Contig 001163:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF037N09Sequence540014216ref|XP_010689967.1|9e-65PREDICTED: protein argonaute 5 [Beta vulgaris subsp. vulgaris]593001163 (2)gb|KDO37124.1|4e-39hypothetical protein CISIN_1g013458mg [Citrus sinensis]
JMFF048K11Sequence378011646 (14)462001163 (2)ref|XP_008778948.1|1e-13PREDICTED: protein argonaute 10, partial [Phoenix dactylifera]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF037N09+                 CAGCCATGCNGGTATCCAGGGGACCAGCCGTCCTGCCCATTACCATGTGCTGT
                      ____________________________________________________________
consensus                    CAGCCATGCNGGTATCCAGGGGACCAGCCGTCCTGCCCATTACCATGTGCTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF048K11+                                     CCTTGCAGAACTTGACAAACTGCCTGGGTTACA
rJMFF037N09+          TTGACGAGAACAGATTCNCTGCAGATGCCTTGCAGAACTTGACAAACTGCCTGTGTTACA
                      ____________________________________________________________
consensus             TTGACGAGAACAGATTCNCTGCAGATGCCTTGCAGAACTTGACAAACTGCCTGTGTTACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF048K11+          CATATGCTCGGGGCCCTAAATCAGTTTCCATTGTTCCCCCGGCATATTATGCCCATTTGG
rJMFF037N09+          CATATGCTCGGTGCANTAAATCAGTNTCCATTGTTCCACNTGCATATTATGCACATTTGG
                      ____________________________________________________________
consensus             CATATGCTCGGTGCCCTAAATCAGTTTCCATTGTTCCCCCTGCATATTATGCCCATTTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF048K11+          GGGCCTTTTGAGGTAGGTTTTATGTTGGGGGGGAAATATCAGAGGGATTTTTTGGAAAAT
rJMFF037N09+          CTGCCTTTCGAGNTAGGTATTATGTTGAGGATGAAATATCAGATGGATCTTCTGGAAAGT
                      ____________________________________________________________
consensus             GTGCCTTTTGAGGTAGGTTTTATGTTGGGGGTGAAATATCAGATGGATTTTTTGGAAAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF048K11+          CCGGGGGTGGCAGGGGTTCAAGGGGCAGGGATGCTAATGTTAAGCCCTTGCCTATAATCA
rJMFF037N09+          CCGGTGGTGGCAGGGCTACAAGGGACAGGGATGNTAATGTTAAGCCATTGCCTATAATCA
                      ____________________________________________________________
consensus             CCGGTGGTGGCAGGGGTTCAAGGGGCAGGGATGCTAATGTTAAGCCCTTGCCTATAATCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF048K11+          AGGGCAATGTGAAGGGTGTTATGTTTTTCTGGTGAAGAAAATAATTAGTTGTTTTTCTGG
rJMFF037N09+          AGGNCAATGNGAAGGCTGTTATGTTTTACTGNTGAAGAAAATANTTAGTTGTTTTACTGN
                      ____________________________________________________________
consensus             AGGGCAATGTGAAGGGTGTTATGTTTTTCTGGTGAAGAAAATAATTAGTTGTTTTTCTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF048K11+          GGAAGAAAAAAAATTAGTTGTTTTGCTGGGGAAGAAAAATACTTAATTGTTTTTTGCTAT
rJMFF037N09+          TGAAGAAAAATANTTAGTTGTTTTGCTGTGGAAGAAAAGTANTTAATTGTTTTTTGCTAT
                      ____________________________________________________________
consensus             TGAAGAAAAATAATTAGTTGTTTTGCTGTGGAAGAAAAGTACTTAATTGTTTTTTGCTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF048K11+          TCAACTTGGGTTTTGTTTAGGGCGGTTTTTTTTGCCCTTTTGGGGAAAGATATCCCAGGA
rJMFF037N09+          TCAACTTGGCTTNTGTTTAGTGCNGTTTTTTTTGCCATCTNGGAGATAGATATCCAAGGA
                      ____________________________________________________________
consensus             TCAACTTGGGTTTTGTTTAGTGCGGTTTTTTTTGCCCTTTTGGGGATAGATATCCCAGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF048K11+          TAATTCCAACGTTGGGGTTTTTTCAGGCCCAAAGTCAAGTTTGAAAACAAGAAAATTTTT
rJMFF037N09+          TAATTCAAACGTTGGTGTTTTGTCAGGCACAAAGTCAAGTTTGAAAACAAGANAATTATT
                      ____________________________________________________________
consensus             TAATTCCAACGTTGGTGTTTTTTCAGGCCCAAAGTCAAGTTTGAAAACAAGAAAATTTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF048K11+          AACTT                                                       
rJMFF037N09+          AACTTCTCGTGTTTTNGCGTATTTATTGTATTTACATATGGTAGATTTCACTTAAAACCA
                      ____________________________________________________________
consensus             AACTTCTCGTGTTTTNGCGTATTTATTGTATTTACATATGGTAGATTTCACTTAAAACCA