Contig 001184:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF045G08-                                            GGGCGATCGCCGTCCGTAACTAAGGAG
                      ____________________________________________________________
consensus                                              GGGCGATCGCCGTCCGTAACTAAGGAG
 
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JMSF045G08-           AATCAAACACAGGGCAATTAGGAGAAGCACAGCCGAAGAAACACAGCAAACAAATTAGTG
                      ____________________________________________________________
consensus             AATCAAACACAGGGCAATTAGGAGAAGCACAGCCGAAGAAACACAGCAAACAAATTAGTG
 
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JMSF045G08-           CAGCAAAAGCGTCCTAAGGAGAATCAAAACTAAAGCGAAAGGAAATCTGATTTTGTCTCT
                      ____________________________________________________________
consensus             CAGCAAAAGCGTCCTAAGGAGAATCAAAACTAAAGCGAAAGGAAATCTGATTTTGTCTCT
 
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JMSF045G08-           TTGCGTCTGAGTTTACCAGAGGTGATGATGCAAAGAACAGACAACTCAAGACTTCTGCTA
rJMFF041P05+                  GAGTTTACCAGAGGTGATGATGCAAAGAACAGACAACTCAAGACTTCTGCTA
                      ____________________________________________________________
consensus             TTGCGTCTGAGTTTACCAGAGGTGATGATGCAAAGAACAGACAACTCAAGACTTCTGCTA
 
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JMSF045G08-           AGAACTTTGAGAAGCCATTATATTCTTGTATCTTACCATCCAGGATAACATGCATTCAAT
rJMFF041P05+          AGAACTTTGAGAAGCCATTATATTCTTGTATCTTACCATCCAGGATAACATTCATTCAAT
                      ____________________________________________________________
consensus             AGAACTTTGAGAAGCCATTATATTCTTGTATCTTACCATCCAGGATAACATTCATTCAAT
 
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JMSF045G08-           TATTTGCTTCAATTCATTTCTTAAACTTGTCAGGGATATGATGATATGTCAATCTTCAAT
rJMFF001H10+                       TCATTTCTTAACCTTGTCAGGGATATGNTGATATGTCAATCTTCAAT
rJMFF041P05+          TATTTGCTTCAATTCATTTCTTAAACTTGTCAGGGATATGATGATATGTCAATCTTCAAT
                      ____________________________________________________________
consensus             TATTTGCTTCAATTCATTTCTTAAACTTGTCAGGGATATGATGATATGTCAATCTTCAAT
 
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JMSF045G08-           TCATTTCTGTGGAGCCACCAGCGAGAGCAAGACCACTTTTTTCCATCCCAGTGTCACACT
rJMFF001H10+          TCATTTCTGTGGAGCCACCAGTGAGAGCAAGACCACTTTTTTCCATCCCAGTGTCACACT
rJMFF041P05+          TCATTTCTGTGGAGCCACCAGTGAGAGCAAGACCACTTTTTTCCATCCCAGTGTCACACT
                      ____________________________________________________________
consensus             TCATTTCTGTGGAGCCACCAGTGAGAGCAAGACCACTTTTTTCCATCCCAGTGTCACACT
 
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JMSF045G08-           CTATCTGGGCTGTCTGTCTGTCTATGTTTTGTTTTAAGGTTTTCCAGTGATTATTGTTTT
rJMFF001H10+          CTATGTGGGCTGTCTGTCTGTCTATGTTTTGTTTTAAGGTTTTCCAGTGATTATTGTTTT
rJMFF041P05+          CTATCTGGGCTGTCTGTCTGTCTATGTTTTGTTTTAAGGTTTTCCAGTGATTATTGTTTT
                      ____________________________________________________________
consensus             CTATCTGGGCTGTCTGTCTGTCTATGTTTTGTTTTAAGGTTTTCCAGTGATTATTGTTTT
 
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JMSF045G08-           TTTTACTGACTTGTCACAAATGAGTGACACTTGAGTAATTTCATGTTTACTGTATGTTTA
rJMFF001H10+          TTTTACTGACTTGTCACAAATGAGTGACACTTGAGTAATTTCATGTTTACTGTATGTTTA
rJMFF041P05+          TTTTACTGACTTGTCACAAATGAGTGACACTTGAGTAATTTCATGTTTACTGTATGTTTA
                      ____________________________________________________________
consensus             TTTTACTGACTTGTCACAAATGAGTGACACTTGAGTAATTTCATGTTTACTGTATGTTTA
 
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JMSF045G08-           GCTAGGCATGAAGCTGAGCTCCAAGAAGCTGCTCCTAATAATTTCCCACTTTCTTGA   
rJMFF001H10+          GCTAGGCATGAAGCTGAGCTCCAAGAAGCTGCTCCTAATAATTTCCCACTTTCTTGATGT
rJMFF041P05+          GCTAGGCATGAAGCTGAGCTCCAAGAAGCTGCTCCTAATAATTTCCCACTTTCTTGATGT
                      ____________________________________________________________
consensus             GCTAGGCATGAAGCTGAGCTCCAAGAAGCTGCTCCTAATAATTTCCCACTTTCTTGATGT
 
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rJMFF001H10+          TTCTCTGTATGTTTTCCGAGCGAAAAAAAACGCGCACTAAGAAAAA              
rJMFF041P05+          TTCTCTGTATGTTTTCCGAGCCTAAAAAAACGCGCACTAAGAAAAATTAATTTACTATGC
                      ____________________________________________________________
consensus             TTCTCTGTATGTTTTCCGAGCGTAAAAAAACGCGCACTAAGAAAAATTAATTTACTATGC