| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF016H11 | Sequence | 537 | 008019 (19) | ref|XP_006353741.1| | 8e-49 | PREDICTED: organic cation/carnitine transporter 7-like [Solanum tuberosum] | 774 | 001187 (7) | ref|XP_011093913.1| | 4e-76 | PREDICTED: organic cation/carnitine transporter 7-like isoform X1 [Sesamum indi |
| JMFF022I05 | Sequence | 514 | 008019 (19) | ref|XP_006353741.1| | 1e-48 | PREDICTED: organic cation/carnitine transporter 7-like [Solanum tuberosum] | 710 | 001187 (7) | ref|XP_011093913.1| | 4e-75 | PREDICTED: organic cation/carnitine transporter 7-like isoform X1 [Sesamum indi |
| JMFF043F14 | Sequence | 640 | 008019 (19) | ref|XP_006353741.1| | 3e-75 | PREDICTED: organic cation/carnitine transporter 7-like [Solanum tuberosum] | 570 | 001187 (7) | ref|XP_011093913.1| | 1e-57 | PREDICTED: organic cation/carnitine transporter 7-like isoform X1 [Sesamum indi |
| JMSF007E04 | Sequence | 390 | 000721 (4) | emb|CDP14264.1| | 4e-28 | unnamed protein product [Coffea canephora] | 774 | 001187 (7) | ref|XP_011093914.1| | 4e-78 | PREDICTED: organic cation/carnitine transporter 7-like isoform X2 [Sesamum indi |
| JMSF029C09 | Sequence | 661 | 008019 (19) | ref|XP_006353741.1| | 3e-78 | PREDICTED: organic cation/carnitine transporter 7-like [Solanum tuberosum] | 767 | 001187 (7) | ref|XP_011093914.1| | 4e-75 | PREDICTED: organic cation/carnitine transporter 7-like isoform X2 [Sesamum indi |
| JMSF039J11 | Sequence | 717 | 008019 (19) | ref|XP_006353741.1| | 9e-90 | PREDICTED: organic cation/carnitine transporter 7-like [Solanum tuberosum] | 867 | 001187 (7) | ref|XP_006353741.1| | 1e-91 | PREDICTED: organic cation/carnitine transporter 7-like [Solanum tuberosum] |
| JMSF042P17 | Sequence | 759 | 008019 (19) | ref|XP_006353741.1| | 2e-96 | PREDICTED: organic cation/carnitine transporter 7-like [Solanum tuberosum] | 625 | 001187 (7) | gb|EYU25780.1| | 9e-60 | hypothetical protein MIMGU_mgv1a005148mg [Erythranthe guttata] |
This contig is upended
. : . : . : . : . : . :
rJMSF039J11+ TCTCC
____________________________________________________________
consensus TCTCC
. : . : . : . : . : . :
rJMSF039J11+ TAGGTATTTATGTACCATTGGTAGGATAAAAGATGCTCATAGCATTTTACAAAAGATAGC
____________________________________________________________
consensus TAGGTATTTATGTACCATTGGTAGGATAAAAGATGCTCATAGCATTTTACAAAAGATAGC
. : . : . : . : . : . :
rJMSF007E04+ CTTCCGGTTGGAATGCTTGTTTGTGAGCAAATGACTGTGGT
rJMSF039J11+ TGAAGTGAATCAGACAAAACTTCCGGTTGGAATGCTTGTTTGTGAGCAAATGACTGTGGT
rJMSF029C09+ TTGTGAGCAAATGACTGTGGT
rJMFF016H11+ TGTGAGCAAATGACTGTGGT
____________________________________________________________
consensus TGAAGTGAATCAGACAAAACTTCCGGTTGGAATGCTTGTTTGTGAGCAAATGACTGTGGT
. : . : . : . : . : . :
rJMSF007E04+ CAATCAAGAAGCATTATTACCCACGCAAAACAACAGCTATGCTAGATATAAAGCCGGATT
rJMSF039J11+ CAATCAAGAAGCATTATTACCCACGCAAAACAACAGCTATGCTAGATATAAAGCCGGATT
rJMSF029C09+ CAATCAAGAAGCATTATTACCCACGCAAAACAACAGCTATGCTAGATATAAAGCCGGATT
rJMFF016H11+ CAATCAAGAAGCATTATTACCCACGCAAAACAACAGCTATGCTAGATATAAAGCCGGATT
rJMFF022I05+ ATATAAAGCCGGATT
____________________________________________________________
consensus CAATCAAGAAGCATTATTACCCACGCAAAACAACAGCTATGCTAGATATAAAGCCGGATT
. : . : . : . : . : . :
rJMSF007E04+ TTCATCTCTGTTTTCAATTTGTTCATCCAGTTTGATAGGAACTACCCTTGTCATATGGGT
rJMSF039J11+ TTCATCTCTGTTTTCAATTTGTTCATCCAGTTTGATAGGAACTACCCTTGTCATATGGGT
rJMSF029C09+ TTCATCTCTGTTTTCAATTTGTTCATCCAGTTTGATAGGAACTACCCTTGTCATATGGGT
rJMFF016H11+ TTCATCTCTGTTTTCAATTTGTTCATCCAGTTTGATAGGAACTACCCTTGTCATATGGGT
rJMSF042P17+ GT
rJMFF022I05+ TTCATCTCTGTTTTCAATTTGTTCATCCAGTTTGATAGGAACTACCCTTGTCATATGGGT
____________________________________________________________
consensus TTCATCTCTGTTTTCAATTTGTTCATCCAGTTTGATAGGAACTACCCTTGTCATATGGGT
. : . : . : . : . : . :
rJMSF007E04+ GCAATATTTTGGGAATGCATTTCTATATTATGGGGTTGTTCTGATGACCTCAGAGCTTAG
rJMSF039J11+ GCAATATTTTGGGAATGCATTTCTATATTATGGGGTTGTTCTGATGACCTCAGAGCTTAG
rJMSF029C09+ GCAATATTTTGGGAATGCATTTCTATATTATGGGGTTTTTCTGATGACCTCAGAGCTTAG
rJMFF016H11+ GCAATATTTTGGGAATGCATTTCTATATTATGGGGTTGTTCTGATGACCTCAGAGCTTAG
rJMSF042P17+ GCAATATTTTGGGAATGCATTTCTATATTATGGGGTTGTTCTGATGACCTCAGAGCTTAG
rJMFF022I05+ GCAATATTTTGGGAATGCATTTCTATATTATGGGGTTGTTCTGATGACCTCAGAGCTTAG
____________________________________________________________
consensus GCAATATTTTGGGAATGCATTTCTATATTATGGGGTTGTTCTGATGACCTCAGAGCTTAG
. : . : . : . : . : . :
rJMSF007E04+ CAGCGA-CCAAACTAGCTGCATCTCAACTATTTCAGACTCAAATGACGGGTCTAGCCTCT
rJMSF039J11+ CAGCGA-CCAAACTAGCTGCATCTCAACTATTTCAGACTCAAATGACGGGTCTAGCCTCT
rJMSF029C09+ CAGCGA-CCAAACTAGCTGCATCTCAACTATTTCAGACTCAAATGACGGGTCTAGCCTCT
rJMFF016H11+ CAGCGA-CCAAACTAGCTGCATCTCAACTATTTCAGACTCAAATGACGGGTCTAGCCTCT
rJMSF042P17+ CAGCGACCCAAACTAGCTGCATCTCAACTATTTCAGACTCAAATGACGGGTCTAGCCTCT
rJMFF022I05+ CAGCGA-CCAAACTAGCTGCATCTCAACTATTTCAGACTCAAATGACGGGTCTAGCCTCT
rJMFF043F14+ ATTTCAGACTCAAATGACGGGTCTAGCCTCT
____________________________________________________________
consensus CAGCGA-CCAAACTAGCTGCATCTCAACTATTTCAGACTCAAATGACGGGTCTAGCCTCT
. : . : . : . : . : . :
rJMSF007E04+ ATAGAGATGTCTTTTTCACCAGTCTAGCGGAGGTTCCTGGTCTTATTTTAGCAGCAGTCC
rJMSF039J11+ ATAGAGATGTCTTTTTCACCAGTCTAGCGGAGGTTCCTGGTCTTATTTTAGCAGCAGTCC
rJMSF029C09+ ATAGAGATGTCTTTTTCACCAGTCTAGCGGAGGTTCCTGGTCTTATTTTAGCAGCAGTCC
rJMFF016H11+ ATAGAGATGTCTTTTTCACCAGTCTAGCGGAGGTTCCTGGTCTTATTTTAGCAGCAGTCC
rJMSF042P17+ ATAGAGATGTCTTTTTCACCAGTCTAGCGGAGGTTCCTGGTCTTATTTTAGCAGCAGTCC
rJMFF022I05+ ATAGAGATGTCTTTTTCACCAGTCTAGCGGAGGTTCCTGGTCTTATTTTAGCAGCAGTCC
rJMFF043F14+ ATAGAGATGTCTTTTTCACCAGTCTAGCGGAGGTTCCTGGTCTTATTTTAGCAGCAGTCC
____________________________________________________________
consensus ATAGAGATGTCTTTTTCACCAGTCTAGCGGAGGTTCCTGGTCTTATTTTAGCAGCAGTCC
. : . : . : . : . : . :
rJMSF007E04+ TTGTGGACAAAATAGGTCGAAAATTCTCAATGATGTTTATGTATGCATTGGGCTTCCTAT
rJMSF039J11+ TTGTGGACAAAATAGGTCGAAAATTCTCAATGATGTTTATGTATGCATTGGGCTTCCTAT
rJMSF029C09+ TTGTGGACAAAATAGGTCGAAAATTCTCAATGATGTTTATGTATGCATTGGGCTTCCTAT
rJMFF016H11+ TTGTGGACAAAATAGGTCGAAAATTCTCAATGATGTTTATGTATGCATTGGGCTTCCTAT
rJMSF042P17+ TTGTGGACAAAATAGGTCGAAAATTCTCAATGATGTTTATGTATGCATTGGGCTTCCTAT
rJMFF022I05+ TTGTGGACAAAATAGGTCGAAAATTCTCAATGATGTTTATGTATGCATTGGGCTTCCTAT
rJMFF043F14+ TTGTGGACAAAATAGGTCGAAAATTCTCAATGATGTTTATGTATGCATTGGGCTTCCTAT
____________________________________________________________
consensus TTGTGGACAAAATAGGTCGAAAATTCTCAATGATGTTTATGTATGCATTGGGCTTCCTAT
. : . : . : . : . : . :
rJMSF007E04+ TTCTTTTACCACTTGTTTTACATCAGGATGAGGCTTTAACTACTCTCTTATTATCTGGAG
rJMSF039J11+ TTCTTTTACCACTTGTTTTACATCAGGATGAGGCTTTAACTACTCTCTTATTATCTGGAG
rJMSF029C09+ TTCTTTTACCACTTGTTTTACATCAGGATGAGGCTTTAACTACTCTCTTATTATCTGGAG
rJMFF016H11+ TTCTTTTACCACTTGTTTTACATCAGGATGAGGCTTTAACTACTCTCTTATTATCTGGAG
rJMSF042P17+ TTCTTTTACCACTTGTTTTACATCAGGATGAGGCTTTAACTACTCTCTTATTATCTGGAG
rJMFF022I05+ TTCTTTTACCACTTGTTTTACATCAGGATGAGGCTTTAACTACTCTCTTATTATCTGGAG
rJMFF043F14+ TTCTTTTACCACTTGTTTTACATCAGGATGAGGCTTTAACTACTCTCTTATTATCTGGAG
____________________________________________________________
consensus TTCTTTTACCACTTGTTTTACATCAGGATGAGGCTTTAACTACTCTCTTATTATCTGGAG
. : . : . : . : . : . :
rJMSF007E04+ CTCGCATGTGTTGTCTTGGAACATTCACAATTACTGTTATATTTTGTCCTGAGATATATC
rJMSF039J11+ CTCGCATGTGTTGTCTTGGAACATTCACAATTACTGTTATATTTTGTCCTGAGATATATC
rJMSF029C09+ CTCGCATGTGTTGTCTTGGAACATTCACAATTACTGTTATATTTTGTCCTGAGATATATC
rJMFF016H11+ CTCGCATGTGTTGTCTTGGAACATTCACAATTACTGTTATATTTTGTCCTGAGATATATC
rJMSF042P17+ CTCGCATGTGTTGTCTTGGAACATTCACAATTACTGTTATATTTTGTCCTGAGATATATC
rJMFF022I05+ CTCGCATGTGTTGTCTTGGAACATTCACAATTACTGTTATATTTTGTCCTGAGATATATC
rJMFF043F14+ CTCGCATGTGTTGTCTTGGAACATTCACAATTACTGTTATATTTTGTCCTGAGATATATC
____________________________________________________________
consensus CTCGCATGTGTTGTCTTGGAACATTCACAATTACTGTTATATTTTGTCCTGAGATATATC
. : . : . : . : . : . :
rJMSF007E04+ CTACCTCCGTCAGGACAACTGGTGCTGGAGTTGCCAACTCCGTTGGACGAATTGCGGGCA
rJMSF039J11+ CTACCTCCGTCAGGACAACTGGTGCTGGAGTTGCCAACTCCGTTGGACGAATTGCGGGCA
rJMSF029C09+ CTACCTCCGTCAGGACAACTGGTGCTGGAGTTGCCAACTCCGTTGGACGAATTGCGGGCA
rJMFF016H11+ CTACCTCCGTCAGGACAACTGGTGCTGGAGTTGCCAACTCCGTTGGACGAATTGCGGGCA
rJMSF042P17+ CTACCTCCGTCAGGACAACTGGTGCTGGAGTTGCCAACTCCGTTGGACGAATTGCGGGCA
rJMFF022I05+ CTACCTCCGTCAGGACAACTGGTGCTGGAGTTGCCAACTCCGTTGGACGAATTGCGGGCA
rJMFF043F14+ CTACCTCCGTCAGGACAACTGGTGCTGGAGTTGCCAACTCCGTTGGACGAATTGCGGGCA
____________________________________________________________
consensus CTACCTCCGTCAGGACAACTGGTGCTGGAGTTGCCAACTCCGTTGGACGAATTGCGGGCA
. : . : . : . : . : . :
rJMSF007E04+ TGATCTGTCCTATTGTTGCTGTTCAATTTGTTTCGGGGTGTGAAATAATGGCTGCCATAA
rJMSF039J11+ TGATCTGTCCTATTGTTGCTGTTCAATTTGTTTCGGGGTGTGAAATAATGGCTGCCATAA
rJMSF029C09+ TGATCTGTCCTATTGTTGCTGTTCAATTTGTTTCGGGGTGTGAAATAATGGCTGCCATAA
rJMFF016H11+ TGATCTGTCCTATTGTTGCTGTTCAATTTGTTTCGGGGTGTGAAATAATGGCTGCCATAA
rJMSF042P17+ TGATCTGTCCTATTGTTGCTGTTCAATTTGTTTCGGGGTGTGAAATAATGGCTGCCATAA
rJMFF022I05+ TGATCTGTCCTATTGTTGCTGTTCAATTTGTTTCGGGGTGTGAAATAATGGCTGCCATAA
rJMFF043F14+ TGATCTGTCCTATTGTTGCTGTTCAATTTGTTTCGGGGTGTGAAATAATGGCTGCCATAA
____________________________________________________________
consensus TGATCTGTCCTATTGTTGCTGTTCAATTTGTTTCGGGGTGTGAAATAATGGCTGCCATAA
. : . : . : . : . : . :
rJMSF007E04+ TTTTATTTGAGGTTATAGCAGTTGTTTTAGGACTTAGTGTTCTGCTTTTCCCCACGGAAA
rJMSF039J11+ TTTTATTTGAGGTTATAGCAGTTGTTTTAGGACTTAGTGTTCTGCTTTTCCCCACGGAAA
rJMSF029C09+ TTTTATTTGAGGTTATAGCAGTTGTTTTAGGACTTAGTGTTCTGCTTTTCCCCACGGAAA
rJMFF016H11+ TTTTATTTGAGGTTATAGCAGTTGTTTTAGGACTTAGTGTTCTGCTTTTCCCCACGGAAA
rJMSF042P17+ TTTTATTTGAGGTTATAGCAGTTGTTTTAGGACTTAGTGTTCTGCTTTTCCCCACGGAAA
rJMFF022I05+ TTTTATTTGAGGTTATAGCAGTTGTTTTAGGACTTAGTGTTCTGCTTTTCCCCACGGAAA
rJMFF043F14+ TTTTATTTGAGGTTATAGCAGTTGTTTTAGGACTTAGTGTTCTGCTTTTCCCCACGGAAA
____________________________________________________________
consensus TTTTATTTGAGGTTATAGCAGTTGTTTTAGGACTTAGTGTTCTGCTTTTCCCCACGGAAA
. : . : . : . : . : . :
rJMSF007E04+ CCAAGGGCCAGCAACTTAGTGATGCGGTGGTTGCTTCATG-AACATTTGTTTCCGACTA-
rJMSF039J11+ CCAAGGGCCAGCAACTTAGTGATGCGGTGGTTGCTTCATGAAACATTTGTTTCCGACTAT
rJMSF029C09+ CCAAGGGCCAGCAACTTAGTGATGCGGTGGTTGCTTCATG-AACATTTGTTTCCGACTAT
rJMFF016H11+ CCAAGGGCCAGCAACTTAGTGATGCGGTGGTTGCTTCATG-AACATTTGTTTCCGACTAT
rJMSF042P17+ CCAAGGGCCAGCAACTTAGTGATGCGGTGGTTGCTTCATG-AACATTTGTTTCCGACTAT
rJMFF022I05+ CCAAGGGCCAGCAACTTAGTGATGCGGTGGTTGCTTCATG-AACATTTGTTTCCGACTAT
rJMFF043F14+ CCAAGGGCCAGCAACTTAGTGATGCGGTGGTTGCTTCATG-AACATTTGTTTCCGACTAT
____________________________________________________________
consensus CCAAGGGCCAGCAACTTAGTGATGCGGTGGTTGCTTCATG-AACATTTGTTTCCGACTAT
. : . : . : . : . : . :
rJMSF007E04+ TGAAACGAAAAACTAC
rJMSF039J11+ TGAAACGAAAAACTA
rJMSF029C09+ TGAAACGAAAAACTACT
rJMFF016H11+ TGAAACGAAAAACTACTACGTGCTACGCTTCTCAGT
rJMSF042P17+ TGAAACGAAAAA
rJMFF022I05+ TGAAACGAAAAACTACTACGTGCTACGCTTCTCAGTA
rJMFF043F14+ TGAAACGGAAAACTACTACGTGCTACGCTTCTCAGTATTCTTAATAAAATATTTATTCGC
____________________________________________________________
consensus TGAAACGAAAAACTACTACGTGCTACGCTTCTCAGTATTCTTAATAAAATATTTATTCGC