Contig 001193:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019D03Sequence553007467 (2)ref|XP_009624004.1|2e-67PREDICTED: golgin candidate 5 [Nicotiana tomentosiformis] ref|XP_009624005.1| PR783001193 (3)ref|XP_009624004.1|2e-91PREDICTED: golgin candidate 5 [Nicotiana tomentosiformis] ref|XP_009624005.1| PR
JMFF043M11Sequence631007467 (2)ref|XP_011099825.1|2e-82PREDICTED: uncharacterized protein LOC105178143 isoform X2 [Sesamum indicum] re640001193 (3)ref|XP_007046717.1|3e-47Uncharacterized protein isoform 1 [Theobroma cacao] ref|XP_007046718.1| Uncharac
JMFN038M20Sequence433001193 (3)gb|KDP46723.1|1e-13hypothetical protein JCGZ_06511 [Jatropha curcas]

Alignment

This contig is upended


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rJMFF019D03+                                                                TGTGAA
                      ____________________________________________________________
consensus                                                                   TGTGAA
 
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rJMFF019D03+          GGTGACGATAGGAGAGGAAGAGATTNGAAAGAAGGCACTCCAAATCGAAAACATGTCTGT
                      ____________________________________________________________
consensus             GGTGACGATAGGAGAGGAAGAGATTNGAAAGAAGGCACTCCAAATCGAAAACATGTCTGT
 
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rJMFF019D03+          AAAATTAGAAGAGATGGAAAGGTTTGCACTGGGCACGAATTGTATCATAAACGAGATGCG
                      ____________________________________________________________
consensus             AAAATTAGAAGAGATGGAAAGGTTTGCACTGGGCACGAATTGTATCATAAACGAGATGCG
 
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rJMFF019D03+          CCAGAGAGTTGAGGATCTAGTTGAAGAAACTTCTAGACAGAGACAAAGAGCCTCGGAAAA
                      ____________________________________________________________
consensus             CCAGAGAGTTGAGGATCTAGTTGAAGAAACTTCTAGACAGAGACAAAGAGCCTCGGAAAA
 
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rJMFF019D03+          TGATGAGGAGCTTTGTCGCGTCAAGCAAGACTTTGAATCTCTCAAATCCTATGTTAGTAG
rJMFF043M11+                                AAGCAAGACTTTGAATCTCTCAAATCCTATGTTAGTAG
                      ____________________________________________________________
consensus             TGATGAGGAGCTTTGTCGCGTCAAGCAAGACTTTGAATCTCTCAAATCCTATGTTAGTAG
 
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rJMFF019D03+          TCTCATTAGCGTGAGAGAAACTCTCCTTTCATCTGAAAAGCAGTTCCAGACAATCGAAAG
rJMFF043M11+          TCTCATTAGCGTGAGAGAAACTCTCCTTTCATCTGAAAAGCAGTTCCAGACAATCGAAAG
                      ____________________________________________________________
consensus             TCTCATTAGCGTGAGAGAAACTCTCCTTTCATCTGAAAAGCAGTTCCAGACAATCGAAAG
 
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rJMFF019D03+          GCTCTTTGAACGGCTGGTCGCGAAAACAACTCAGTTGGAGAGCGAGAAGGCACAGAAAGA
JMFN038M20-                                                                  AAAGA
rJMFF043M11+          GCTCTTTGAACGGCTGGTCGCGAAAACAACTCAGTTGGAGAGCGAGAAGGCACAGAAAGA
                      ____________________________________________________________
consensus             GCTCTTTGAACGGCTGGTCGCGAAAACAACTCAGTTGGAGAGCGAGAAGGCACAGAAAGA
 
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rJMFF019D03+          GGCTGAAGTCCAGAAACTCATGGAAGAGAACGTGAAGTTGACTGCGTTACTGGACAAGAA
JMFN038M20-           GGCTGAAGTCCAGAAACTCATGGAAGAGAACGTGAAGTTGACTGCGTTACTGGACAAGAA
rJMFF043M11+          GGCTGAAGTCCAGAAACTCATGGAAGAGAACGTGAAGTTGACTGCGTTACTGGACAAGAA
                      ____________________________________________________________
consensus             GGCTGAAGTCCAGAAACTCATGGAAGAGAACGTGAAGTTGACTGCGTTACTGGACAAGAA
 
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rJMFF019D03+          AGAGGCCCAACTCCTGGCCATGAATCAGCAATGCAAGCTCATGGCACTTAGTGCTTTAAA
JMFN038M20-           AGAGGCCCAACTCCTGGCCATGAATCAGCAATGCAAGCTCATGGCACTTAGTGCTTTAAA
rJMFF043M11+          AGAGGCCCAACTCCTGGCCATGAATCAGCAATGCAAGCTCATGGCACTTAGTGCTTTAAA
                      ____________________________________________________________
consensus             AGAGGCCCAACTCCTGGCCATGAATCAGCAATGCAAGCTCATGGCACTTAGTGCTTTAAA
 
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rJMFF019D03+          TGGCTAGTCTGCCACACTTACACAGGCATTTGTGCCCCCGCTTTTATCACATTCAACCCA
JMFN038M20-           TGGCTAGTCTGCCACACTTACACAGGCATTTGTGCCCCCGCTTTTATCACATTCAACCCA
rJMFF043M11+          TGGCTAGTCTGCCACACTTACACAGGCATTTGTGCCCCCGCTTTTATCACATTCAACCCA
                      ____________________________________________________________
consensus             TGGCTAGTCTGCCACACTTACACAGGCATTTGTGCCCCCGCTTTTATCACATTCAACCCA
 
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rJMFF019D03+          CCTGTTGGCCTTCCAGCAGATTTAGGTGAGTGGAGCTGTAGAATTCTGTAAAGGTTCCTT
JMFN038M20-           CCTGTTGGCCTTCCAGCAGATTTAGGTGAGTGGAGCTGTAGAATTCTGTAAAGGTTCCTT
rJMFF043M11+          CCTGTTGGCCTTCCAGCAGATTTAGGTGAGTGGAGCTGTAGAATTCTGTAAAGGTTCCTT
                      ____________________________________________________________
consensus             CCTGTTGGCCTTCCAGCAGATTTAGGTGAGTGGAGCTGTAGAATTCTGTAAAGGTTCCTT
 
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rJMFF019D03+          CTTTTTTTCTCGTGGTTTTAATGGGTGAAACCCAAATGCGTAGTCGTTTTATGTTGGTTG
JMFN038M20-           CTTTTTTTCTCGTGGTTTTAATGGGTGAAACCCAAATGCGTAGTCGTTTTATGTTGGTTG
rJMFF043M11+          CTTTTTTTCTCGTGGTTTTAATGGGTGAAACCCAAATGCGTAGTCGTTTTATGTTGGTTG
                      ____________________________________________________________
consensus             CTTTTTTTCTCGTGGTTTTAATGGGTGAAACCCAAATGCGTAGTCGTTTTATGTTGGTTG
 
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rJMFF019D03+          GCTGATTGGGCAATTTGCCAAAGGAAATTAAAACACCTTTAGATCTGATACAGAACTTTG
JMFN038M20-           GCTGATTGGGCAATTTGCCAAAGGAAATTAAAACACCTTTAGATCTGATACAGAACTTTG
rJMFF043M11+          GCTGATTGGGCAATTTGCCAAAGGAAATTAAAACACCTTTAGATCTGATACAGAACTTTG
                      ____________________________________________________________
consensus             GCTGATTGGGCAATTTGCCAAAGGAAATTAAAACACCTTTAGATCTGATACAGAACTTTG
 
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rJMFF019D03+          TTGCATCCTGTGTGATGCCTGCCTGTGTGACAATGTTCAACAAAA               
JMFN038M20-           TTGCATCCTGTGTGATGCCTGCCTGTGTGACAATGTTCAACAAAAAGCGGCTTTTCGCCT
rJMFF043M11+          TTGCATCCTGTGTGATGCCTGCCTGTGTGACAATGTTCAACAAAAAGCGGCTTTTCGCCT
                      ____________________________________________________________
consensus             TTGCATCCTGTGTGATGCCTGCCTGTGTGACAATGTTCAACAAAAAGCGGCTTTTCGCCT
 
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JMFN038M20-           TGTAGT                                                      
rJMFF043M11+          TGTAGTATAATTGTTCXXXXXXXXXXXXXXXXXXXCTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             TGTAGTATAATTGTTCNNNNNNNNNNNNNNNNNNNCTCTCCAGGGTGATCCGCCATAAGG