG
rJMFF045M20+          CATATTGGCAACTTAACTGAGAGTATTGCAGTCTCACTCACAGTTGCATATATGATACTG
                      ____________________________________________________________
consensus             CATATTGGCAACTTAACTGAGAGTATTGCAGTCTCACTCACAGTTGCATATATGATACTG
 
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rJMFF027O02+          TGTAGGTGGCAAAGAAAGCTCCCCTTTTATGTATACTGTC                    
rJMSF021C07+          TGTAGGTGGCAAAGAAAGCTCCCCTTTTATGTATACTGTC                    
rJMFF033G12+          TGTAGGTGGCAAAGAAAGCTCCCCTTTTATGTATACTGTC                    
rJMFF045M20+          TGTAGGTGGCAAAGAAAGCTCCCCTTTTATGTATACTGTCTTTTGTATTCTTGTTTGTTA
                      ____________________________________________________________
consensus             TGTAGGTGGCAAAGAAAGCTCCCCTTTTATGTATACTGTCTTTTGTATTCTTGTTTGTTA
 
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rJMFF045M20+          ATGAAATTCCCTTTTATGTAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             ATGAAATTCCCTTTTATGTAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG