Contig 001179:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009E24Sequence588004917 (10)ref|XP_011099906.1|8e-19PREDICTED: probable inactive receptor kinase At1g48480 [Sesamum indicum]541001179 (5)ref|XP_009592532.1|8e-31PREDICTED: probable inactive receptor kinase RLK902 [Nicotiana tomentosiformis]
JMFF041D21Sequence631004917 (10)ref|XP_009592532.1|4e-29PREDICTED: probable inactive receptor kinase RLK902 [Nicotiana tomentosiformis]633001179 (5)ref|XP_009592532.1|2e-59PREDICTED: probable inactive receptor kinase RLK902 [Nicotiana tomentosiformis]
JMSF002C03Sequence339004917 (10)508001179 (5)ref|XP_007032119.1|4e-28Receptor-like kinase 1 [Theobroma cacao] gb|EOY03045.1| Receptor-like kinase 1 [
JMSF006M12Sequence304004917 (10)390001179 (5)ref|XP_009592532.1|4e-55PREDICTED: probable inactive receptor kinase RLK902 [Nicotiana tomentosiformis]
JMSF008J05Sequence358004917 (10)687001179 (5)ref|XP_009592532.1|1e-97PREDICTED: probable inactive receptor kinase RLK902 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF008J05+                                                 AACTGGGAAACAAGAACCTCA
                      ____________________________________________________________
consensus                                                    AACTGGGAAACAAGAACCTCA
 
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rJMSF008J05+          ATAGCCCTAGGGGCTGCCCGGGGGATNTCCCACCTCCACTCACAAGGCCAATCCATTTCC
                      ____________________________________________________________
consensus             ATAGCCCTAGGGGCTGCCCGGGGGATNTCCCACCTCCACTCACAAGGCCAATCCATTTCC
 
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rJMSF008J05+          CACGGCAACATTAAATCATCAAACNTTNTCCTAACCAAATCCTATGATGCCCGTGTNTCC
                      ____________________________________________________________
consensus             CACGGCAACATTAAATCATCAAACNTTNTCCTAACCAAATCCTATGATGCCCGTGTNTCC
 
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rJMSF008J05+          GATTTCGGTNTTGCCCAGCTTGTTGGCCCGTCCTNGACTCCAACGCGGGTGGACGGTTAC
                      ____________________________________________________________
consensus             GATTTCGGTNTTGCCCAGCTTGTTGGCCCGTCCTNGACTCCAACGCGGGTGGACGGTTAC
 
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rJMSF008J05+          CGGGCNCCCGAGGTAACCGATCCTNGGAAGGTGTCCCAGAAAGCGGATGTTTATAGTTTC
rJMSF006M12+                                                         TGTTTATAGTTTC
rJMFF041D21+                                   GGAAGGTGTCCCAGAAAGCGGATGTTTATAGTTTC
                      ____________________________________________________________
consensus             CGGGCNCCCGAGGTAACCGATCCTNGGAAGGTGTCCCAGAAAGCGGATGTTTATAGTTTC
 
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rJMSF008J05+          GGAGTTNTGCTGTTGGAATTGCTGACCGGGAAAGCACCCACCCNCGCCCTATNTAACGAG
rJMSF002C03+                                                               TAACGAG
rJMFF009E24+                                                      CGCCCTATTTAACGAG
rJMSF006M12+          GGAGTTCTGCTGTTGGAATTGCTGACCGGGAAAGCACCCACCCACGCCCTATCTAACGAG
rJMFF041D21+          GGAGTTCTGCTGTTGGAATTGCTGACCGGGAAAGCACCCACCCACGCCCTATCTAACGAG
                      ____________________________________________________________
consensus             GGAGTTCTGCTGTTGGAATTGCTGACCGGGAAAGCACCCACCCACGCCCTATCTAACGAG
 
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rJMSF008J05+          GAGGGCGTGGACCTGCCGAGGTGGGTGCNGTCGGTGGTCCGGGAGGAGTGGACGTCGGAG
rJMSF002C03+          GAGGGCGTGGACCNGCCGAGGTGGGNGCNGTCGGTGGTCCGGGAGGAGTGGACGTCGGAG
rJMFF009E24+          GAGGGCGTGGACCTGCCGAGGTGGGTGCNGTCGGTGGTCCGGGAGGAGTGGACGTCGGAG
rJMSF006M12+          GAGGGCGTGGACCTGCCGAGGTGGGTGCAGTCGGTGGTCCGGGAGGAGTGGACGTCGGAG
rJMFF041D21+          GAGGGCGTGGACCTGCCGAGGTGGGTGCAGTCGGTGGTCCGGGAGGAGTGGACGTCGGAG
                      ____________________________________________________________
consensus             GAGGGCGTGGACCTGCCGAGGTGGGTGCAGTCGGTGGTCCGGGAGGAGTGGACGTCGGAG
 
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rJMSF008J05+          GTTTTCGATNTGGAACTGCTGAGGTACCAGAATGTTGTTGAAGAGGATATGGTTCAGCTG
rJMSF002C03+          GTTTTCGATNTGGAACTGCTGAGGTACCNGAATGTTGTTGAAGAGGATATGGTTCAGCTG
rJMFF009E24+          GTTTTNGATNTGGAACTGCTGAGGTNCCAGAATGTTGTTGAAGAGGATATGGTTCAGCTG
rJMSF006M12+          GTTTTCGATCTGGAACTGCTGAGGTACCAGAATGTTGTTGAAGAGGATATGGTTCAGCTG
rJMFF041D21+          GTTTTCGATCTGGAACTGCTGAGGTACCAGAATGTTGTTGAAGAGGATATGGTTCAGCTG
                      ____________________________________________________________
consensus             GTTTTCGATCTGGAACTGCTGAGGTACCAGAATGTTGTTGAAGAGGATATGGTTCAGCTG
 
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rJMSF008J05+          TTGCAGCTTGCTGTCAACTGTACTGCCCAGTACCCCGACAAGCGCCCTTCAATGGCGGAA
rJMSF002C03+          TTGCAGCTTGCTGTCAACTGTNCTGCCCNGTACCCCGNCAAGCGCCCTTCAATGGCGGAA
rJMFF009E24+          TTGCAGCTTGCTGTCAACTGTNCTGCCCAGTNCCCCGACAAGCGCCCTTCAATGGCGGAA
rJMSF006M12+          TTGCAGCTTGCTGTCAACTGTACTGCCCAGTACCCCGACAAGCGCCCTTCAATGGCGGAA
rJMFF041D21+          TTGCAGCTTGCTGTCAACTGTACTGCCCAGTACCCCGACAAGCGCCCTTCAATGGCGGAA
                      ____________________________________________________________
consensus             TTGCAGCTTGCTGTCAACTGTACTGCCCAGTACCCCGACAAGCGCCCTTCAATGGCGGAA
 
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rJMSF008J05+          ATTNCCGCCAGAATTGAAGACCTATGTNGTCCTGGTTTCCNGGACAACAACATAGTTGAC
rJMSF002C03+          ATTACCGCCNGAATTGAAGACCTANGTNGTCCTGGNTTCCNGGNCAACAACATAGTTGNC
rJMFF009E24+          ATTNCCNCCAGAATTGAAGACCTATGTNGTCCTGGTTTCCAGGNCAACAACATAGTTGNC
rJMSF006M12+          ATTACCGCCAGAATTGAAGACCTATGTCGTCCTGGTTTCCAGGACAACAACATAGTTGAC
rJMFF041D21+          ATTACCGCCAGAATTGAAGACCTATGTCGTCCTGGTTTCCAGGACAACAACATAGTTGAC
                      ____________________________________________________________
consensus             ATTACCGCCAGAATTGAAGACCTATGTCGTCCTGGTTTCCAGGACAACAACATAGTTGAC
 
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rJMSF008J05+          AACCCNGAAGAGTAAAAGGTTGCGAAATTAAAACGTATGATTCAAGTTCCNCTTTTTTTT
rJMSF002C03+          AACCCNGAAGAGTAAAAGGTTGNGAAATTAAAACGTATGATTCAAGNTCCNC-TTTTTTT
rJMFF009E24+          AACCCAGAAGAGTAAAAGGTTGNGAAATTAAAACGTATGATTCAAGTTCCNC-TTTTTTT
rJMSF006M12+          AACCCAGAAGAGTAAAAGGTTGCGAAATTAAAACGTATGATTCAAGTTCCAC-TTTTTTT
rJMFF041D21+          AACCCAGAAGAGTAAAAGGTTGCGAAATTAAAACGTATGATTCAAGTTCCAC-TTTTTTT
                      ____________________________________________________________
consensus             AACCCAGAAGAGTAAAAGGTTGCGAAATTAAAACGTATGATTCAAGTTCCAC-TTTTTTT
 
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rJMSF008J05+          TAAAAAAAACATTTCCTTTTGTTTTCTGGTTTGAATTCTTCGATCATTTGTCAATTTTAT
rJMSF002C03+          T--AAAAAACNTTTCCTTTTGTTTTNTGGTTTGAATTNTTCGATCNTTTGTCAATTTTAT
rJMFF009E24+          TAAAAAAAACATTTCCTTTTGTTTTNTGGTTTGAATTNTTCGATCATTTGTCAATTTTAT
rJMSF006M12+          TAAAAAAAA                                                   
rJMFF041D21+          TAAAAAAAACATTTCCTTTTGTTTTCTGGTTTGAATTCTTCGATCATTTGTCAATTTTAT
                      ____________________________________________________________
consensus             TAAAAAAAACATTTCCTTTTGTTTTCTGGTTTGAATTCTTCGATCATTTGTCAATTTTAT
 
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rJMSF008J05+          AAGC                                                        
rJMSF002C03+          AAGCNTCATCTTTCTCTTTTTTTTTTTCCGCGGCTATTGATCAACAAATTAAGGTTCTTG
rJMFF009E24+          AAGCATCATCTTTNTNTTTTTTTTTTTCCGCGGCTATTGATCAACAAATTAAGGTTCTTG
rJMFF041D21+          AAGCATCATCTTT---CTCTTTTTTTTCCGCGGCTATTGATCAACAAATTAAGGTTCTTG
                      ____________________________________________________________
consensus             AAGCATCATCTTTCTCTTTTTTTTTTTCCGCGGCTATTGATCAACAAATTAAGGTTCTTG
 
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rJMSF002C03+          GAGATCTGTAGTTTTTAGTTTTTGGTGTATGTGTGGAATGTAAAATATAGTATTGTCGTC
rJMFF009E24+          GAGATCTGTAGTTTTTAGTTTTTGGTGTATGTGTGGAATGTAAAATATAGTATTGTCGTC
rJMFF041D21+          GAGATCTGTAGTTTTTAGTTTTTGGTGTATGTGTGGAATGTAAAATATAGTATTGTCGTC
                      ____________________________________________________________
consensus             GAGATCTGTAGTTTTTAGTTTTTGGTGTATGTGTGGAATGTAAAATATAGTATTGTCGTC
 
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rJMSF002C03+          GATCGAGCTGTTCTTGTTGG                                        
rJMFF009E24+          GATCGAGCTGTTCTTGTTGGGCACATGGCGGCC                           
rJMFF041D21+          GATCGAGCTGTTCTTGTTGGGCACATGGCGGCCCTTGTAATTACATATTCTTTCTTTCGT
                      ____________________________________________________________
consensus             GATCGAGCTGTTCTTGTTGGGCACATGGCGGCCCTTGTAATTACATATTCTTTCTTTCGT