| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF022C16 | Sequence | 397 | 001199 (6) | ref|XP_009590747.1| | 98.2 | PREDICTED: uncharacterized protein LOC104087886 [Nicotiana tomentosiformis] | 359 | 001199 (6) | ref|XP_009590747.1| | 98.2 | PREDICTED: uncharacterized protein LOC104087886 [Nicotiana tomentosiformis] |
| JMFF028I03 | Sequence | 432 | 001199 (6) | ref|XP_009590747.1| | 98.2 | PREDICTED: uncharacterized protein LOC104087886 [Nicotiana tomentosiformis] | 384 | 001199 (6) | ref|XP_009590747.1| | 98.2 | PREDICTED: uncharacterized protein LOC104087886 [Nicotiana tomentosiformis] |
| JMFF044J07 | Sequence | 387 | 001199 (6) | ref|XP_009590747.1| | 98.2 | PREDICTED: uncharacterized protein LOC104087886 [Nicotiana tomentosiformis] | 414 | 001199 (6) | ref|XP_009590747.1| | 98.2 | PREDICTED: uncharacterized protein LOC104087886 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMFF028I03+ CTTTAAAGTATTATTCCGTGCATCTCTTC
JMFF028I03- CTTTAAAGTATTATTCCGTGCATCTCTTC
____________________________________________________________
consensus CTTTAAAGTATTATTCCGTGCATCTCTTC
. : . : . : . : . : . :
rJMFF028I03+ CCTGTTATCCTTCCATCAGTTTCTTCTATTGAGAGAAGATGCCCGCGCCTCCACCGGCAA
JMFF028I03- CCTGTTATCCTTCCATCAGTTTCTTCTATTGAGAGAAGATGCCCGCGCCTCCACCGGCAA
JMFF022C16- ATCCTTCCATCAGTTTCTTCTATTGAGAGAAGATGCCCGCGCCTCCACCGGCAA
JMFF044J07- ATCCTTCCATCAGTTTCTTCTATTGAGAGAAGATGCCCGCGCCTCCACCGGCAA
rJMFF022C16+ ATCCTTCCATCAGTTTCTTCTATTGAGAGAAGATGCCCGCGCCTCCACCGGCAA
rJMFF044J07+ ATCCTTCCATCAGTTTCTTCTATTGAGAGAAGATGCCCGCGCCTCCACCGGCAA
____________________________________________________________
consensus CCTGTTATCCTTCCATCAGTTTCTTCTATTGAGAGAAGATGCCCGCGCCTCCACCGGCAA
. : . : . : . : . : . :
rJMFF028I03+ CTGGAAGCTCCAGCTCTCCGGCGTTGTACTCTCACCACGATCTTCTCAAACTGGTGAGGA
JMFF028I03- CTGGAAGCTCCAGCTCTCCGGCGTTGTACTCTCACCACGATCTTCTCAAACTGGTGAGGA
JMFF022C16- CTGGAAGCTCCAGCTCTCCGGCGTTGTACTCTCACCACGATCTTCTCAAACTGGTGAGGA
JMFF044J07- CTGGAAGCTCCAGCTCTCCGGCGTTGTACTCTCACCACGATCTTCTCAAACTGGTGAGGA
rJMFF022C16+ CTGGAAGCTCCAGCTCTCCGGCGTTGTACTCTCACCACGATCTTCTCAAACTGGTGAGGA
rJMFF044J07+ CTGGAAGCTCCAGCTCTCCGGCGTTGTACTCTCACCACGATCTTCTCAAACTGGTGAGGA
____________________________________________________________
consensus CTGGAAGCTCCAGCTCTCCGGCGTTGTACTCTCACCACGATCTTCTCAAACTGGTGAGGA
. : . : . : . : . : . :
rJMFF028I03+ GTCACGAGGTTGCATTAGCGGAGCTCAATAATATCCCTGCTTCTCGAACTGTCTTCCAGA
JMFF028I03- GTCACGAGGTTGCATTAGCGGAGCTCAATAATATCCCTGCTTCTCGAACTGTCTTCCAGA
JMFF022C16- GTCACGAGGTTGCATTAGCGGAGCTCAATAATATCCCTGCTTCTCGAACTGTCTTCCAGA
JMFF044J07- GTCACGAGGTTGCATTAGCGGAGCTCAATAATATCCCTGCTTCTCGAACTGTCTTCCAGA
rJMFF022C16+ GTCACGAGGTTGCATTAGCGGAGCTCAATAATATCCCTGCTTCTCGAACTGTCTTCCAGA
rJMFF044J07+ GTCACGAGGTTGCATTAGCGGAGCTCAATAATATCCCTGCTTCTCGAACTGTCTTCCAGA
____________________________________________________________
consensus GTCACGAGGTTGCATTAGCGGAGCTCAATAATATCCCTGCTTCTCGAACTGTCTTCCAGA
. : . : . : . : . : . :
rJMFF028I03+ GAAATGGGAACCTATTTTTCCGTACAACTGCTCAGAAGGCAATGTCTTATGAGCAAAAGC
JMFF028I03- GAAATGGGAACCTATTTTTCCGTACAACTGCTCAGAAGGCAATGTCTTATGAGCAAAAGC
JMFF022C16- GAAATGGGAACCTATTTTTCCGTACAACTGCTCAGAAGGCAATGTCTTATGAGCAAAAGC
JMFF044J07- GAAATGGGAACCTATTTTTCCGTACAACTGCTCAGAAGGCAATGTCTTATGAGCAAAAGC
rJMFF022C16+ GAAATGGGAACCTATTTTTCCGTACAACTGCTCAGAAGGCAATGTCTTATGAGCAAAAGC
rJMFF044J07+ GAAATGGGAACCTATTTTTCCGTACAACTGCTCAGAAGGCAATGTCTTATGAGCAAAAGC
____________________________________________________________
consensus GAAATGGGAACCTATTTTTCCGTACAACTGCTCAGAAGGCAATGTCTTATGAGCAAAAGC
. : . : . : . : . : . :
rJMFF028I03+ AATTGGAGATGGCCAAAGCTAAGCTGCAAAAGCTAACTTCTTGATGTTATCAAGTGTTTT
JMFF028I03- AATTGGAGATGGCCAAAGCTAAGCTGCAAAAGCTAACTTCTTGATGTTATCAAGTGTTTT
JMFF022C16- AATTGGAGATGGCCAAAGCTAAGCTGCAAAAGCTAACTTCTTGATGTTATCAAGTGTTTT
JMFF044J07- AATTGGAGATGGCCAAAGCTAAGCTGCAAAAGCTAACTTCTTGATGTTATCAAGTGTTTT
rJMFF022C16+ AATTGGAGATGGCCAAAGCTAAGCTGCAAAAGCTAACTTCTTGATGTTATCAAGTGTTTT
rJMFF044J07+ AATTGGAGATGGCCAAAGCTAAGCTGCAAAAGCTAACTTCTTGATGTTATCAAGTGTTTT
____________________________________________________________
consensus AATTGGAGATGGCCAAAGCTAAGCTGCAAAAGCTAACTTCTTGATGTTATCAAGTGTTTT
. : . : . : . : . : . :
rJMFF028I03+ TTCATGGTTTGGTTGTAGCCAAGTGCAGTATTTGTTATATTTGTGAAAAGTTCCC
JMFF028I03- TTCATGGTTTGGTTGTAGCCAAGTGCAGTATTTGTTATATTTGTGAAAAGTTCCCTGATG
JMFF022C16- TTCATGGTTTGGTTGTAGCCAAGTGCAGTATTTGTTATATTTGTGAAAAGTTCCCTGATG
JMFF044J07- TTCATGGTTTGGTTGTAGCCAAGTGCAGTATTTGTTATATTTGTGAAAAGTTCCCTGATG
rJMFF022C16+ TTCATGGTTTGGTTGTAGCCAAGTGCAGTATTTGTTATATTTGTGAAAAGTTCCCTGATG
rJMFF044J07+ TTCATGGTTTGGTTGTAGCCAAGTGCAGTATTTGTTATATTTGTGAAAAGTTCCCTGATG
____________________________________________________________
consensus TTCATGGTTTGGTTGTAGCCAAGTGCAGTATTTGTTATATTTGTGAAAAGTTCCCTGATG
. : . : . : . : . : . :
JMFF028I03- AACGTGTTTGAAATGTTTCAAATTGAATTTCACAAAAAAAAAA
JMFF022C16- AACATGTTTGAAATGTTTCAAATTGAATTTCACAAAAAAAAAA
JMFF044J07- AACATGTTTGAAATGTTTCAAATTGAATTTCAC
rJMFF022C16+ AACAT
rJMFF044J07+ AACATGTTTGAAATGTTTCAAATTGAATTTCACAAAAAAAAAAAAAAAACTCTCCAGGGT
____________________________________________________________
consensus AACATGTTTGAAATGTTTCAAATTGAATTTCACAAAAAAAAAAAAAAAACTCTCCAGGGT