Contig 001204:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF035H13Sequence588001729 (2)ref|XP_010312600.1|1e-15PREDICTED: uncharacterized protein LOC101267185 isoform X2 [Solanum lycopersicu705001204 (2)ref|XP_004250047.1|7e-17PREDICTED: uncharacterized protein LOC101267185 isoform X1 [Solanum lycopersicu
JMFF045E15Sequence640001729 (2)ref|XP_009589573.1|1e-25PREDICTED: uncharacterized protein LOC104086925 isoform X1 [Nicotiana tomentosi577001204 (2)ref|XP_009589575.1|8e-10PREDICTED: uncharacterized protein LOC104086925 isoform X2 [Nicotiana tomentosi

Alignment

This contig is upended


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rJMFF035H13+                                                                  TAAG
                      ____________________________________________________________
consensus                                                                     TAAG
 
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rJMFF035H13+          CAAAGAGCTAGCAACTTCAGGTGGACTCAAATTGAAACCCGAGAACATATTCAAGTGAAG
                      ____________________________________________________________
consensus             CAAAGAGCTAGCAACTTCAGGTGGACTCAAATTGAAACCCGAGAACATATTCAAGTGAAG
 
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rJMFF035H13+          CGTGAGCCCTCGTTGTCTTCCCAAAACCAGGCTTCATCAGCTGCAGATGCAAGTTCTTCA
                      ____________________________________________________________
consensus             CGTGAGCCCTCGTTGTCTTCCCAAAACCAGGCTTCATCAGCTGCAGATGCAAGTTCTTCA
 
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rJMFF035H13+          TCAACTATTGCCAAGACAGGCGTCGATGAGTTCCCCTTGCCGAGTCAAACAGCAGATGAA
rJMFF045E15+                                 CGATGAGTTCCCCTTGCCGAGTCAAACAGCAGATGAA
                      ____________________________________________________________
consensus             TCAACTATTGCCAAGACAGGCGTCGATGAGTTCCCCTTGCCGAGTCAAACAGCAGATGAA
 
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rJMFF035H13+          GCGCTACACGAGTCACAGGTGAATCGGAGCTTGTCCCATGGTCAGTTGCTGTCTTTGTCA
rJMFF045E15+          GCGCTACACGAGTCACAGGTGAATCGGAGCTTGTCCCATGGTCAGTTGCTGTCTTTGTCA
                      ____________________________________________________________
consensus             GCGCTACACGAGTCACAGGTGAATCGGAGCTTGTCCCATGGTCAGTTGCTGTCTTTGTCA
 
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rJMFF035H13+          AATAACTACGAGGAATTTAGGGCTAACAAGGAAGCAAAACTGGAAGAGTGGTTGGAAGGA
rJMFF045E15+          AATAACTACGAGGAATTTAGGGCTAACAAGGAAGCAAAACTGGAAGAGTGGTTGGAAGGA
                      ____________________________________________________________
consensus             AATAACTACGAGGAATTTAGGGCTAACAAGGAAGCAAAACTGGAAGAGTGGTTGGAAGGA
 
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rJMFF035H13+          ACAGGTGATCAGCAAGATAGGACTGAATAACATGAAAATGCAAATAAACGGTCAGCGAAT
rJMFF045E15+          ACAGGTGATCAGCAAGATAGGACTGAATAACATGAAAATGCAAATAAACGGTCAGCGAAT
                      ____________________________________________________________
consensus             ACAGGTGATCAGCAAGATAGGACTGAATAACATGAAAATGCAAATAAACGGTCAGCGAAT
 
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rJMFF035H13+          CAGGTCGCCCATGCTTTGGCTAAGGAAGCTATTTCTTTACCTGGCTATGTGGAATGGTTC
rJMFF045E15+          CAGGTCGCCCATGCTTTGGCTAAGGAAGCTATTTCTTTACCTGGCTATGTGGAATGGTTC
                      ____________________________________________________________
consensus             CAGGTCGCCCATGCTTTGGCTAAGGAAGCTATTTCTTTACCTGGCTATGTGGAATGGTTC
 
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rJMFF035H13+          TATACTCCCCCTAACTTCATTGTGGATGTTTTGAATTTTGATGGTTCTAATTAATATAGT
rJMFF045E15+          TATACTCCCCCTAACTTCATTGTGGATGTTTTGAATTTTGATGGTTCTAATTAATATAGT
                      ____________________________________________________________
consensus             TATACTCCCCCTAACTTCATTGTGGATGTTTTGAATTTTGATGGTTCTAATTAATATAGT
 
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rJMFF035H13+          TCTGTTACTTTCAAAAAAAACATGAGAAGCAGATGGGCTTCATTATTCTGGGCAACATAT
rJMFF045E15+          TCTGTTACTTTCAAAAAAAACATGAGAAGCAGATGGGCTTCATTATTCTGGGCAACATAT
                      ____________________________________________________________
consensus             TCTGTTACTTTCAAAAAAAACATGAGAAGCAGATGGGCTTCATTATTCTGGGCAACATAT
 
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rJMFF035H13+          AATGCTTCATTGTGAAGGGCTCTATATGTATCATTGCTGGTTGACCCTTTGGAGCATAAT
rJMFF045E15+          AATGCTTCATTGTGAAGGGCTCTATATGTATCATTGCTGGTTGACCCTTTGGAGCATAAT
                      ____________________________________________________________
consensus             AATGCTTCATTGTGAAGGGCTCTATATGTATCATTGCTGGTTGACCCTTTGGAGCATAAT
 
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rJMFF035H13+          AAATGCCAAAGTTAAAAAGAAAAGTCACAAGGGATGAAAAAGATTGTTGAATTTAGGGGA
rJMFF045E15+          AAATGCCAAAGTTAAAAAGAAAAGTCACAAGGGATGAAAAAGATTGTTGAATTTAGGGGA
                      ____________________________________________________________
consensus             AAATGCCAAAGTTAAAAAGAAAAGTCACAAGGGATGAAAAAGATTGTTGAATTTAGGGGA
 
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rJMFF035H13+          CAAGATTGCATGTAATCCAAAATTAATTGATTTTACATAT                    
rJMFF045E15+          CAAGATTGCATGTAATCCAAAATTAATTGATTTTACATATTGTATTATGATTGTTCATCC
                      ____________________________________________________________
consensus             CAAGATTGCATGTAATCCAAAATTAATTGATTTTACATATTGTATTATGATTGTTCATCC