| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF025E21 | Sequence | 558 | 005251 (6) | emb|CDP02510.1| | 1e-82 | unnamed protein product [Coffea canephora] | 740 | 001207 (6) | emb|CDP02510.1| | 3e-74 | unnamed protein product [Coffea canephora] |
| JMFF025P15 | Sequence | 527 | 005251 (6) | emb|CDP02510.1| | 1e-73 | unnamed protein product [Coffea canephora] | 786 | 001207 (6) | emb|CDP02510.1| | 6e-85 | unnamed protein product [Coffea canephora] |
| JMFF035B16 | Sequence | 572 | 005251 (6) | emb|CDP02510.1| | 8e-85 | unnamed protein product [Coffea canephora] | 789 | 001207 (6) | emb|CDP02510.1| | 1e-86 | unnamed protein product [Coffea canephora] |
| JMFF045K01 | Sequence | 557 | 005251 (6) | emb|CDP02510.1| | 6e-82 | unnamed protein product [Coffea canephora] | 648 | 001207 (6) | emb|CDP02510.1| | 4e-43 | unnamed protein product [Coffea canephora] |
| JMSF033F20 | Sequence | 725 | 005251 (6) | emb|CDP02510.1| | 1e-122 | unnamed protein product [Coffea canephora] | 750 | 001207 (6) | emb|CDP02510.1| | 9e-77 | unnamed protein product [Coffea canephora] |
| JMSF041K24 | Sequence | 796 | 005251 (6) | emb|CDP02510.1| | 1e-83 | unnamed protein product [Coffea canephora] | 623 | 001207 (6) | emb|CDP02510.1| | 1e-33 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
rJMFF035B16+ GAAG
____________________________________________________________
consensus GAAG
. : . : . : . : . : . :
rJMSF033F20+ GAAAATGAGCCTGGAGATCCTGGGGTGGTGC
rJMFF035B16+ GAATCGCTTACCAGTGGAGATACATGGTGGAAAATGAGCCTGGAGATCCTGGGGTGGTGC
rJMFF025P15+ AATCGCTTACCAGTGGAGATACATGGTGGAAAATGAGCCTGGAGATCCTGGGGTGGTGC
rJMFF025E21+ CCTGGGGTGGTGC
____________________________________________________________
consensus GAATCGCTTACCAGTGGAGATACATGGTGGAAAATGAGCCTGGAGATCCTGGGGTGGTGC
. : . : . : . : . : . :
rJMSF033F20+ CTGGCTCGTGCTCCAATAGAAAGGAATCAAAGCCTCTTAATTCGAGAAGTGCCTCGCTCT
rJMFF035B16+ CTGGCTCGTGCTCCAATAGAAAGGAATCAAAGCCTCTTAATTCGAGAAGTGCCTCGCTCT
rJMFF025P15+ CTGGCTCGTGCTCCAATAGAAAGGAATCAAAGCCTCTTAATTCGAGAAGTGCCTCGCTCT
rJMFF025E21+ CTGGCTCGTGCTCCAATAGAAAGGAATCAAAGCCTCTTAATTCGAGAAGTGCCTCGCTCT
____________________________________________________________
consensus CTGGCTCGTGCTCCAATAGAAAGGAATCAAAGCCTCTTAATTCGAGAAGTGCCTCGCTCT
. : . : . : . : . : . :
rJMSF033F20+ TTCTAATGAATTACTTCCCTACAATTCCTGCTCAAAATGAAGTTTGCAAAGAACATTCTA
rJMSF041K24+ TTGCAAAGAACATTCTA
rJMFF035B16+ TTCTAATGAATTACTTCCCTACAATTCCTGCTCAAAATGAAGTTTGCAAAGAACATTCTA
rJMFF025P15+ TTCTAATGAATTACTTCCCTACAATTCCTGCTCAAAATGAAGTTTGCAAAGAACATTCTA
rJMFF025E21+ TTCTAATGAATTACTTCCCTACAATTCCTGCTCAAAATGAAGTTTGCAAAGAACATTCTA
____________________________________________________________
consensus TTCTAATGAATTACTTCCCTACAATTCCTGCTCAAAATGAAGTTTGCAAAGAACATTCTA
. : . : . : . : . : . :
rJMSF033F20+ CTCCACTAGCTGATATGGTTGGCACTTGTTATAAAGCAGCCGGGAATTTGATGCCAAATT
rJMSF041K24+ CTCCACTAGCTGATATGGTTGGCACTTGTTATAAAGCAGCCGGGAATTTGATGCCAAATT
rJMFF035B16+ CTCCACTAGCTGATATGGTTGGCACTTGTTATAAAGCAGCCGGGAATTTGATGCCAAATT
rJMFF025P15+ CTCCACTAGCTGATATGGTTGGCACTTGTTATAAAGCAGCCGGGAATTTGATGCCAAATT
rJMFF025E21+ CTCCACTAGCTGATATGGTTGGCACTTGTTATAAAGCAGCCGGGAATTTGATGCCAAATT
rJMFF045K01+ GATATGGTTGGCACTTGTTATAAAGCAGCCGGGAATNTGATGCCAAATT
____________________________________________________________
consensus CTCCACTAGCTGATATGGTTGGCACTTGTTATAAAGCAGCCGGGAATTTGATGCCAAATT
. : . : . : . : . : . :
rJMSF033F20+ TTGTGGCAGTAAACCTTTACATGAGGAGCGATGGAGGGGGTG-TTTTTGATGATTTGGAT
rJMSF041K24+ TTGTGGCAGTAAACTTTTACATGAGGAGCGATGGAGGGGGTGTTTTTTGATGATTTGGAT
rJMFF035B16+ TTGTGGCAGTAAACTTTTACATGAGGAGCGATGGAGGGGGTG-TTTTTGATGATTTGGAT
rJMFF025P15+ TTGTGGCAGTAAACTTTTACATGAGGAGCGATGGAGGGGGTG-TTTTTGATGATTTGGAT
rJMFF025E21+ TTGTGGCAGTAAACTTTTACATGAGGAGCGATGGAGGGGGTG-TTTTTGATGATTTGGAT
rJMFF045K01+ TTGTGGCAGTAAACTTTTACATGAGGAGCGATGGAGGGGGTG-TTTTTGATGATTTGGAT
____________________________________________________________
consensus TTGTGGCAGTAAACTTTTACATGAGGAGCGATGGAGGGGGTG-TTTTTGATGATTTGGAT
. : . : . : . : . : . :
rJMSF033F20+ CGAATGGATGGTCAGTCTTTGTGCGGCTGCACTACAATAACTGCTTGCCAGGCAGGAGAA
rJMSF041K24+ CGAATGAATGGTCAGTCTTTGTGCGGCTGCACTACAATAACTGCTTGCCAGGCAGGAGAA
rJMFF035B16+ CGAATGAATGGTCAGTCTTTGTGCGGCTGCACTACAATAACTGCTTGCCAGGCAGGAGAA
rJMFF025P15+ CGAATGAATGGTCAGTCTTTGTGCGGCTGCACTACAATAACTGCTTGCCAGGCAGGAGAA
rJMFF025E21+ CGAATGAATGGTCAGTCTTTGTGCGGCTGCACTACAATAACTGCTTGCCAGGCAGGAGAA
rJMFF045K01+ CGAATGAATGGTCAGTCTTTGTGCGGCTGCACTACAATAACTGCTTGCCAGGCAGGAGAA
____________________________________________________________
consensus CGAATGAATGGTCAGTCTTTGTGCGGCTGCACTACAATAACTGCTTGCCAGGCAGGAGAA
. : . : . : . : . : . :
rJMSF033F20+ CATTTTGGAGTTTGCAAGAATGTTGCTGCATCTAATACAACTCCAGGGACAACTGACCCT
rJMSF041K24+ CATTTTGGAGTTTGCAAGAATGTTGCTGCATCTAATACAACTCCAGGGACAACTGACCCT
rJMFF035B16+ CATTTTGGAGTTTGCAAGAATGTTGCTGCATCTAATACAACTCCAGGGACAACTGACCCT
rJMFF025P15+ CATTTTGGAGTTTGCAAGAATGTTGCTGCATCTAATACAACTCCAGGGACAACTGACCCT
rJMFF025E21+ CATTTTGGAGTTTGCAAGAATGTTGCTGCATCTAATACAACTCCAGGGACAACTGACCCT
rJMFF045K01+ CATTTTGGAGTTTGCAAGAATGTTGCTGCATCTAATACAACTCCAGGGACAACTGACCCT
____________________________________________________________
consensus CATTTTGGAGTTTGCAAGAATGTTGCTGCATCTAATACAACTCCAGGGACAACTGACCCT
. : . : . : . : . : . :
rJMSF033F20+ GCAGGAAGCTTTTCTGGGTCTGTGCAATTGACAGGGTCTGCTTCAGCCATCAAAGTCGAA
rJMSF041K24+ GCAGGAAGCTTTTCTGGGTCTGTGCAATTGACAGGGTCTGCTTCAGCCATCAAAGTCGAA
rJMFF035B16+ GCAGGAAGCTTTTCTGGGTCTGTGCAATTGACAGGGTCTGCTTCAGCCATCAAAGTCGAA
rJMFF025P15+ GCAGGAAGCTTTTCTGGGTCTGTGCAATTGACAGGGTCTGCTTCAGCCATCAAAGTCGAA
rJMFF025E21+ GCAGGAAGCTTTTCTGGGTCTGTGCAATTGACAGGGTCTGCTTCAGCCATCAAAGTCGAA
rJMFF045K01+ GCAGGAAGCTTTTCTGGGTCTGTGCAATTGACAGGGTCTGCTTCAGCCATCAAAGTCGAA
____________________________________________________________
consensus GCAGGAAGCTTTTCTGGGTCTGTGCAATTGACAGGGTCTGCTTCAGCCATCAAAGTCGAA
. : . : . : . : . : . :
rJMSF033F20+ AGTATATTTTACGCGTTCTTTCTCTTCTGGCCTGTGGTGTTGTTGTTTCTCGTATGATTA
rJMSF041K24+ AGTATATTTTACGCGTTCTTTCTCTTCTGGCCTGTGGTGTTGTTGTTTCTCGTATGATTA
rJMFF035B16+ AGTATATTTTACGCGTTCTTTCTCTTCTGGCCTGTGGTGTTGTTGTTTCTCGTATGATTA
rJMFF025P15+ AGTATATTTTACGCGTTCTTTCTCTTCTGGCCTGTGGTGTTGTTGTTTCTCGTATGATTA
rJMFF025E21+ AGTATATTTTACGCGTTCTTTCTCTTCTGGCCTGTGGTGTTGTTGTTTCTCGTATGATTA
rJMFF045K01+ AGTATATTTTACGCGTTCTTTCTCTTCTGGCCTGTGGTGTTGTTGTTTCTCGTATGATTA
____________________________________________________________
consensus AGTATATTTTACGCGTTCTTTCTCTTCTGGCCTGTGGTGTTGTTGTTTCTCGTATGATTA
. : . : . : . : . : . :
rJMSF033F20+ GCGGGAAGTGATCGAGTTCTATGGTAGAATGTGTTGCTGCATTGTTGAGTGCTGGTTAGG
rJMSF041K24+ GCGGGAAGTGATCGAGTTCTATGGTAGAATGTGTTGCTGCATTGTTGAGTGCTGGTTAGG
rJMFF035B16+ GCGGGAAGTGATCGAGTTCTATGGTAGAATGTGTTGCTGCATTGTTGAGTGCTGGTTAGG
rJMFF025P15+ GCGGGAAGTGATCGAGTTCTATGGTAGAATGTGTTGCTGCATTGTTGAGTGCTGGTTAGG
rJMFF025E21+ GCGGGAAGTGATCGAGTTCTATGGTAGAATGTGTTGCTGCATTGTTGAGTGCTGGTTAGG
rJMFF045K01+ GCGGGAAGTGATCGAGTTCTATGGTAGAATGTGTTGCTGCATTGTTGAGTGCTGGTTAGG
____________________________________________________________
consensus GCGGGAAGTGATCGAGTTCTATGGTAGAATGTGTTGCTGCATTGTTGAGTGCTGGTTAGG
. : . : . : . : . : . :
rJMSF033F20+ CCTTCACTGTGTAAAGTTTTGAGTCAGAAAGGTACTCATTTTGGCCTGTTAAAACTAGAA
rJMSF041K24+ CCTTCACTGTGTAAAGTTTTGAGTCAGAAAGGTACTCATTTTGGCCTGTTAAAACTAGAA
rJMFF035B16+ CCTTCACTGTGTAAAGTTTTGAGTCAGAAAGGTACTCATTTTGGCCTGTTAAAACTAGAA
rJMFF025P15+ CCTTCACTGTGTAAAGTTTTGAGTCAGAAAGGTACTCATTTTGGCCTGTTAAAACTAGAA
rJMFF025E21+ CCTTCACTGTGTAAAGTTTTGAGTCAGAAAGGTACTCATTTTGGCCTGTTAAAACTAGAA
rJMFF045K01+ CCTTCACTGTGTAAAGTTTTGAGTCAGAAAGGTACTCATTTTGGCCTGTTAAAACTAGAA
____________________________________________________________
consensus CCTTCACTGTGTAAAGTTTTGAGTCAGAAAGGTACTCATTTTGGCCTGTTAAAACTAGAA
. : . : . : . : . : . :
rJMSF033F20+ AACATTCACCTTAGAATGTTAAGGCAAAAGTCTAGGTAATCAGTGTTATAGTTTAGCAGA
rJMSF041K24+ AACATTCACCTTAGAATGTTAAGGCAAAAGTCTAGGTAATCAGTGTTATAGTTTAGCAGA
rJMFF035B16+ AACATTCACCTTAGAATGTTAAGGCAAAAGTCTAGGTAATCAGTGTTATAGTTTAGCAGA
rJMFF025P15+ AACATTCACCTTAGAATGTTAAGGCAAAAGTCTAGGTAATCAGTGTTATAGTTTAGCAGA
rJMFF025E21+ AACATTCACCTTAGAATGTTAAGGCAAAAGTCTAGGTAATCAGTGTTATAGTTTAGCAGA
rJMFF045K01+ AACATTCACCTTAGAATGTTAAGGCAAAAGTCTAGGTAATCAGTGTTATAGTTTAGCAGA
____________________________________________________________
consensus AACATTCACCTTAGAATGTTAAGGCAAAAGTCTAGGTAATCAGTGTTATAGTTTAGCAGA
. : . : . : . : . : . :
rJMSF033F20+ GATGGCTACAGCCTGCAACAAGTAAACTGTACTCAACAT
rJMSF041K24+ GATGGCTACAGCCTGCAACAAGTAAACTGTACTCAACAT
rJMFF035B16+ GATGGCTACAGCCTGCAACAAGTAAACTGTACTCAACATTATCCAGA
rJMFF025P15+ GATGGCTACAGCCTGCAACAAGTAAACTGTACTCAACATTATCCAGA-TTTGTGTTTA
rJMFF025E21+ GATGGCTACAGCCTGCAACAAGTAAACTGTACTCAACATTATCCAGA-TTTGTGTTTA
rJMFF045K01+ GATGGCTACAGCCTGCAACAAGTAAACTGTACTCAACATTATCCAGAGTTTGTGTTTATA
____________________________________________________________
consensus GATGGCTACAGCCTGCAACAAGTAAACTGTACTCAACATTATCCAGA-TTTGTGTTTATA
. : . : . : . : . : . :
rJMFF045K01+ AAACCCCCCATGATTTTTCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
____________________________________________________________
consensus AAACCCCCCATGATTTTTCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG