Contig 001191:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009P24Sequence562006032 (6)ref|XP_004240846.1|1e-61PREDICTED: tRNA-aminoacylation cofactor arc1 isoform X2 [Solanum lycopersicum]754001191 (5)ref|XP_009778770.1|4e-110PREDICTED: probable methionine--tRNA ligase [Nicotiana sylvestris]
JMFF021I09Sequence575006032 (6)ref|XP_004240846.1|2e-62PREDICTED: tRNA-aminoacylation cofactor arc1 isoform X2 [Solanum lycopersicum]724001191 (5)ref|XP_009778770.1|4e-108PREDICTED: probable methionine--tRNA ligase [Nicotiana sylvestris]
JMFF030O03Sequence540006032 (6)ref|XP_004240846.1|1e-57PREDICTED: tRNA-aminoacylation cofactor arc1 isoform X2 [Solanum lycopersicum]720001191 (5)ref|XP_009778770.1|6e-105PREDICTED: probable methionine--tRNA ligase [Nicotiana sylvestris]
JMFF037H22Sequence564006032 (6)ref|XP_004240846.1|2e-62PREDICTED: tRNA-aminoacylation cofactor arc1 isoform X2 [Solanum lycopersicum]772001191 (5)ref|XP_009778770.1|1e-104PREDICTED: probable methionine--tRNA ligase [Nicotiana sylvestris]
JMFF043J20Sequence609006032 (6)ref|XP_004240846.1|4e-62PREDICTED: tRNA-aminoacylation cofactor arc1 isoform X2 [Solanum lycopersicum]563001191 (5)ref|XP_009590667.1|4e-64PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF021I09+ CAATAAGGAC
                      ____________________________________________________________
consensus CAATAAGGAC
 
. : . : . : . : . : . :
rJMFF021I09+ CAATAAGAAAGTGCCTGAAAAAGAAGTGGATGAGAAGGGATAAAGACATTAGTGTAAGTT
rJMFF030O03+ CAATAAGAAAGTGCCTGAAAAAGAAGTGGATGAGAA-GGATAAAGACATTAGTGTAAGTT
rJMFF037H22+ CAATAAGAAAGTGCCTGAAAAAGAAGTGGATGAGAA-GGATAAAGACATTAGTGTAAGTT
rJMFF009P24+ GGATAAAGACATTAGTGTAAGTT
                      ____________________________________________________________
consensus CAATAAGAAAGTGCCTGAAAAAGAAGTGGATGAGAA-GGATAAAGACATTAGTGTAAGTT
 
. : . : . : . : . : . :
rJMFF021I09+ TGCTTAAAGTACAGATTGGTCATATTCGTAAAGCATGGAAGCATCCATCAGCTGACAGTT
rJMFF030O03+ TGCTTAAAGTACAGATTGGTCATATTCGTAAAGCATGGAAGCATCCATCAGCTGACAGTT
rJMFF037H22+ TGCTTAAAGTACAGATTGGTCATATTCGTAAAGCATGGAAGCATCCATCAGCTGACAGTT
rJMFF009P24+ TGCTTAAAGTACAGATTGGTCATATTCGTAAAGCATGGAAGCATCCATCAGCTGACAGTT
                      ____________________________________________________________
consensus TGCTTAAAGTACAGATTGGTCATATTCGTAAAGCATGGAAGCATCCATCAGCTGACAGTT
 
. : . : . : . : . : . :
rJMFF021I09+ TACTAGTTGAGGAGATAGATGTTGGGGAAGCTAAATGTCGACAAGTGGTCAGTGGTCTGG
rJMFF030O03+ TACTAGTTGAGGAGATAGATGTTGGGGAAGCTAAATGTCGACAAGTGGTCAGTGGTCTGG
rJMFF037H22+ TACTAGTTGAGGAGATAGATGTTGGGGAAGCTAAATGTCGACAAGTGGTCAGTGGTCTGG
rJMFF009P24+ TACTAGTTGAGGAGATAGATGTTGGGGAAGCTAAATGTCGACAAGTGGTCAGTGGTCTGG
                      ____________________________________________________________
consensus TACTAGTTGAGGAGATAGATGTTGGGGAAGCTAAATGTCGACAAGTGGTCAGTGGTCTGG
 
. : . : . : . : . : . :
rJMFF021I09+ CAAAGTATTTCACCCCAGAACAAATGACAAATCGCCTAGTGGTGCTTATCACAAACATGA
rJMFF030O03+ CAAAGTATTTCACCCCAGAACAAATGACAAATCGCCTAGTGGTGCTTATCACAAACATGA
rJMFF037H22+ CAAAGTATTTCACCCCAGAACAAATGACAAATCGCCTAGTGGTGCTTATCACAAACATGA
rJMFF009P24+ CAAAGTATTTCACCCCAGAACAAATGACAAATCGCCTAGTGGTGCTTATCACAAACATGA
rJMFF043J20+ AGTGGTGCTTATCACAAACATGA
                      ____________________________________________________________
consensus CAAAGTATTTCACCCCAGAACAAATGACAAATCGCCTAGTGGTGCTTATCACAAACATGA
 
. : . : . : . : . : . :
rJMFF021I09+ AACCGTCCAAACTTCGAGATGTGGCATCTGAGGGGATGGTACTATGTGCTTCTAATGATG
rJMFF030O03+ AACCGTCCAAACTTCGAGATGTGGCATCTGAGGGGATGGTACTATGTGCTTCTAATGATG
rJMFF037H22+ AACCGTCCAAACTTCGAGATGTGGCATCTGAGGGGATGGTACTATGTGCTTCTAATGATG
rJMFF009P24+ AACCGTCCAAACTTCGAGATGTGGCATCTGAGGGGATGGTACTATGTGCTTCTAATGATG
rJMFF043J20+ AACCGTCCAAACTTCGAGATGTGGCATCTGAGGGGATGGTACTATGTGCTTCTAATGATG
                      ____________________________________________________________
consensus AACCGTCCAAACTTCGAGATGTGGCATCTGAGGGGATGGTACTATGTGCTTCTAATGATG
 
. : . : . : . : . : . :
rJMFF021I09+ ATCACACAGTTGTGGAGCCTCTAATAGCACCGGAAGGGGCAAAAGTTGGGGAATGTGTGT
rJMFF030O03+ ATCACACAGTTGTGGAGCCTCTAATAGCACCGGAAGGGGCAAAAGTTGGGGAATGTGTGT
rJMFF037H22+ ATCACACAGTTGTGGAGCCTCTAATAGCACCGGAAGGGGCAAAAGTTGGGGAATGTGTGT
rJMFF009P24+ ATCACACAGTTGTGGAGCCTCTAATAGCACCGGAAGGGGCAAAAGTTGGGGAATGTGTGT
rJMFF043J20+ ATCACACAGTTGTGGAGCCTCTAATAGCACCGGAAGGGGCAAAAGTTGGGGAATGTGTGT
                      ____________________________________________________________
consensus ATCACACAGTTGTGGAGCCTCTAATAGCACCGGAAGGGGCAAAAGTTGGGGAATGTGTGT
 
. : . : . : . : . : . :
rJMFF021I09+ CTTTTTCTGGACATGATGGAAAACCAGAGGATGTATTGAACCCTAAAAAGAAACAGTTTG
rJMFF030O03+ CTTTTTCTGGACATGATGGAAAACCAGAGGATGTATTGAACCCTAAAAAGAAACAGTTTG
rJMFF037H22+ CTTTTTCTGGACATGATGGAAAACCAGAGGATGTATTGAACCCTAAAAAGAAACAGTTTG
rJMFF009P24+ CTTTTTCTGGACATGATGGAAAACCAGAGGATGTATTGAACCCTAAAAAGAAACAGTTTG
rJMFF043J20+ CTTTTTCTGGACATGATGGAAAACCAGAGGATGTATTGAACCCTAAAAAGAAACAGTTTG
                      ____________________________________________________________
consensus CTTTTTCTGGACATGATGGAAAACCAGAGGATGTATTGAACCCTAAAAAGAAACAGTTTG
 
. : . : . : . : . : . :
rJMFF021I09+ ACAAAATAGCTGTGAACCTCTTCACGGATGACAATGGCGTGGCCACATTCAAGGGTATCC
rJMFF030O03+ ACAAAATAGCTGTGAACCTCTTCACGGATGACAATGGCGTGGCCACATTCAAGGGTATCC
rJMFF037H22+ ACAAAATAGCTGTGAACCTCTTCACGGATGACAATGGCGTGGCCACATTCAAGGGTATCC
rJMFF009P24+ ACAAAATAGCTGTGAACCTCTTCACGGATGACAATGGCGTGGCCACATTCAAGGGTATCC
rJMFF043J20+ ACAAAATAGCTGTGAACCTCTTCACGGATGACAATGGCGTGGCCACATTCAAGGGTATCC
                      ____________________________________________________________
consensus ACAAAATAGCTGTGAACCTCTTCACGGATGACAATGGCGTGGCCACATTCAAGGGTATCC
 
. : . : . : . : . : . :
rJMFF021I09+ CATTCATGACTTCTGCTGGGCCCTGCACATCCTCCCTCCCTCGTGCTAGCATCAAGTGAT
rJMFF030O03+ CATTCATGACTTCTGCTGGGCCCTGCACATCCTCCCTCCCTCGTGCTAGCATCAAGTGAT
rJMFF037H22+ CATTCATGACTTCTGCTGGGCCCTGCACATCCTCCCTCCCTCGTGCTAGCATCAAGTGAT
rJMFF009P24+ CATTCATGACTTCTGCTGGGCCCTGCACATCCTCCCTCCCTCGTGCTAGCATCAAGTGAT
rJMFF043J20+ CATTCATGACTTCTGCTGGGCCCTGCACATCCTCCCTCCCTCGTGCTAGCATCAAGTGAT
                      ____________________________________________________________
consensus CATTCATGACTTCTGCTGGGCCCTGCACATCCTCCCTCCCTCGTGCTAGCATCAAGTGAT
 
. : . : . : . : . : . :
rJMFF021I09+ GGACGCACATTTGAAATCTGCGAGATCGCGAAAATTTTCTCAGTTCAACCTAGATATTAT
rJMFF030O03+ GGACGCACATTTGAAATCTGCGAGATCGCGAAAATTTTCTCAGTTCAACCTAGATATTAT
rJMFF037H22+ GGACGCACATTTGAAATCTGCGAGATCGCGAAAATTTTCTCAGTTCAACCTAGATATTAT
rJMFF009P24+ GGACGCACATTTGAAATCTGCGAGATCGCGAAAATTTTCTCAGTTCAACCTAGATATTAT
rJMFF043J20+ GGACGCACATTTGAAATCTGCGAGATCGCGAAAATTTTCTCAGTTCAACCTAGATATTAT
                      ____________________________________________________________
consensus GGACGCACATTTGAAATCTGCGAGATCGCGAAAATTTTCTCAGTTCAACCTAGATATTAT
 
. : . : . : . : . : . :
rJMFF021I09+ AATGATTATCTTTTGTAGAGCAAACTGCATTTTGTTGGAAAAGTTTTGGTTAGCTGGAGT
rJMFF030O03+ AATGATTATCTTTTGTAGAGCAAACTGCATTTTGTTGGAAAAGTTTTGGTTAGCTGGAGT
rJMFF037H22+ AATGATTATCTTTTGTAGAGCAAACTGCATTTTGTTGGAAAAGTTTTGGTTAGCTGGAGT
rJMFF009P24+ AATGATTATCTTTTGTAGAGCAAACTGCATTTTGTTGGAAAAGTTTTGGTTAGCTGGAGT
rJMFF043J20+ AATGATTATCTTTTGTAGAGCAAACTGCATTTTGTTGGAAAAGTTTTGGTTAGCTGGAGT
                      ____________________________________________________________
consensus AATGATTATCTTTTGTAGAGCAAACTGCATTTTGTTGGAAAAGTTTTGGTTAGCTGGAGT
 
. : . : . : . : . : . :
rJMFF021I09+ TGTGCTGTATGTTGTAGTATTCTACAGTGATGGGATATGAATGGCGACCGTACC
rJMFF030O03+ TGTGCTGTATGTTGTAGTATTCTACAGTGATGGGATATGAATGGCGACCGTACCTTGAAA
rJMFF037H22+ TGTGCTGTATGTTGTAGTATTCTACAGTGATGGGATATGAATGGCGACCGTACCTTGAAA
rJMFF009P24+ TGTGCTGTATGTTGTAGTATTCTACAGTGATGGGATATGAATGGCGACCGTACCTTGAAA
rJMFF043J20+ TGTGCTGTATGTTGTAGTATTCTACAGTGATGGGATATGAATGGCGACCGTACCTTGAAA
                      ____________________________________________________________
consensus TGTGCTGTATGTTGTAGTATTCTACAGTGATGGGATATGAATGGCGACCGTACCTTGAAA
 
. : . : . : . : . : . :
rJMFF030O03+ A
rJMFF037H22+ ATCTATGCAGAAATGCCATTGACACGTTTTGTCTT
rJMFF009P24+ ATCTATGCAGAAATGCCATTGACACGTTTTGTCTT
rJMFF043J20+ ATCTATGCAGAAATGCCATTGACACGTTTTGTCTTTGAAAATCTCAAAGATCATGACTGC
                      ____________________________________________________________
consensus ATCTATGCAGAAATGCCATTGACACGTTTTGTCTTTGAAAATCTCAAAGATCATGACTGC