Contig 001179:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009E24Sequence588004917 (10)ref|XP_011099906.1|8e-19PREDICTED: probable inactive receptor kinase At1g48480 [Sesamum indicum]541001179 (5)ref|XP_009592532.1|8e-31PREDICTED: probable inactive receptor kinase RLK902 [Nicotiana tomentosiformis]
JMFF041D21Sequence631004917 (10)ref|XP_009592532.1|4e-29PREDICTED: probable inactive receptor kinase RLK902 [Nicotiana tomentosiformis]633001179 (5)ref|XP_009592532.1|2e-59PREDICTED: probable inactive receptor kinase RLK902 [Nicotiana tomentosiformis]
JMSF002C03Sequence339004917 (10)508001179 (5)ref|XP_007032119.1|4e-28Receptor-like kinase 1 [Theobroma cacao] gb|EOY03045.1| Receptor-like kinase 1 [
JMSF006M12Sequence304004917 (10)390001179 (5)ref|XP_009592532.1|4e-55PREDICTED: probable inactive receptor kinase RLK902 [Nicotiana tomentosiformis]
JMSF008J05Sequence358004917 (10)687001179 (5)ref|XP_009592532.1|1e-97PREDICTED: probable inactive receptor kinase RLK902 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF008J05+ AACTGGGAAACAAGAACCTCA
                      ____________________________________________________________
consensus AACTGGGAAACAAGAACCTCA
 
. : . : . : . : . : . :
rJMSF008J05+ ATAGCCCTAGGGGCTGCCCGGGGGATNTCCCACCTCCACTCACAAGGCCAATCCATTTCC
                      ____________________________________________________________
consensus ATAGCCCTAGGGGCTGCCCGGGGGATNTCCCACCTCCACTCACAAGGCCAATCCATTTCC
 
. : . : . : . : . : . :
rJMSF008J05+ CACGGCAACATTAAATCATCAAACNTTNTCCTAACCAAATCCTATGATGCCCGTGTNTCC
                      ____________________________________________________________
consensus CACGGCAACATTAAATCATCAAACNTTNTCCTAACCAAATCCTATGATGCCCGTGTNTCC
 
. : . : . : . : . : . :
rJMSF008J05+ GATTTCGGTNTTGCCCAGCTTGTTGGCCCGTCCTNGACTCCAACGCGGGTGGACGGTTAC
                      ____________________________________________________________
consensus GATTTCGGTNTTGCCCAGCTTGTTGGCCCGTCCTNGACTCCAACGCGGGTGGACGGTTAC
 
. : . : . : . : . : . :
rJMSF008J05+ CGGGCNCCCGAGGTAACCGATCCTNGGAAGGTGTCCCAGAAAGCGGATGTTTATAGTTTC
rJMSF006M12+ TGTTTATAGTTTC
rJMFF041D21+ GGAAGGTGTCCCAGAAAGCGGATGTTTATAGTTTC
                      ____________________________________________________________
consensus CGGGCNCCCGAGGTAACCGATCCTNGGAAGGTGTCCCAGAAAGCGGATGTTTATAGTTTC
 
. : . : . : . : . : . :
rJMSF008J05+ GGAGTTNTGCTGTTGGAATTGCTGACCGGGAAAGCACCCACCCNCGCCCTATNTAACGAG
rJMSF002C03+ TAACGAG
rJMFF009E24+ CGCCCTATTTAACGAG
rJMSF006M12+ GGAGTTCTGCTGTTGGAATTGCTGACCGGGAAAGCACCCACCCACGCCCTATCTAACGAG
rJMFF041D21+ GGAGTTCTGCTGTTGGAATTGCTGACCGGGAAAGCACCCACCCACGCCCTATCTAACGAG
                      ____________________________________________________________
consensus GGAGTTCTGCTGTTGGAATTGCTGACCGGGAAAGCACCCACCCACGCCCTATCTAACGAG
 
. : . : . : . : . : . :
rJMSF008J05+ GAGGGCGTGGACCTGCCGAGGTGGGTGCNGTCGGTGGTCCGGGAGGAGTGGACGTCGGAG
rJMSF002C03+ GAGGGCGTGGACCNGCCGAGGTGGGNGCNGTCGGTGGTCCGGGAGGAGTGGACGTCGGAG
rJMFF009E24+ GAGGGCGTGGACCTGCCGAGGTGGGTGCNGTCGGTGGTCCGGGAGGAGTGGACGTCGGAG
rJMSF006M12+ GAGGGCGTGGACCTGCCGAGGTGGGTGCAGTCGGTGGTCCGGGAGGAGTGGACGTCGGAG
rJMFF041D21+ GAGGGCGTGGACCTGCCGAGGTGGGTGCAGTCGGTGGTCCGGGAGGAGTGGACGTCGGAG
                      ____________________________________________________________
consensus GAGGGCGTGGACCTGCCGAGGTGGGTGCAGTCGGTGGTCCGGGAGGAGTGGACGTCGGAG
 
. : . : . : . : . : . :
rJMSF008J05+ GTTTTCGATNTGGAACTGCTGAGGTACCAGAATGTTGTTGAAGAGGATATGGTTCAGCTG
rJMSF002C03+ GTTTTCGATNTGGAACTGCTGAGGTACCNGAATGTTGTTGAAGAGGATATGGTTCAGCTG
rJMFF009E24+ GTTTTNGATNTGGAACTGCTGAGGTNCCAGAATGTTGTTGAAGAGGATATGGTTCAGCTG
rJMSF006M12+ GTTTTCGATCTGGAACTGCTGAGGTACCAGAATGTTGTTGAAGAGGATATGGTTCAGCTG
rJMFF041D21+ GTTTTCGATCTGGAACTGCTGAGGTACCAGAATGTTGTTGAAGAGGATATGGTTCAGCTG
                      ____________________________________________________________
consensus GTTTTCGATCTGGAACTGCTGAGGTACCAGAATGTTGTTGAAGAGGATATGGTTCAGCTG
 
. : . : . : . : . : . :
rJMSF008J05+ TTGCAGCTTGCTGTCAACTGTACTGCCCAGTACCCCGACAAGCGCCCTTCAATGGCGGAA
rJMSF002C03+ TTGCAGCTTGCTGTCAACTGTNCTGCCCNGTACCCCGNCAAGCGCCCTTCAATGGCGGAA
rJMFF009E24+ TTGCAGCTTGCTGTCAACTGTNCTGCCCAGTNCCCCGACAAGCGCCCTTCAATGGCGGAA
rJMSF006M12+ TTGCAGCTTGCTGTCAACTGTACTGCCCAGTACCCCGACAAGCGCCCTTCAATGGCGGAA
rJMFF041D21+ TTGCAGCTTGCTGTCAACTGTACTGCCCAGTACCCCGACAAGCGCCCTTCAATGGCGGAA
                      ____________________________________________________________
consensus TTGCAGCTTGCTGTCAACTGTACTGCCCAGTACCCCGACAAGCGCCCTTCAATGGCGGAA
 
. : . : . : . : . : . :
rJMSF008J05+ ATTNCCGCCAGAATTGAAGACCTATGTNGTCCTGGTTTCCNGGACAACAACATAGTTGAC
rJMSF002C03+ ATTACCGCCNGAATTGAAGACCTANGTNGTCCTGGNTTCCNGGNCAACAACATAGTTGNC
rJMFF009E24+ ATTNCCNCCAGAATTGAAGACCTATGTNGTCCTGGTTTCCAGGNCAACAACATAGTTGNC
rJMSF006M12+ ATTACCGCCAGAATTGAAGACCTATGTCGTCCTGGTTTCCAGGACAACAACATAGTTGAC
rJMFF041D21+ ATTACCGCCAGAATTGAAGACCTATGTCGTCCTGGTTTCCAGGACAACAACATAGTTGAC
                      ____________________________________________________________
consensus ATTACCGCCAGAATTGAAGACCTATGTCGTCCTGGTTTCCAGGACAACAACATAGTTGAC
 
. : . : . : . : . : . :
rJMSF008J05+ AACCCNGAAGAGTAAAAGGTTGCGAAATTAAAACGTATGATTCAAGTTCCNCTTTTTTTT
rJMSF002C03+ AACCCNGAAGAGTAAAAGGTTGNGAAATTAAAACGTATGATTCAAGNTCCNC-TTTTTTT
rJMFF009E24+ AACCCAGAAGAGTAAAAGGTTGNGAAATTAAAACGTATGATTCAAGTTCCNC-TTTTTTT
rJMSF006M12+ AACCCAGAAGAGTAAAAGGTTGCGAAATTAAAACGTATGATTCAAGTTCCAC-TTTTTTT
rJMFF041D21+ AACCCAGAAGAGTAAAAGGTTGCGAAATTAAAACGTATGATTCAAGTTCCAC-TTTTTTT
                      ____________________________________________________________
consensus AACCCAGAAGAGTAAAAGGTTGCGAAATTAAAACGTATGATTCAAGTTCCAC-TTTTTTT
 
. : . : . : . : . : . :
rJMSF008J05+ TAAAAAAAACATTTCCTTTTGTTTTCTGGTTTGAATTCTTCGATCATTTGTCAATTTTAT
rJMSF002C03+ T--AAAAAACNTTTCCTTTTGTTTTNTGGTTTGAATTNTTCGATCNTTTGTCAATTTTAT
rJMFF009E24+ TAAAAAAAACATTTCCTTTTGTTTTNTGGTTTGAATTNTTCGATCATTTGTCAATTTTAT
rJMSF006M12+ TAAAAAAAA
rJMFF041D21+ TAAAAAAAACATTTCCTTTTGTTTTCTGGTTTGAATTCTTCGATCATTTGTCAATTTTAT
                      ____________________________________________________________
consensus TAAAAAAAACATTTCCTTTTGTTTTCTGGTTTGAATTCTTCGATCATTTGTCAATTTTAT
 
. : . : . : . : . : . :
rJMSF008J05+ AAGC
rJMSF002C03+ AAGCNTCATCTTTCTCTTTTTTTTTTTCCGCGGCTATTGATCAACAAATTAAGGTTCTTG
rJMFF009E24+ AAGCATCATCTTTNTNTTTTTTTTTTTCCGCGGCTATTGATCAACAAATTAAGGTTCTTG
rJMFF041D21+ AAGCATCATCTTT---CTCTTTTTTTTCCGCGGCTATTGATCAACAAATTAAGGTTCTTG
                      ____________________________________________________________
consensus AAGCATCATCTTTCTCTTTTTTTTTTTCCGCGGCTATTGATCAACAAATTAAGGTTCTTG
 
. : . : . : . : . : . :
rJMSF002C03+ GAGATCTGTAGTTTTTAGTTTTTGGTGTATGTGTGGAATGTAAAATATAGTATTGTCGTC
rJMFF009E24+ GAGATCTGTAGTTTTTAGTTTTTGGTGTATGTGTGGAATGTAAAATATAGTATTGTCGTC
rJMFF041D21+ GAGATCTGTAGTTTTTAGTTTTTGGTGTATGTGTGGAATGTAAAATATAGTATTGTCGTC
                      ____________________________________________________________
consensus GAGATCTGTAGTTTTTAGTTTTTGGTGTATGTGTGGAATGTAAAATATAGTATTGTCGTC
 
. : . : . : . : . : . :
rJMSF002C03+ GATCGAGCTGTTCTTGTTGG
rJMFF009E24+ GATCGAGCTGTTCTTGTTGGGCACATGGCGGCC
rJMFF041D21+ GATCGAGCTGTTCTTGTTGGGCACATGGCGGCCCTTGTAATTACATATTCTTTCTTTCGT
                      ____________________________________________________________
consensus GATCGAGCTGTTCTTGTTGGGCACATGGCGGCCCTTGTAATTACATATTCTTTCTTTCGT