Contig 001165:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012H09Sequence449004503 (10)786001165 (6)ref|XP_009757722.1|7e-56PREDICTED: phosphatidylinositol 4-kinase gamma 7-like isoform X2 [Nicotiana syl
JMFF023O16Sequence406004503 (10)751001165 (6)ref|XP_010319484.1|5e-43PREDICTED: phosphatidylinositol 4-kinase gamma 7-like isoform X2 [Solanum lycop
JMFF024O19Sequence424004503 (10)746001165 (6)ref|XP_010319484.1|5e-43PREDICTED: phosphatidylinositol 4-kinase gamma 7-like isoform X2 [Solanum lycop
JMFF038G19Sequence444004503 (10)669001165 (6)gb|AFK40506.1|4e-23unknown [Lotus japonicus]
JMSF042O23Sequence722004503 (10)ref|XP_010091640.1|1e-58putative phosphatidylinositol 4-kinase type 2-beta [Morus notabilis] gb|EXB44906710001165 (6)ref|XP_009757720.1|4e-51PREDICTED: phosphatidylinositol 4-kinase gamma 7-like isoform X1 [Nicotiana syl
JMSF047J17Sequence238004503 (10)766001165 (6)ref|XP_009757722.1|4e-56PREDICTED: phosphatidylinositol 4-kinase gamma 7-like isoform X2 [Nicotiana syl

Alignment

This contig is upended


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rJMSF047J17+                                                      GTGTGAAGATTATAGG
rJMFF012H09+                                                         TGAAGATTATAGG
                      ____________________________________________________________
consensus                                                         GTGTGAAGATTATAGG
 
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rJMSF047J17+          TACGAGTGTATGCCAAAAATGGCCTTTGCGGAGTTCATGACCAGGAATGCATTTCAGTTT
rJMSF042O23+                                            TCATGACCAGGAATGCATTTCAGTTT
rJMFF012H09+          TACGAGTGTATGCCAAAAATGGCCTCTGCGGAGTTCATGACCAGGAATGCATTTCAGTTT
                      ____________________________________________________________
consensus             TACGAGTGTATGCCAAAAATGGCCTTTGCGGAGTTCATGACCAGGAATGCATTTCAGTTT
 
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rJMSF047J17+          GCATTTGGAGGGAATGGCCAATGGCCGCTTTCTAAACTTGATGAGAGTACTCAAGAGGAA
rJMSF042O23+          GCATTTGGAGGGAATGGCCAATGGCCGCTTTCTAAACTTGATGAGAGTACTCAAGAGGAA
rJMFF012H09+          GCATTTGGAGGGAATGGCCAATGGCCGCTTTCTAAACTTGATGAGAGTACTCAAGAGGAA
rJMFF024O19+                                             ACTTGATGAGAGTACTCAAGAGGAA
rJMFF023O16+                                              CTTGATGAGAGTACTCAAGAGGAA
                      ____________________________________________________________
consensus             GCATTTGGAGGGAATGGCCAATGGCCGCTTTCTAAACTTGATGAGAGTACTCAAGAGGAA
 
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rJMSF047J17+          GAGGAAAGTGAAGAGGAGGCAGAGATCTCCACTGGTGGTCCTGTTGTGACTAACAACGAG
rJMSF042O23+          GAGGAAAGTGAAGAGGAGGCAGAGATCTCCACTGGTGGTCCTGTTGTGACTAACAACGAG
rJMFF012H09+          GAGGAAAGTGAAGAGGAGGCAGAGATCTCCACTGGTGGTCCTGTTGTGACTAACAACGAG
rJMFF024O19+          GAGGAAAGTGAAGAGGAGGCAGAGATCTCCACTGGTGGTCCTGTTGTGACTAACAACGAG
rJMFF023O16+          GAGGAAAGTGAAGAGGAGGCAGAGATCTCCACTGGTGGTCCTGTTGTGACTAACAACGAG
                      ____________________________________________________________
consensus             GAGGAAAGTGAAGAGGAGGCAGAGATCTCCACTGGTGGTCCTGTTGTGACTAACAACGAG
 
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rJMSF047J17+          CACATTCCAATTCCAATTCTATCCAAGTCTCTTAAAAATACCAGTTTGGGTGAGAAGAAA
rJMSF042O23+          CACATTCCAATTCCAATTCTATCCAAGTCTCTTAAAAATACCAGTTTGGGTGAGAAGAAA
rJMFF012H09+          CACATTCCAATTCCAATTCTATCCAAGTCTCTTAAAAATACCAGTTTGGGTGAGAAGAAA
rJMFF024O19+          CACATTCCAATTCCAATTCTATCCAAGTCTCTTAAAAATACCAGTTTGGGTGAGAAGAAA
rJMFF023O16+          CACATTCCAATTCCAATTCTATCCAAGTCTCTTAAAAATACCAGTTTGGGTGAGAAGAAA
                      ____________________________________________________________
consensus             CACATTCCAATTCCAATTCTATCCAAGTCTCTTAAAAATACCAGTTTGGGTGAGAAGAAA
 
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rJMSF047J17+          CTCGGGCTCCCTAATCCTTCCGGAACAAAACCAGAAAATGGATACCTGGCTTGTTCATCA
rJMSF042O23+          CTCGGGCTCCCTAATCCTTCCGGAACAAAACCAGAAAATGGATACCTGGCTTGTTCATCA
rJMFF012H09+          CTCGGGCTCCCTAATCCTTCCGGAACAAAACCAGAAAATGGATACCTGGCTTGTTCATCA
rJMFF024O19+          CTCGGGCTCCCTAATCCTTCCGGAACAAAACCAGAAAATGGATACCTGGCTTGTTCATCA
rJMFF023O16+          CTCGGGCTCCCTAATCCTTCCGGAACAAAACCAGAAAATGGATACCTGGCTTGTTCATCA
rJMFF038G19+                                                             TGTTCATCA
                      ____________________________________________________________
consensus             CTCGGGCTCCCTAATCCTTCCGGAACAAAACCAGAAAATGGATACCTGGCTTGTTCATCA
 
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rJMSF047J17+          TCTGGGTACCGGAGCGCAGACGAGCAGCT-CCCTGCTAGCGTTAGCTTTGTGAAGCTAGC
rJMSF042O23+          TCTGGGTACCGGAGCGCAGACGAGCAGCT-CCCTGCTAGCGTTAGCTTTGTGAAGCTAGC
rJMFF012H09+          TCTGGGTACCGGAGCGCAGACGAGCAGCT-CCCTGCTAGCGTTAGCTTTGTGAAGCTAGC
rJMFF024O19+          TCTGGGTACCGGAGCGCAGACGAGCAGCT-CCCTGCTAGCGTTAGCTTTGTGAAGCTAGC
rJMFF023O16+          TCTGGGTACCGGAGCGCAGACGAGCAGCT-CCCTGCTAGCGTTAGCTTTGTGAAGCTAGC
rJMFF038G19+          TCTGGGTACCGGAGCGCAGACGAGCAGCTCCCCTGCTAGCGTTAGCTTTGTGAAGCTAGC
                      ____________________________________________________________
consensus             TCTGGGTACCGGAGCGCAGACGAGCAGCT-CCCTGCTAGCGTTAGCTTTGTGAAGCTAGC
 
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rJMSF047J17+          AGATATGACCGATGAAGAGTGGGCAACATTCTTAGAGAAGTTCCAAGAATTGCTCTACCC
rJMSF042O23+          AGATATGACCGATGAAGAGTGGGCAACATTCTTAGAGAAGTTCCAAGAATTGCTCTACCC
rJMFF012H09+          AGATATGACCGATGAAGAGTGGGCAACATTCTTAGAGAAGTTCCAAGAATTGCTCTACCC
rJMFF024O19+          AGATATGACCGATGAAGAGTGGGCAACATTCTTAGAGAAGTTCCAAGAATTGCTCTACCC
rJMFF023O16+          AGATATGACCGATGAAGAGTGGGCAACATTCTTAGAGAAGTTCCAAGAATTGCTCTACCC
rJMFF038G19+          AGATATGACCGATGAAGAGTGGGCAACATTCTTAGAGAAGTTCCAAGAATTGCTCTACCC
                      ____________________________________________________________
consensus             AGATATGACCGATGAAGAGTGGGCAACATTCTTAGAGAAGTTCCAAGAATTGCTCTACCC
 
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rJMSF047J17+          TGCATTTGCAAAGCGGAGGTCAGTGACTGTGGGTCGGAAGCAGCTTCAGAGGCTTGGAAC
rJMSF042O23+          TGCATTTGCAAAGCGGAGGTCAGTGACTGTGGGTCGGAAGCAGCTTCAGAGGCTTGGAAC
rJMFF012H09+          TGCATTTGCAAAGCGGAGGTCAGTGACTGTGGGTCGGAAGCAGCTTCAGAGGCTTGGAAC
rJMFF024O19+          TGCATTTGCAAAGCGGAGGTCAGTGACTGTGGGTCGGAAGCAGCTTCAGAGGCTTGGAAC
rJMFF023O16+          TGCATTTGCAAAGCGGAGGTCAGTGACTGTGGGTCGGAAGCAGCTTCAGAGGCTTGGAAC
rJMFF038G19+          TGCATTTGCAAAGCGGAGGTCAGTGACTGTGGGTCGGAAGCAGCTTCAGAGGCTTGGAAC
                      ____________________________________________________________
consensus             TGCATTTGCAAAGCGGAGGTCAGTGACTGTGGGTCGGAAGCAGCTTCAGAGGCTTGGAAC
 
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rJMSF047J17+          TTCTTGCCAGTTTTGACCTTTTCAGCGGCTCGGAACATCGTTCTTGCTAGGTTTGAGTTT
rJMSF042O23+          TTCTTGCCAGTTTTGACCTTTTCAGCGGCTCGGAACATCGTTCTTGCTAGGTTTGAGTTT
rJMFF012H09+          TTCTTGCCAGTTTTGACCTTTTCAGCGGCTCGGAACATCGTTCTTGCTAGGTTTGAGTTT
rJMFF024O19+          TTCTTGCCAGTTTTGACCTTTTCAGCGGCTCGGAACATCGTTCTTGCTAGGTTTGAGTTT
rJMFF023O16+          TTCTTGCCAGTTTTGACCTTTTCAGCGGCTCGGAACATCGTTCTTGCTAGGTTTGAGTTT
rJMFF038G19+          TTCTTGCCAGTTTTGACCTTTTCAGCGGCTCGGAACATCGTTCTTGCTAGGTTTGAGTTT
                      ____________________________________________________________
consensus             TTCTTGCCAGTTTTGACCTTTTCAGCGGCTCGGAACATCGTTCTTGCTAGGTTTGAGTTT
 
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rJMSF047J17+          TAAGGCACTGTCTTACTATGAATATAAGCATTAAGCAGGTATGGAATAAGAGTTTGCTGG
rJMSF042O23+          TAAGGCACTGTCTTACTATGAATATAAGCATTAAGCAGGTATGGAATAAGAGTTTGCTGG
rJMFF012H09+          TAAGGCACTGTCTTACTATGAATATAAGCATTAAGCAGGTATGGAATAAGAGTTTGCTGG
rJMFF024O19+          TAAGGCACTGTCTTACTATGAATATAAGCATTAAGCAGGTATGGAATAAGAGTTTGCTGG
rJMFF023O16+          TAAGGCACTGTCTTACTATGAATATAAGCATTAAGCAGGTATGGAATAAGAGTTTGCTGG
rJMFF038G19+          TAAGGCACTGTCTTACTATGAATATAAGCATTAAGCAGGTATGGAATAAGAGTTTGCTGG
                      ____________________________________________________________
consensus             TAAGGCACTGTCTTACTATGAATATAAGCATTAAGCAGGTATGGAATAAGAGTTTGCTGG
 
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rJMSF047J17+          CTTGTGGAAAGTAAAGGATTCGGATCCTAGCATAGGTAATAGGTGATTGGTGGCGGGAGT
rJMSF042O23+          CTTGTGGAAAGTAAAGGATTCGGATCCTAGCATAGGTAATAGGTGATTGGTGGCGGGAGT
rJMFF012H09+          CTTGTGGAAAGTAAAGGATTCGGATCCTAGCATAGGTAATAGGTGATTGGTGGCGGGAGT
rJMFF024O19+          CTTGTGGAAAGTAAAGGATTCGGATCCTAGCATAGGTAATAGGTGATTGGTGGCGGGAGT
rJMFF023O16+          CTTGTGGAAAGTAAAGGATTCGGATCCTAGCATAGGTAATAGGTGATTGGTGGCGGGAGT
rJMFF038G19+          CTTGTGGAAAGTAAAGGATTCGGATCCTAGCATAGGTAATAGGTGATTGGTGGCGGGAGT
                      ____________________________________________________________
consensus             CTTGTGGAAAGTAAAGGATTCGGATCCTAGCATAGGTAATAGGTGATTGGTGGCGGGAGT
 
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rJMSF047J17+          GGTAGTAGAAGGCCGGAGCTGTATATAGTTTTGTAGGCAGCAGCCGTTCGAATATGAGTC
rJMSF042O23+          GGTAGTAGAAGGCCGGAGCTGTATATAGTTTTGTAGGCAGCAGCCGTTCGAATATGAGTC
rJMFF012H09+          GGTAGTAGAAGGCCGGAGCTGTATATAGTTTTGTAGGCAGCAGCCGTTCGAATATGAGTC
rJMFF024O19+          GGTAGTAGAAGGCCGGAGCTGTATATAGTTTTGTAGGCAGCAGCCGTTCGAATATGAGTC
rJMFF023O16+          GGTAGTAGAAGGCCGGAGCTGTATATAGTTTTGTAGGCAGCAGCCGTTCGAATATGAGTC
rJMFF038G19+          GGTAGTAGAAGGCCGGAGCTGTATATAGTTTTGTAGGCAGCAGCCGTTCGAATATGAGTC
                      ____________________________________________________________
consensus             GGTAGTAGAAGGCCGGAGCTGTATATAGTTTTGTAGGCAGCAGCCGTTCGAATATGAGTC
 
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rJMSF047J17+          TTTGTTAGATAAATAAGTTGTAGAGTGTATT                             
rJMSF042O23+          TTTGTTAGATAAATAAGTGGTAGAG                                   
rJMFF012H09+          TTTGTTAGATAAATAAGTTGTAGAGTGTATTG                            
rJMFF024O19+          TTTGTTAGATAAATAAGTTGTAGAGTGTATTGTGAAAAGGAAAA-AAGAAAGCAATGTAA
rJMFF023O16+          TTTGTTAGATAAATAAGTTGTAGAGTGTATTGTGAAAAGGAAAA-AAGAAAGCAATGTAA
rJMFF038G19+          TTTGTTAGATAAATAAGTTGTAGAGTGTATTGTGAAAAGGAAAACAAGAAAGCAATGTAA
                      ____________________________________________________________
consensus             TTTGTTAGATAAATAAGTTGTAGAGTGTATTGTGAAAAGGAAAA-AAGAAAGCAATGTAA
 
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rJMFF024O19+          ATATTGGATTTCTTTTTTCTTGTACTGTCATTTTTCTTTGTATTTCTTTCAAGTAAATAA
rJMFF023O16+          ATATTGGATTTCTTTTTTCTTGTACTGTCATTTTTCTTTGTATTTCTTTCAAGTAAATAA
rJMFF038G19+          ATATTGGATTTCTTTTTTCTTGTACTGTCATTTTTCTTTGTATTTCTTTCAAGTAAATAA
                      ____________________________________________________________
consensus             ATATTGGATTTCTTTTTTCTTGTACTGTCATTTTTCTTTGTATTTCTTTCAAGTAAATAA
 
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rJMFF024O19+          AGT                                                         
rJMFF023O16+          AGT                                                         
rJMFF038G19+          AGTTCCAATAGAGATATCTTAGCGGCTTCTGTATATGATTTGGAATCAGGAGATAAGACC
                      ____________________________________________________________
consensus             AGTTCCAATAGAGATATCTTAGCGGCTTCTGTATATGATTTGGAATCAGGAGATAAGACC
 
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rJMFF038G19+          AGCTGCTTAGCCATATGAACAACTGAACAAGTATAGTTATAAAGTGGCAACCTCAGCCAA
                      ____________________________________________________________
consensus             AGCTGCTTAGCCATATGAACAACTGAACAAGTATAGTTATAAAGTGGCAACCTCAGCCAA