Contig 001169:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013P20Sequence551000129 (3)ref|XP_009763272.1|94.0PREDICTED: uncharacterized protein LOC104215218 [Nicotiana sylvestris]623001169 (4)ref|XP_010036888.1|6e-05PREDICTED: uncharacterized protein LOC104425788 isoform X1 [Eucalyptus grandis]
JMFF024L05Sequence504000129 (3)ref|XP_009763272.1|94.4PREDICTED: uncharacterized protein LOC104215218 [Nicotiana sylvestris]663001169 (4)ref|XP_010036888.1|8e-05PREDICTED: uncharacterized protein LOC104425788 isoform X1 [Eucalyptus grandis]
JMFF038O10Sequence563000981 (34)gb|ABO33631.1|1e-96monodehydroascorbate reductase [Ipomoea batatas]537001169 (4)
JMFS013G09Sequence526001169 (4)

Alignment

This contig is upended


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rJMFF024L05+                                      CCATTCTCGCCGACGNTAGAAGCCATAGCGCC
                      ____________________________________________________________
consensus                                         CCATTCTCGCCGACGNTAGAAGCCATAGCGCC
 
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rJMFF024L05+          ACCCCCGCTTATCCCCACCACCACCCCCGTCGCCCCTCTCCTCCTCCTCGGCCCGCAAGA
rJMFF013P20+                    ATCCCCACCACCACCCCCGTCGCCCCTCTCCTCCTCCTCGGCCCGCAAGA
                      ____________________________________________________________
consensus             ACCCCCGCTTATCCCCACCACCACCCCCGTCGCCCCTCTCCTCCTCCTCGGCCCGCAAGA
 
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JMFS013G09-                                                    GCCCCGGTGAGGATTGAAG
rJMFF024L05+          ACGGGGGAGGAGGATGCGGGATGAAGTTCGGGCACAAGCCGGCCCCGGTGAGGATTGAAG
rJMFF013P20+          ACGGGGGAGGAGGATGCGGGATGAAGTTCGGGCACAAGCCGGCCCCGGTGAGGATTGAAG
                      ____________________________________________________________
consensus             ACGGGGGAGGAGGATGCGGGATGAAGTTCGGGCACAAGCCGGCCCCGGTGAGGATTGAAG
 
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JMFS013G09-           GCTTCAGCTGTCGTCGGAACTGCAGCATATCCGCTGTAGCTTAGGTACACTTCCGGGAAG
rJMFF024L05+          GCTTCAGCTGTCGTCGGAACTGCAGCATATCCGCTGTAGCTTAGGTACACTTCCGGGAAG
rJMFF013P20+          GCTTCAGCTGTCGTCGGAACTGCAGCATATCCGCTGTAGCTTAGGTACACTTCCGGGAAG
                      ____________________________________________________________
consensus             GCTTCAGCTGTCGTCGGAACTGCAGCATATCCGCTGTAGCTTAGGTACACTTCCGGGAAG
 
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JMFS013G09-           ATCTGCAGAGGTTTGGGGCATCATCAAGGAGAGATTTTCGGGTGAGAATACCCAAAACTA
rJMFF024L05+          ATCTGCAGAGGTTTGGGGCATCATCAAGGAGAGATTTTCGGGTGAGAATACCCAAAACTA
rJMFF013P20+          ATCTGCAGAGGTTTGGGGCATCATCAAGGAGAGATTTTCGGGTGAGAATACCCAAAACTA
rJMFF038O10+                             ATCATCAAGGAGAGATTTTCGGGNGAGAATACCCAANNCTA
                      ____________________________________________________________
consensus             ATCTGCAGAGGTTTGGGGCATCATCAAGGAGAGATTTTCGGGTGAGAATACCCAAAACTA
 
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JMFS013G09-           AACCAATTTGTTTAGCTGTGTACATATAGAGTGAGAAGAGAGTCTTTGAAAAAGCATCTT
rJMFF024L05+          AACCAATTTGTTTAGCTGTGTACATATAGAGTGAGAAGAGAGTCTTTGAAAAAGCATCTT
rJMFF013P20+          AACCAATTTGTTTAGCTGTGTACATATAGAGTGAGAAGAGAGTCTTTGAAAAAGCATCTT
rJMFF038O10+          AACCAATTTGTTTAGCTGTGTACATATAGAGTGAGAAGAGAGTCTTTGAAAAAGCATCTT
                      ____________________________________________________________
consensus             AACCAATTTGTTTAGCTGTGTACATATAGAGTGAGAAGAGAGTCTTTGAAAAAGCATCTT
 
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JMFS013G09-           AACAATTTGCTGATTATGAGTTTTTCCTTATTATTTCCCATTAAGTCAGTCGGATGTGCA
rJMFF024L05+          AACAATTTGCTGATTATGAGTTTTTCCTTATTATTTCCCATTAAGTCAGTCGGATGTGCA
rJMFF013P20+          AACAATTTGCTGATTATGAGTTTTTCCTTATTATTTCCCATTAAGTCAGTCGGATGTGCA
rJMFF038O10+          AACAATTTGCTGATTATGAGTTTTTCCTTATTATTTCCCATTAAGTCAGTCGGATGTGCA
                      ____________________________________________________________
consensus             AACAATTTGCTGATTATGAGTTTTTCCTTATTATTTCCCATTAAGTCAGTCGGATGTGCA
 
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JMFS013G09-           TATGTAATGAGATTATGAGTTGAGGGGAAGTTAATTCAAAACAATAAACAGCTCCAAAGA
rJMFF024L05+          TATGTAATGAGATTATGAGTTGAGGGGAAGTTAATTCAAAACAATAAACAGCTCCAAAGA
rJMFF013P20+          TATGTAATGAGATTATGAGTTGAGGGGAAGTTAATTCAAAACAATAAACAGCTCCAAAGA
rJMFF038O10+          TATGTAATGAGATTATGAGTTGAGGGGAAGTTAATTCAAAACAATAAACAGCTCCAAAGA
                      ____________________________________________________________
consensus             TATGTAATGAGATTATGAGTTGAGGGGAAGTTAATTCAAAACAATAAACAGCTCCAAAGA
 
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JMFS013G09-           GGAAGAAAGGGATATGATATGGGTAAATCCTCCCTTCCCTTTTCACCTCTGAGCTCTGTT
rJMFF024L05+          GGAAGAAAGGGATATGATATGGGTAAATCCTCCCTTCCCTTTTCACCTCTGAGCTCTGTT
rJMFF013P20+          GGAAGAAAGGGATATGATATGGGTAAATCCTCCCTTCCCTTTTCACCTCTGAGCTCTGTT
rJMFF038O10+          GGAAGAAAGGGATATGATATGGGTAAATCCTCCCTTCCCTTTTCACCTCTGAGCTCTGTT
                      ____________________________________________________________
consensus             GGAAGAAAGGGATATGATATGGGTAAATCCTCCCTTCCCTTTTCACCTCTGAGCTCTGTT
 
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JMFS013G09-           AAGTTAGGTTTTTACTACTACTTTTTACCACAGGCCATGATATGAGGTTGAGTGTATCTT
rJMFF024L05+          AAGTTAGGTTTTTACTACTACTTTTTACCACAGGCCATGATATGAGGTTGAGTGTATCTT
rJMFF013P20+          AAGTTAGGTTTTTACTACTACTTTTTACCACAGGCCATGATATGAGGTTGAGTGTATCTT
rJMFF038O10+          AAGTTAGGTTTTTACTACTACTTTTTACGACAGGCCATGATATGAGGTTGAGTGTATCTT
                      ____________________________________________________________
consensus             AAGTTAGGTTTTTACTACTACTTTTTACCACAGGCCATGATATGAGGTTGAGTGTATCTT
 
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JMFS013G09-           AAAGTAAAGAGACTTGGGAGACCACTTTCATCTTGTAACATTGTTACTCTTC-TTGCCCT
rJMFF024L05+          AAAGTAAAGAGACTTGGGAGACCACTTTCATCTTGTAACATTGTTACTCTTC-TTGCCCT
rJMFF013P20+          AAAGTAAAGAGACTTGGGAGACCACTTTCATCTTGTAACATTGTTACTCTTCTTTGCCCT
rJMFF038O10+          AAAGTAAAGAGACTTGGGAGATCACTTTCATCTTGTAACATTGTTACTCTTC-TTGCCCT
                      ____________________________________________________________
consensus             AAAGTAAAGAGACTTGGGAGACCACTTTCATCTTGTAACATTGTTACTCTTC-TTGCCCT
 
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JMFS013G09-           TCACTGTAATTGTAATT                                           
rJMFF024L05+          TCACTGTAATTGTAATT                                           
rJMFF013P20+          TCACTGTAATTGTAATT                                           
rJMFF038O10+          TCACTGTAATTGTAATTTGAAGGAGAGGAGACAATGGTCTTTTCATTTTTCGAGGTCTTA
                      ____________________________________________________________
consensus             TCACTGTAATTGTAATTTGAAGGAGAGGAGACAATGGTCTTTTCATTTTTCGAGGTCTTA
 
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rJMFF038O10+          TTATATACATATATTTATTTATTTTCTCCCAATTGTTGTGAATATTATTTATCTTGTATA
                      ____________________________________________________________
consensus             TTATATACATATATTTATTTATTTTCTCCCAATTGTTGTGAATATTATTTATCTTGTATA