| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF005A24 | Sequence | 452 | 000999 (6) | gb|AFA35955.1| | 4e-59 | ent-kaurenoic acid oxidase, partial [Nicotiana attenuata] | 756 | 001190 (5) | ref|XP_009589785.1| | 3e-126 | PREDICTED: ent-kaurenoic acid oxidase 1-like isoform X2 [Nicotiana tomentosifor |
| JMFF007I04 | Sequence | 563 | 000999 (6) | gb|AFA35955.1| | 5e-84 | ent-kaurenoic acid oxidase, partial [Nicotiana attenuata] | 763 | 001190 (5) | ref|XP_009589785.1| | 5e-128 | PREDICTED: ent-kaurenoic acid oxidase 1-like isoform X2 [Nicotiana tomentosifor |
| JMFF022G01 | Sequence | 401 | 000999 (6) | gb|AFA35955.1| | 4e-41 | ent-kaurenoic acid oxidase, partial [Nicotiana attenuata] | 765 | 001190 (5) | ref|XP_009589785.1| | 6e-126 | PREDICTED: ent-kaurenoic acid oxidase 1-like isoform X2 [Nicotiana tomentosifor |
| JMFF025O04 | Sequence | 577 | 000999 (6) | gb|AFA35955.1| | 7e-87 | ent-kaurenoic acid oxidase, partial [Nicotiana attenuata] | 795 | 001190 (5) | ref|XP_009589785.1| | 2e-132 | PREDICTED: ent-kaurenoic acid oxidase 1-like isoform X2 [Nicotiana tomentosifor |
| JMFF043I14 | Sequence | 633 | 000999 (6) | gb|AFA35955.1| | 8e-97 | ent-kaurenoic acid oxidase, partial [Nicotiana attenuata] | 618 | 001190 (5) | ref|XP_009797769.1| | 2e-90 | PREDICTED: ent-kaurenoic acid oxidase 1-like, partial [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMFF007I04+ A
rJMFF022G01+ A
rJMFF025O04+ TTCATGAGAAGAGAGACATGATGGATAGACTAATGGA
____________________________________________________________
consensus TTCATGAGAAGAGAGACATGATGGATAGACTAATGGA
. : . : . : . : . : . :
rJMFF005A24+ GTTAAAGATGAGAATGGGAGAGAGCTGGATGACGAGGAAATAATTGATGTTCTAGTGAT
rJMFF007I04+ AGTTAAAGATGAGAATGGGAGAGAGCTGGATGACGAGGAAATAATTGATGTTCTAGTGAT
rJMFF022G01+ AGTTAAAGATGAGAATGGGAGAGAGCTGGATGACGAGGAAATAATTGATGTTCTAGTGAT
rJMFF025O04+ AGTTAAAGATGAGAATGGGAGAGAGCTGGATGACGAGGAAATAATTGATGTTCTAGTGAT
____________________________________________________________
consensus AGTTAAAGATGAGAATGGGAGAGAGCTGGATGACGAGGAAATAATTGATGTTCTAGTGAT
. : . : . : . : . : . :
rJMFF005A24+ GTACTTAAATGCTGGACATGAATCATCAGGCCATATCACAATGTGGGCTACAGTGTTTCT
rJMFF007I04+ GTACTTAAATGCTGGACATGAATCATCAGGCCATATCACAATGTGGGCTACAGTGTTTCT
rJMFF022G01+ GTACTTAAATGCTGGACATGAATCATCAGGCCATATCACAATGTGGGCTACAGTGTTTCT
rJMFF025O04+ GTACTTAAATGCTGGACATGAATCATCAGGCCATATCACAATGTGGGCTACAGTGTTTCT
____________________________________________________________
consensus GTACTTAAATGCTGGACATGAATCATCAGGCCATATCACAATGTGGGCTACAGTGTTTCT
. : . : . : . : . : . :
rJMFF005A24+ GCAGAGCCACCCTGAGGCCTTCAAAAGAGCCAAGGCAGAGCAAGAGGAAATCGTGCGAAA
rJMFF007I04+ GCAGAGCCACCCTGAGGCCTTCAAAAGAGCCAAGGCAGAGCAAGAGGAAATCGTGCGAAA
rJMFF022G01+ GCAGAGCCACCCTGAGGCCTTCAAAAGAGCCAAGGCAGAGCAAGAGGAAATCGTGCGAAA
rJMFF025O04+ GCAGAGCCACCCTGAGGCCTTCAAAAGAGCCAAGGCAGAGCAAGAGGAAATCGTGCGAAA
rJMFF043I14+ AGAGGAAATCGTGCGAAA
____________________________________________________________
consensus GCAGAGCCACCCTGAGGCCTTCAAAAGAGCCAAGGCAGAGCAAGAGGAAATCGTGCGAAA
. : . : . : . : . : . :
rJMFF005A24+ TATGCCTCCTGATCAGAAGGGTTTGACACTGAGAGAGATCCGACAGATGGAGTATCTATC
rJMFF007I04+ TATGCCTCCTGATCAGAAGGGTTTGACACTGAGAGAGATCCGACAGATGGAGTATCTATC
rJMFF022G01+ TATGCCTCCTGATCAGAAGGGTTTGACACTGAGAGAGATCCGACAGATGGAGTATCTATC
rJMFF025O04+ TATGCCTCCTGATCAGAAGGGTTTGACACTGAGAGAGATCCGACAGATGGAGTATCTATC
rJMFF043I14+ TATGCCTCCTGATCAGAAGGGTTTGACACTGAGAGAGATCCGACAGATGGAGTATCTATC
____________________________________________________________
consensus TATGCCTCCTGATCAGAAGGGTTTGACACTGAGAGAGATCCGACAGATGGAGTATCTATC
. : . : . : . : . : . :
rJMFF005A24+ TAAGGTGATTGACGAAACACTTCGTCTGGTAACGTTCTCTCTCACCGTGTTCCGAGAGGC
rJMFF007I04+ TAAGGTGATTGACGAAACACTTCGTCTGGTAACGTTCTCTCTCACCGTGTTCCGAGAGGC
rJMFF022G01+ TAAGGTGATTGACGAAACACTTCGTCTGGTAACGTTCTCTCTCACCGTGTTCCGAGAGGC
rJMFF025O04+ TAAGGTGATTGACGAAACACTTCGTCTGGTAACGTTCTCTCTCACCGTGTTCCGAGAGGC
rJMFF043I14+ TAAGGTGATTGACGAAACACTTCGTCTGGTAACGTTCTCTCTCACCGTGTTCCGAGAGGC
____________________________________________________________
consensus TAAGGTGATTGACGAAACACTTCGTCTGGTAACGTTCTCTCTCACCGTGTTCCGAGAGGC
. : . : . : . : . : . :
rJMFF005A24+ AAAGAAGGATGTGAATGTTTCGGGATATACAATTCCAGAGGGATGGAAAGTTTTGGTGTG
rJMFF007I04+ AAAGAAGGATGTGAATGTTTCGGGATATACAATTCCAGAGGGATGGAAAGTTTTGGTGTG
rJMFF022G01+ AAAGAAGGATGTGAATGTTTCGGGATATACAATTCCAGAGGGATGGAAAGTTTTGGTGTG
rJMFF025O04+ AAAGAAGGATGTGAATGTTTCGGGATATACAATTCCAGAGGGATGGAAAGTTTTGGTGTG
rJMFF043I14+ AAAGAAGGATGTGAATGTTTCGGGATATACAATTCCAGAGGGATGGAAAGTTTTGGTGTG
____________________________________________________________
consensus AAAGAAGGATGTGAATGTTTCGGGATATACAATTCCAGAGGGATGGAAAGTTTTGGTGTG
. : . : . : . : . : . :
rJMFF005A24+ GTTTAGAGGTGTGCACTTAGATGAGGAGATATATGAAGACCCATTAACATTCAATCCTTC
rJMFF007I04+ GTTTAGAGGTGTGCACTTAGATGAGGAGATATATGAAGACCCATTAACATTCAATCCTTC
rJMFF022G01+ GTTTAGAGGTGTGCACTTAGATGAGGAGATATATGAAGACCCATTAACATTCAATCCTTC
rJMFF025O04+ GTTTAGAGGTGTGCACTTAGATGAGGAGATATATGAAGACCCATTAACATTCAATCCTTC
rJMFF043I14+ GTTTAGAGGTGTGCACTTAGATGAGGAGATATATGAAGACCCATTAACATTCAATCCTTC
____________________________________________________________
consensus GTTTAGAGGTGTGCACTTAGATGAGGAGATATATGAAGACCCATTAACATTCAATCCTTC
. : . : . : . : . : . :
rJMFF005A24+ CAGATGGGATAATTTTACACCAAGAGCAGGAGCATTTCTTCCCTTTGGAGCAGGAAGCAG
rJMFF007I04+ CAGATGGGATAATTTTACACCAAGAGCAGGAGCATTTCTTCCCTTTGGAGCAGGAAGCAG
rJMFF022G01+ CAGATGGGATAATTTTACACCAAGAGCAGGAGCATTTCTTCCCTTTGGAGCAGGAAGCAG
rJMFF025O04+ CAGATGGGATAATTTTACACCAAGAGCAGGAGCATTTCTTCCCTTTGGAGCAGGAAGCAG
rJMFF043I14+ CAGATGGGATAATTTTACACCAAGAGCAGGAGCATTTCTTCCCTTTGGAGCAGGAAGCAG
____________________________________________________________
consensus CAGATGGGATAATTTTACACCAAGAGCAGGAGCATTTCTTCCCTTTGGAGCAGGAAGCAG
. : . : . : . : . : . :
rJMFF005A24+ ATTGTGCCCAGGAAACGACCTTGCCAAACTCGAAATCTCCATTTTTCTTCACTATTTTCT
rJMFF007I04+ ATTGTGCCCAGGAAACGACCTTGCCAAACTCGAAATCTCCATTTTTCTTCACTATTTTCT
rJMFF022G01+ ATTGTGCCCAGGAAACGACCTTGCCAAACTCGAAATCTCCATTTTTCTTCACTATTTTCT
rJMFF025O04+ ATTGTGCCCAGGAAACGACCTTGCCAAACTCGAAATCTCCATTTTTCTTCACTATTTTCT
rJMFF043I14+ ATTGTGCCCAGGAAACGACCTTGCCAAACTCGAAATCTCCATTTTTCTTCACTATTTTCT
____________________________________________________________
consensus ATTGTGCCCAGGAAACGACCTTGCCAAACTCGAAATCTCCATTTTTCTTCACTATTTTCT
. : . : . : . : . : . :
rJMFF005A24+ ACTGGGTTACGAGTTAGAGAGGAAAAATCCAGACTGCCCACTTATGTATTTACCACACAC
rJMFF007I04+ ACTGGGTTACGAGTTAGAGAGGAAAAATCCAGACTGCCCACTTATGTATTTACCACACAC
rJMFF022G01+ ACTGGGTTACGAGTTAGAGAGGAAAAATCCAGACTGCCCACTTATGTATTTACCACACAC
rJMFF025O04+ ACTGGGTTACGAGTTAGAGAGGAAAAATCCAGACTGCCCACTTATGTATTTACCACACAC
rJMFF043I14+ ACTGGGTTACGAGTTAGAGAGGAAAAATCCAGACTGCCCACTTATGTATTTACCACACAC
____________________________________________________________
consensus ACTGGGTTACGAGTTAGAGAGGAAAAATCCAGACTGCCCACTTATGTATTTACCACACAC
. : . : . : . : . : . :
rJMFF005A24+ CAGGCCTAAAGACAACTGCCTGGGTAGAGTAAGAAGATCAGTCTCATCATCTTCAACCGT
rJMFF007I04+ CAGGCCTAAAGACAACTGCCTGGGTAGAGTAAGAAGATCAGTCTCATCATCTTCAACCGT
rJMFF022G01+ CAGGCCTAAAGACAACTGCCTGGGTAGAGTAAGAAGATCAGTCTCATCATCTTCAACCGT
rJMFF025O04+ CAGGCCTAAAGACAACTGCCTGGGTAGAGTAAGAAGATCAGTCTCATCATCTTCAACCGT
rJMFF043I14+ CAGGCCTAAAGACAACTGCCTGGGTAGAGTAAGAAGATCAGTCTCATCATCTTCAACCGT
____________________________________________________________
consensus CAGGCCTAAAGACAACTGCCTGGGTAGAGTAAGAAGATCAGTCTCATCATCTTCAACCGT
. : . : . : . : . : . :
rJMFF005A24+ CTAGACAATAAATAATCTCCAAATTATATCTAATGTCTGGTCTCTCTTTAAAATTAGTCC
rJMFF007I04+ CTAGACAATAAATAATCTCCAAATTATATCTAATGTCTGGTCTCTCTTTAAAATTAGTCC
rJMFF022G01+ CTAGACAATAAATAATCTCCAAATTATATCTAATGTCTGGTCTCTCTTTAAAATTAGTCC
rJMFF025O04+ CTAGACAATAAATAATCTCCAAATTATATCTAATGTCTGGTCTCTCTTTAAAATTAGTCC
rJMFF043I14+ CTAGACAATAAATAATCTCCAAATTATATCTAATGTCTGGTCTCTCTTTAAAATTAGTCC
____________________________________________________________
consensus CTAGACAATAAATAATCTCCAAATTATATCTAATGTCTGGTCTCTCTTTAAAATTAGTCC
. : . : . : . : . : . :
rJMFF005A24+ CTGTTATCTTCTGTTTTCACTTTTAATTTCCTATCAA
rJMFF007I04+ CTGTTATCTTCT
rJMFF022G01+ CTGTTATCTTCT
rJMFF025O04+ CTGTTATCTTCTGTTTTCACTTTTAATTTCCTATCAA
rJMFF043I14+ CTGTTATCTTCTGTTTTCACTTTTAATTTCCTATCAATTAAAAATTAGTGTTCGATGACC
____________________________________________________________
consensus CTGTTATCTTCTGTTTTCACTTTTAATTTCCTATCAATTAAAAATTAGTGTTCGATGACC