| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF011H08 | Sequence | 531 | 013314 (46) | ref|XP_006339914.1| | 1e-25 | PREDICTED: patatin-05-like [Solanum tuberosum] | 268 | 001157 (4) | |||
| JMFF037C17 | Sequence | 600 | 013314 (46) | ref|XP_007202991.1| | 1e-41 | hypothetical protein PRUPE_ppa019010mg [Prunus persica] gb|EMJ04190.1| hypotheti | 760 | 001157 (4) | ref|XP_006388385.1| | 5e-56 | hypothetical protein POPTR_0202s00220g [Populus trichocarpa] gb|ERP47299.1| hypo |
| JMFF047O22 | Sequence | 439 | 013314 (46) | ref|XP_004148074.1| | 5e-28 | PREDICTED: patatin group A-3-like [Cucumis sativus] | 320 | 001157 (4) | ref|XP_007202991.1| | 2e-06 | hypothetical protein PRUPE_ppa019010mg [Prunus persica] gb|EMJ04190.1| hypotheti |
| JMFN003L04 | Sequence | 498 | 001157 (4) | ref|XP_009626816.1| | 3e-31 | PREDICTED: patatin-like protein 3 [Nicotiana tomentosiformis] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF037C17+ CTTTGATATCAAGACCTTCCCAGCCCGGTAGTTTTTACCAC
____________________________________________________________
consensus CTTTGATATCAAGACCTTCCCAGCCCGGTAGTTTTTACCAC
. : . : . : . : . : . :
rJMFF037C17+ CTGTGACGTTAAGGATTCCCCCGAAAAGAATGCTAAGTTGTCCGACATATGCATCGGAAC
____________________________________________________________
consensus CTGTGACGTTAAGGATTCCCCCGAAAAGAATGCTAAGTTGTCCGACATATGCATCGGAAC
. : . : . : . : . : . :
rJMFF037C17+ CTCCGCCGCTCCGACTTACTTACCCGGCCATTACTTCGAGACCACCGACGCTAACGGCGC
____________________________________________________________
consensus CTCCGCCGCTCCGACTTACTTACCCGGCCATTACTTCGAGACCACCGACGCTAACGGCGC
. : . : . : . : . : . :
rJMFF037C17+ AAAGGTCGAGTATAACCTCGTCGACGGCGGTGTTTTGGGGTGGCTGTCTCAAGGGGACGG
____________________________________________________________
consensus AAAGGTCGAGTATAACCTCGTCGACGGCGGTGTTTTGGGGTGGCTGTCTCAAGGGGACGG
. : . : . : . : . : . :
JMFN003L04- CCGATATGGTGGATTATCATCTCGC
rJMFF037C17+ TAACCCTTTGATTGATGTGTTCTCCGATGCAAGTTCCGATATGGTGGATTATCATCTCGC
____________________________________________________________
consensus TAACCCTTTGATTGATGTGTTCTCCGATGCAAGTTCCGATATGGTGGATTATCATCTCGC
. : . : . : . : . : . :
JMFN003L04- CACCATTTTCCGTGCCCTTAACGCCGGAGATAATTATCTCCGCATTCAGGAGGATAATTT
rJMFF037C17+ CACCATTTTCCGTGCCCTTAACGCCGGAGATAATTATCTCCGCATTCAGGAGGATAATTT
____________________________________________________________
consensus CACCATTTTCCGTGCCCTTAACGCCGGAGATAATTATCTCCGCATTCAGGAGGATAATTT
. : . : . : . : . : . :
JMFN003L04- ACGAGGGTCAGCATCCTCGGTGGATGTTACGACAACAGAAAACTTGAATGCACTTGAACA
rJMFF037C17+ ACGAGGGTCAGCATCCTCGGTGGATGTTACGACAACAGAAAACTTGAATGCACTTGAACA
____________________________________________________________
consensus ACGAGGGTCAGCATCCTCGGTGGATGTTACGACAACAGAAAACTTGAATGCACTTGAACA
. : . : . : . : . : . :
JMFN003L04- AATTGGCAAAAACTTGTTGAAGAAAGCAGTATCGAAGTTGGATATATTAACAGGGCAATA
rJMFF047O22+ CGAAGTTGGATATATTAACAGGGCAATA
rJMFF037C17+ AATTGGCAAAAACTTGTTGAAGAAAGCAGTATCGAAGTTGGATATATTAACAGGGCAATA
____________________________________________________________
consensus AATTGGCAAAAACTTGTTGAAGAAAGCAGTATCGAAGTTGGATATATTAACAGGGCAATA
. : . : . : . : . : . :
JMFN003L04- TGAACCGATCGAAGGCGCTGGAACAAACCAAGATGCTCTGAAAAGGTTTGCTAAATTGCT
rJMFF047O22+ TGAACCGATCGAAGGCGCTGGAACAAACCAAGATGCTCTGAAAAGGTTTGCTAAATTGCT
rJMFF011H08+ AGGCGCTGGANCAANCCAAGATGCTCTGAAAAGGTTTGCTAAATTGCT
rJMFF037C17+ TGAACCGATCGAAGGCGCTGGAACAAACCAAGATGCTCTGAAAAGGTTTGCTAAATTGCT
____________________________________________________________
consensus TGAACCGATCGAAGGCGCTGGAACAAACCAAGATGCTCTGAAAAGGTTTGCTAAATTGCT
. : . : . : . : . : . :
JMFN003L04- CTCTGACGAGAAGAAACGCCGAATCGCCGCTTCTGCCACCGCTGTCCAGT-AATTGATAT
rJMFF047O22+ CTCTGACGAGAAGAAACGCCGAATCGCCGCTTCTGCCACCGCTGTCCAGT-AATTGATAT
rJMFF011H08+ CTCTGACGAGAAGAAACGCCGAATCGCCGCTTCTGCCACCGCTGTCCAGTAAATTGATAT
rJMFF037C17+ CTCTGACGAGAAGAAACGCCGAATCGCCGCTTCTGCCACCGCTGTCCAGT-AATTGATAT
____________________________________________________________
consensus CTCTGACGAGAAGAAACGCCGAATCGCCGCTTCTGCCACCGCTGTCCAGT-AATTGATAT
. : . : . : . : . : . :
JMFN003L04- GTTGATCATCAGTGATTTCCGAAGTACTTTGAATTGATTTACTGGAAGTCCATAACCTTA
rJMFF047O22+ GTTGATCATCAGTGATTTCCGAAGTACTTTGAATTGATTTACTGGAAGTCCATAACCTTA
rJMFF011H08+ GTTGATCATCAGTGATTTCCGAAGTACTTTGAATTGATTTACTGGAAGTCCATAACCTTA
rJMFF037C17+ GTTGATCATCAGTGATTTCCGAAGTACTTTGAATTGATTTACTGGAAGTCCATAACCTTA
____________________________________________________________
consensus GTTGATCATCAGTGATTTCCGAAGTACTTTGAATTGATTTACTGGAAGTCCATAACCTTA
. : . : . : . : . : . :
JMFN003L04- TTATACCCGAGATCACTTCTTTAATTACATAATAATAATGAGATTGAGTGCCTTTTATTT
rJMFF047O22+ TTATACCCGAGATCACTTCTTTAATTACATAATAATAATGAGATTGAGTGCCTTTTATTT
rJMFF011H08+ TTATACCCGAGATCACTTCTTTAATTACATAATAATAATGAGATTGAGTGCCTTTTATTT
rJMFF037C17+ TTATACCCGAGATCACTTCTTTAATTACATAATAATAATGAGATTGAGTGCCTTTTATTT
____________________________________________________________
consensus TTATACCCGAGATCACTTCTTTAATTACATAATAATAATGAGATTGAGTGCCTTTTATTT
. : . : . : . : . : . :
JMFN003L04- TCTGGTTCTTGAATTGTACTTGTTATGAGAACAATAAAGGTTTGTATTGAATCC
rJMFF047O22+ TCTGGTTCTTGAATTGTACTTGTTATGAGAACAATAAAGGTTTGTATTGAA
rJMFF011H08+ TCTGGTTCTTGAATTGTACTTGTTATGAGAACAATAAAGG
rJMFF037C17+ TCTGGTTCTTGAATTGTACTTGTTATGAGAACAATAAAGGTTTGTATTGAATCCTTTTCT
____________________________________________________________
consensus TCTGGTTCTTGAATTGTACTTGTTATGAGAACAATAAAGGTTTGTATTGAATCCTTTTCT