Contig 001160:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF037G08-                                           ATTTTTTATTTATTTATTTTTTTTTTG
                      ____________________________________________________________
consensus                                              ATTTTTTATTTATTTATTTTTTTTTTG
 
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JMFS084B07+                  ATAGTTCATTAATTCAAATCTGAGTACAAAGCCTTGACAATAAAAGGAGGGGA
JMFN037B15+                                                           AAAAGGAGGGGA
JMFN042G06+                  ATAGTTCATTAATTCAAATCTGAGTACAAAGCCTTGACAATAAAAGGAGGGGA
JMFN003H01+                  ATAGTTCATTAATTCAAATCTGAGTACAAAGCCTTGACAATAAAAGGAGGGGA
rJMFF037G08-          GGAATATATAGTTCATTAATTCAAATCTGAGTACAAAGCCTTGACAATAAAAGGAGGGGA
                      ____________________________________________________________
consensus             GGAATATATAGTTCATTAATTCAAATCTGAGTACAAAGCCTTGACAATAAAAGGAGGGGA
 
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JMFS084B07+           AGACGTCCACTCTTGACGCACAGACATAGAACAAGCTTCCCTAGCTAAACTATGGGCAGC
JMFN037B15+           AGACGTCCACTCTTGACGCACAGACATAGAACAAGCTTCCCTAGCTAAACTATGGGCAGC
JMFN030K16+                           CGCACAGACATAGAACAAGCTTCCCTAGCTAAACTATGGGCAGC
JMFN042G06+           AGACGTCCACTCTTGACGCACAGACATAGAACAAGCTTCCCTAGCTAAACTATGGGCAGC
JMFN003H01+           AGACGTCCACTCTTGACGCACAGACATAGAACAAGCTTCCCTAGCTAAACTATGGGCAGC
JMFF029L17+                                        AACAAGCTTCCCTAGCTAAACTATGGGCAGC
rJMFF029L17-                                                           CTATGGGCAGC
JMFF030F22+                                                               TGGGCAGC
JMSF049E03+                                                         AAACTATGGGCAGC
rJMFF037G08-          AGACGTCCACTCTTGACGCACAGACATAGAACAAGCTTCCCTAGCTAAACTATGGGCAGC
                      ____________________________________________________________
consensus             AGACGTCCACTCTTGACGCACAGACATAGAACAAGCTTCCCTAGCTAAACTATGGGCAGC
 
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JMFS084B07+           TGTATTCGCAGTGCGATTAAACATAAGAGATAGTTACACATAAAGTTGAACGTAGCAAAT
JMFN037B15+           TGTATTCGCAGTGCGATTAAACATAAGAGATAGTTACACATAAAGTTGAACGTAGCAAAT
JMFN030K16+           TGTATTCGCAGTGCGATTAAACATAAGAGATAGTTACACATAAAGTTGAACGTAGCAAAT
JMFN042G06+           TGTATTCGCAGTGCGATTAAACATAAGAGATAGTTACACATAAAGTTGAACGTAGCAAAT
JMSF032B11+                                                        TTGAACGTAGCAAAT
JMFN003H01+           TGTATTCGCAGTGCGATTAAACATAAGAGATAGTTACACATAAAGTTGAACGTAGCAAAT
JMFF029L17+           TGTATTCGCAGTGCGATTAAACATAAGAGATAGTTACACATAAAGTTGAACGTAGCAAAT
rJMFF029L17-          TGTATTCGCAGTGCGATTAAACATAAGAGATAGTTACACATAAAGTTGAACGTAGCAAAT
rJMSF049E03-                             AACATAAGAGATAGTTACACATAAAGTTGAACGTAGCAAAT
JMFF030F22+           TGTATTCGCAGTGCGATTAAACATAAGAGATAGTTACACATAAAGTTGAACGTAGCAAAT
JMSF049E03+           TGTATTCGCAGTGCGATTAAACATAAGAGATAGTTACACATAAAGTTGAACGTAGCAAAT
rJMFF037G08-          TGTATTCGCAGTGCGATTAAACATAANAGATAGTTACACATAAAGTTGAACGTAGCAAAT
                      ____________________________________________________________
consensus             TGTATTCGCAGTGCGATTAAACATAAGAGATAGTTACACATAAAGTTGAACGTAGCAAAT
 
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JMFS084B07+           CTTTAATGCGATTAAACATAAGAGATAGTTACACATAAAGTTGAACGTAGCAAATCTTTA
JMFN037B15+           CTTTAATGCGATTAAACATAAGAGATAGTTACACATAAAGTTGAACGTAGCAAATCTTTA
JMFN030K16+           CTTTAATGCGATTAAACATAAGAGATAGTTACACATAAAGTTGAACGTAGCAAATCTTTA
JMFN042G06+           CTTTAATGCGATTAAACATAAGAGATAGTTACACATAAAGTTGAACGTAGCAAATCTTTA
JMSF032B11+           CTTTAATGCGATTAAACATAAGAGATAGTTACACATAAAGTTGAACGTAGCAAATCTTTA
JMFN003H01+           CTTTAATGCGATTAAACATAAGAGATAGTTACACATAAAGTTGAACGTAGCAAATCTTTA
JMFF029L17+           CTTTAATGCGATTAAACATAAGAGATAGTTACACATAAAGTTGAACGTAGCAAATCTTTA
rJMFF029L17-          CTTTAATGCGATTAAACATAAGAGATAGTTACACATAAAGTTGAACGTAGCAAATCTTTA
rJMSF049E03-          CTTTAATGCGATTAAACATAAGAGATAGTTACACATAAAGTTGAACGTAGCAAATCTTTA
JMFF030F22+           CTTTAATGCGATTAAACATAAGAGATAGTTACACATAAAGTTGAACGTAGCAAATCTTTA
JMSF049E03+           CTTTAATGCGATTAAACATAAGAGATAGTTACACATAAAGTTGAACGTAGCAAATCTTTA
rJMSF032B11-                                           CATAAAGTTGAACGTAGCAAATCTTTA
rJMFF037G08-          CTTTAATGCGATTAAACATAANAGATAGTTACACATAAAGTTGAACGTAGCAAATCTTTA
                      ____________________________________________________________
consensus             CTTTAATGCGATTAAACATAAGAGATAGTTACACATAAAGTTGAACGTAGCAAATCTTTA
 
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JMFS084B07+           ATATCGAGCAGAACAAGATCACACACAAGTGCCGTTCATAATATATTTCTCGCAACTAGC
JMFN037B15+           ATATCGAGCAGAACAAGATCACACACAAGTGCCGTTCATAATATATTTCTCGCAACTAGC
JMFN030K16+           ATATCGAGCAGAACAAGATCACACACAAGTGCCGTTCATAATATATTTCTCGCAACTAGC
JMFN042G06+           ATATCGAGCAGAACAAGATCACACACAAGTGCCGTTCATAATATATTTCTCGCAACTAGC
JMSF032B11+           ATATCGAGCAGAACAAGATCACACACAAGTGCCGTTCATAATATATTTCTCGCAACTAGC
JMFN003H01+           ATATCGAGCAGAACAAGATCACACACAAGTGCCGTTCATAATATATTTCTCGCAACTAGC
JMFF029L17+           ATATCGAGCAGAACAAGATCACACACAAGTGCCGTTCATAATATATTTCTCGCAACTAGC
rJMFF029L17-          ATATCGAGCAGAACAAGATCACACACAAGTGCCGTTCATAATATATTTCTCGCAACTAGC
rJMSF049E03-          ATATCGAGCAGAACAAGATCACACACAAGTGCCGTTCATAATATATTTCTCGCAACTAGC
JMFF030F22+           ATATCGAGCAGAACAAGATCACACACAAGTGCCGTTCATAATATATTTCTCGCAACTAGC
JMSF049E03+           ATATCGAGCAGAACAAGATCACACACAAGTGCCGTTCATAATATATTTCTCGCAACTAGC
rJMSF032B11-          ATATCGAGCAGAACAAGATCACACACAAGTGCCGTTCATAATATATTTCTCGCAACTAGC
rJMFF037G08-          ATATCGAGCANAACAAGATCACACACAAGTGCCGTTCATAATATATTTCTCGCAACTAGC
                      ____________________________________________________________
consensus             ATATCGAGCAGAACAAGATCACACACAAGTGCCGTTCATAATATATTTCTCGCAACTAGC
 
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JMFS084B07+           TGCTGCTGGACAATTCTTGCAATCGTCGTCGGTTTCACACTTCCCACAACCACCCTCCTT
JMFN037B15+           TGCTGCTGGACAATTCTTGCAATCGTCGTCGGTTTCACACTTCCCACAACCACCCTCCTT
JMFN030K16+           TGCTGCTGGACAATTCTTGCAATCGTCGTCGGTTTCACACTTCCCACAACCACCCTCCTT
JMFN042G06+           TGCTGCTGGACAATTCTTGCAATCGTCGTCGGTTTCACACTTCCCACAACCACCCTCCTT
JMSF032B11+           TGCTGCTGGACAATTCTTGCAATCGTCGTCGGTTTCACACTTCCCACAACCACCCTCCTT
JMFN003H01+           TGCTGCTGGACAATTCTTGCAATCGTCGTCGGTTTCACACTTCCCACAACCACCCTCCTT
JMFF029L17+           TGCTGCTGGACAATTCTTGCAATCGTCGTCGGTTTCACACTTCCCACAACCACCCTCCTT
rJMFF029L17-          TGCTGCTGGACAATTCTTGCAATCGTCGTCGGTTTCACACTTCCCACAACCACCCTCCTT
rJMSF049E03-          TGCTGCTGGACAATTCTTGCAATCGTCGTCGGTTTCACACTTCCCACAACCACCCTCCTT
JMFF030F22+           TGCTGCTGGACAATTCTTGCAATCGTCGTCGGTTTCACACTTCCCACAACCACCCTCCTT
JMSF049E03+           TGCTGCTGGACAATTCTTGCAATCGTNGTCGGTTTCACACTTCCCACAACCACCCTCCTT
rJMSF032B11-          TGCTGCTGGACAATTCTTGCAATCGTCGTCGGTTTCACACTTCCCACAACCACCCTCCTT
rJMFF037G08-          TGCTGCTGGACAATTCTTGCAATCGTCGTCGGTTTCACACTTCCCACAACCACCCTCCTT
                      ____________________________________________________________
consensus             TGCTGCTGGACAATTCTTGCAATCGTCGTCGGTTTCACACTTCCCACAACCACCCTCCTT
 
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JMFS084B07+           TGCCTTGCTTTTCTTCACCACCATTTCCAAAGTGGAGTCAAATCCAACACAATGACCGAT
JMFN037B15+           TGCCTTGCTTTTCTTCACCACCATTTCCAAAGTGGAGTCAAATCCAACACAATGACCGAT
JMFN030K16+           TGCCTTGCTTTTCTTCACCACCATTTCCAAAGTGGAGTCAAATCCAACACAATGACCGAT
JMFN042G06+           TGCCTTGCTTTTCTTCACCACCATTTCCAAAGTGGAGTCAAATCCAACACAATGACCGAT
JMSF032B11+           TGCCTTGCTTTTCTTCACCACCATTTCCAAAGTGGAGTCAAATCCAACACAATGACCGAT
JMFN003H01+           TGCCTTGCTTTTCTTCACCACCATTTCCAAAGTGGAGTCAAATCCAACACAATGACCGAT
JMFF029L17+           TGCCTTGCTTTTCTTCACCACCATTTCCAAAGTGGAGTCAAATCCAACACAATGACCGAT
rJMFF029L17-          TGCCTTGCTTTTCTTCACCACCATTTCCAAAGTGGAGTCAAATCCAACACAATGACCGAT
rJMSF049E03-          TGCCTTGCTTTTCTTCACCACCATTTCCAAAGTGGAGTCAAATCCAACACAATGACCGAT
JMFF030F22+           TGCCTTGCTTTTCTTCACCACCATTTCCAAAGTGGAGTCAAATCCAACACAATGACCGAT
JMSF049E03+           TGCCTTGCTTTTCTTCACCACCATTTCCAAAGTGGAGTCAAATCCAACACAATGACCGAT
rJMSF032B11-          TGCCTTGCTTTTCTTCACCACCATTTCCAAAGTGGAGTCAAATCCAACACAATGACCGAT
rJMFF037G08-          TGCCTTGCTTTTCTTCACCACCATTTCCAAAGNGGAGTCAAATCCAACACAATGACCGAT
                      ____________________________________________________________
consensus             TGCCTTGCTTTTCTTCACCACCATTTCCAAAGTGGAGTCAAATCCAACACAATGACCGAT
 
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JMFS084B07+           TTCAGATCCAGAGATTTCGTTGATGCAGAAGTTGGTTGAGTATACACTATTGGCTTTGCA
JMFN037B15+           TTCAGATCCAGAGATTTCGTTGATGCAGAAGTTGGTTGAGTATACACTATTGGCTTTGCA
JMFN030K16+           TTCAGATCCAGAGATTTCGTTGATGCAGAAGTTGGTTGAGTATACACTATTGGCTTTGCA
JMFN042G06+           TTCAGATCCAGAGATTTCGTTGATGCAGAAGTTGGTTGAGTATACACTATTGGCTTTGCA
JMSF032B11+           TTCAGATCCAGAGATTTCGTTGATGCAGAAGTTGGTTGAGTATACACTATTGGCTTTGCA
JMFN003H01+           TTCAGATCCAGAGATTTCGTTGATGCAGAAGTTGGTTGAGTATACACTATTGGCTTTGCA
JMFF029L17+           TTCAGATCCAGTGATTTCGTTGATGCAGAAGTTGGTTGAGTATACACTATTGGCTTTGCA
rJMFF029L17-          TTCAGATCCAGTGATTTCGTTGATGCAGAAGTTGGTTGAGTATACACTATTGGCTTTGCA
rJMSF049E03-          TTCAGATCCAGAGATTTCGTTGATGCAGAAGTTGGTTGAGTATACACTATTGGCTTTGCA
JMFF030F22+           TTCAGATCCAGAGATTTCGTTGATGCAGAAGTTGGTTGAGTATACACTATTGGCTTTGCA
JMSF049E03+           TTCAGATCCAGAGATTTCGTTGATGCAGAAGTTGGTTGAGTATACACTATTGGCTTTGCA
rJMSF032B11-          TTCAGATCCAGAGATTTCGTTGATGCAGAAGTTGGTTGAGTATACACTATTGGCTTTGCA
rJMFF037G08-          TTCANATCCANANATTTCGTTGATGCANAAGTTGGTTGAGTATACACTATTGGCTTTGCA
                      ____________________________________________________________
consensus             TTCAGATCCAGAGATTTCGTTGATGCAGAAGTTGGTTGAGTATACACTATTGGCTTTGCA
 
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JMFS084B07+           GTCATCATGAGACTTGCAAAGCTGCCCAGTCATAAACAATTGCTTCTTGTTTGGTCCTAC
JMFN037B15+           GTCATCATGAGACTTGCAAAGCTGCCCAGTCATAAACAATTGCTTCTTGTTTGGTCCTAC
JMFN030K16+           GTCATCATGAGACTTGCAAAGCTGCCCAGTCATAAACAATTGCTTCTTGTTTGGTCCTAC
JMFN042G06+           GTCATCATGAGACTTGCAAAGCTGCCCAGTCATAAACAATTGCTTCTTGTTTGGTCCTAC
JMSF032B11+           GTCATCATGAGACTTGCAAAGCTGCCCAGTCATAAACAATTGCTTCTTGTTTGGTCCTAC
JMFN003H01+           GTCATCATGAGACTTGCAAAGCTGCCCAGTCATAAACAATTGCTTCTTGTTTGGTCCTAC
JMFF029L17+           GTCATCATGAGACTTGCAAAGCTGCCCAGTCATAAACAATTGCTTCTTGTTTGGTCCTAC
rJMFF029L17-          GTCATCATGAGACTTGCAAAGCTGCCCAGTCATAAACAATTGCTTCTTGTTTGGTCCTAC
rJMSF049E03-          GTCATCATGAGACTTGCAAAGCTGCCCAGTCATAAACAATTGCTTCTTGTTTGGTCCTAC
JMFF030F22+           GTCATCATGAGACTTGCAAAGCTGCCCAGTCATAAACAATTGCTTCTTGTTTGGTCCTAC
JMSF049E03+           GTCATCATGAGACTTGCAAAGCTGCCCAGTCATAAACAATTGCTTCTTGTTTGGTCCTAC
rJMSF032B11-          GTCATCATGAGACTTGCAAAGCTGCCCAGTCATAAACAATTGCTTCTTGTTTGGTCCTAC
rJMFF037G08-          GTCATCATGANACTTGCAAAGCTGCCCAGTCATAAACAATTGCTTCTTGTTTGGTCCTAC
                      ____________________________________________________________
consensus             GTCATCATGAGACTTGCAAAGCTGCCCAGTCATAAACAATTGCTTCTTGTTTGGTCCTAC
 
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JMFS084B07+           ACTTACCTGTGCCATCATAATTGATGGCAACAAAGATGCAACCATGAAAAAGGCTAGTAA
JMFN037B15+           ACTTACCTGTGCCATCATAATTGATGGCAACAAAGATGCAACCATGAAAAAGGCTAGTAA
JMFN030K16+           ACTTACCTGTGCCATCATAATTGATGGCAACAAAGATGCAACCATGAAAAAGGCTAGTAA
JMFN042G06+           ACTTACCTGTGCCATCATAATTGATGGCAACAAAGATGCAACCATGAAAAAGGCTAGTAA
JMSF032B11+           ACTTACCTGTGCCATCATAATTGATGGCAACACTGCAACA                    
JMFN003H01+           ACTTACCTGTGCCATCATAATTGATGGCAACAAAGATGCAACCATGAAAAAGGCTAGTAA
JMFF029L17+           ACTTACCTGTGCCATCATAATTGATGGCAACAAAGATGCAACCATGAAAAAGGCTAGTAA
rJMFF029L17-          ACTTACCTGTGCCATCATAATTGATGGCAACAAAGATGCAACCATGAAAAAGGCTAGTAA
rJMSF049E03-          ACTTACCTGTGCCATCATAATTGATGGCAACAAAGATGCAACCATGAAAAAGGCTAGTAA
JMFF030F22+           ACTTACCTGTGCCATCATAATTGATGGCAACAAAGATGCAACCATGAAAAAGGCTAGTAA
JMSF049E03+           ACTTACCTGTGCCATCATAATTGATGGCAACAAAGATGCAACCATGAAAAAGGCTAGTAA
rJMSF032B11-          ACTTACCTGTGCCATCATAATTGATGGCAACACTGCAACA                    
rJMFF037G08-          ACTTACCTGNGCCATCATAATTGATGGCAACAAANATGCAACCATGAAAAAGGCTAGTAA
                      ____________________________________________________________
consensus             ACTTACCTGTGCCATCATAATTGATGGCAACAAAGATGCAACCATGAAAAAGGCTAGTAA
 
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JMFS084B07+           GAGCAGCAGCTTGATTGAATGTCTCTCCATCTCTTGTTTTGG                  
JMFN037B15+           GAGCAGCAGCTTGATTGAATGTCTC                                   
JMFN030K16+           GAGCAGCAGCTTGATTGAATGTCTC                                   
JMFN042G06+           GAGCAGCAGCTTGATTGAATGTCTCTCCATCTC                           
JMFN003H01+           GAGCAGCAGCTTGATTGAA                                         
JMFF029L17+           GAGCAGCAGCTTGATTGAATGTCTCTCCATCTCTTGTTTTGACCTT              
rJMFF029L17-          GAGCAGCAGCTTGATTGAATGTCTCTCCATCTCTTGTTTTGACCTT              
rJMSF049E03-          GAGCAGCAGCTTGATTGAATGTCTCTCCATCTCTTGTTTTGGCCTTGAATCT        
JMFF030F22+           GAGCAGCAGCTTGATTGAATGTCTCTCCATCTCTTGTTTTGGCCTTGAATCT        
JMSF049E03+           GAGCAGCAGCTTGATTGAATGTCTCTCCATCTCTTGTTTTGGCCTTGAATCT        
rJMFF037G08-          GAGCAGCAGCTTGATTGAATGTCTCTCCATCTCTTGTTTTGGCCTTGAATCTTCAGCCGG
                      ____________________________________________________________
consensus             GAGCAGCAGCTTGATTGAATGTCTCTCCATCTCTTGTTTTGGCCTTGAATCTTCAGCCGG