Contig 001149:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002F14Sequence608001149 (7)ref|XP_009800601.1|2e-114PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochon768001149 (7)ref|XP_004145686.1|5e-82PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochon
JMFF022J20Sequence461001149 (7)ref|XP_009800601.1|1e-80PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochon598001149 (7)gb|EYU34773.1|2e-65hypothetical protein MIMGU_mgv1a011509mg [Erythranthe guttata]
JMFF035C07Sequence530000197 (2)ref|XP_009598927.1|2e-92PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochon746001149 (7)emb|CDP08405.1|4e-92unnamed protein product [Coffea canephora]
JMFF045A13Sequence613000197 (2)ref|XP_009800601.1|3e-115PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochon571001149 (7)emb|CDP08405.1|5e-61unnamed protein product [Coffea canephora]
JMFN002C12Sequence498001149 (7)emb|CDP08405.1|3e-70unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFF002F14-              ATTGGTTTTCCGGCCATGGCGTCCAGTTTGGTCCGACGAGCGATAACTAAGGTGTCA
                      ____________________________________________________________
consensus                ATTGGTTTTCCGGCCATGGCGTCCAGTTTGGTCCGACGAGCGATAACTAAGGTGTCA
 
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JMFF002F14-           TCCTCCCCGGCGGCGAAGATGACTTTGGCGAGAGCCCACGCTTCGGAGGCGAATGCCCCG
                      ____________________________________________________________
consensus             TCCTCCCCGGCGGCGAAGATGACTTTGGCGAGAGCCCACGCTTCGGAGGCGAATGCCCCG
 
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JMFF022J20-                                      AAGTTCCAAATTTACCGGTGGAGCCCCGAGAAC
JMFF002F14-           CAGGCGACGGCGAGCGCGAAAATCAAGAAGTTCCAAATTTACCGGTGGAGCCCCGAGAAC
                      ____________________________________________________________
consensus             CAGGCGACGGCGAGCGCGAAAATCAAGAAGTTCCAAATTTACCGGTGGAGCCCCGAGAAC
 
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JMFF022J20-           CCACAGAAGCCGGAGCTGCAGGAGTACGAGATTGATCTGAAGGAGTGTGGGCCGATGGTG
JMFF002F14-           CCACAGAAGCCGGAGCTGCAGGAGTACGAGATTGATCTGAAGGAGTGTGGGCCGATGGTG
                      ____________________________________________________________
consensus             CCACAGAAGCCGGAGCTGCAGGAGTACGAGATTGATCTGAAGGAGTGTGGGCCGATGGTG
 
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JMFF022J20-           CTGGACGCTCTGATCAAGATAAAGAACGAGATCGACCCGACGCTGACTTTCCGGCGGTCG
JMFF002F14-           CTGGACGCTCTGATCAAGATAAAGAACGAGATCGACCCGACGCTGACTTTCCGGCGGTCG
rJMFF002F14+                                                                CGGTCG
                      ____________________________________________________________
consensus             CTGGACGCTCTGATCAAGATAAAGAACGAGATCGACCCGACGCTGACTTTCCGGCGGTCG
 
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JMFF022J20-           TGCCGGGAGGGCATCTGCGGGTCGTGCGCGATGAACATCGACGGC-AAGAATGGGCTGGC
JMFF002F14-           TGCCGGGAGGGCATCTGCGGGTCGTGCGCGATGAACATCGACGGC-AAGAATGGGCTGGC
rJMFF002F14+          TGCCGGGAGGGCATCTGCGGGTCGTGCGCGATGAACATCGACGGCAAAGAATGGGCTGGC
                      ____________________________________________________________
consensus             TGCCGGGAGGGCATCTGCGGGTCGTGCGCGATGAACATCGACGGC-AAGAATGGGCTGGC
 
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JMFF022J20-           CTGCCTGACGAAGATCTCGTCGGGGCCGGACTCGATGGTAACGCCGCTCCCACACATGTT
JMFF002F14-           CTGCCTGACGAAGATCTCGTCGGGGCCGGACTCGATGGTAACGCCGCTCCCACACATGTT
rJMFF002F14+          CTGCCTGACGAAGATCTCGTCGGGGCCGGACTCGATGGTAACGCCGCTCCCACACATGTT
                      ____________________________________________________________
consensus             CTGCCTGACGAAGATCTCGTCGGGGCCGGACTCGATGGTAACGCCGCTCCCACACATGTT
 
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JMFF022J20-           CGTGATCAAGGATCTGGTGGTGGACATGACCAACTTCTACAACCA               
JMFF002F14-           CGTGATCAAGGATCTGGTGGTGGACATGACCAACTTCTACAA-CCAGTACAAGTCCATAG
rJMFF002F14+          CGTGATCAAGGATCTGGTGGTGGACATGACCAACTTCTACAACCCAGTACAAGTCCATAG
                      ____________________________________________________________
consensus             CGTGATCAAGGATCTGGTGGTGGACATGACCAACTTCTACAACCCAGTACAAGTCCATAG
 
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JMFF002F14-           AGCCATGGCTGAAGCGAAAGAACCCGCCGCCGATCCCCGGCAAGGAGGTCCTCCAGAGCA
rJMFF022J20+                                                               CAGAGCA
rJMFF002F14+          AGCCATGGCTGAAGCGAAAGAACCCGCCGCCGATCCCCGGCAAGGAGGTCCTCCAGAGCA
rJMFF045A13+                                               CGGCAAAGAGATTCTTCAGAGCA
JMFN002C12-                                                                CAGAGCA
rJMFF035C07+                                                               CAGAGCA
                      ____________________________________________________________
consensus             AGCCATGGCTGAAGCGAAAGAACCCGCCGCCGATCCCCGGCAAGGAGGTCCTCCAGAGCA
 
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JMFF002F14-           AAGCCGATAGATCTAAGCTCGACGGCATGTACGAGTGCATTCTCTGCGCCTGTTGTAGCA
rJMFF022J20+          AANCCGATAGATCTAAGCTCGACGGCATGTACGAGTGCATTCTCTGCGCCTGTTGTAGCA
rJMFF002F14+          AAGCCGATAGATCTAAGCTCGACGGCATGTACGAGTGCATTCTCTGCGCCTGTTGTAGCA
rJMFF045A13+          AGGCCGATAGAGTTAAGCTGGATGGGATGTTCGAGTGCATTTTTTGCGCCTGCTGTAGCA
JMFN002C12-           AGGCCGATAGAGCTAAGCTGGATGGGATGTACGAGTGCATTCTCTGCGCCTGCTGTAGCA
rJMFF035C07+          AGGCCGATAGAGCTAAGCTGGATGGGATGTACGAGTGCATTCTCTGCGCCTGCTGTAGCA
                      ____________________________________________________________
consensus             AGGCCGATAGATCTAAGCTGGATGGGATGTACGAGTGCATTCTCTGCGCCTGTTGTAGCA
 
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JMFF002F14-           CATCCTGCCCTAG                                               
rJMFF022J20+          CATCCTGCCCTAGTTACTGGTGGAACCCTGAGTCTTATCTTGGCCCCGCCGCTCTCCTCC
rJMFF002F14+          CATCCTGCCCTAGTTACTGGTGGAACCCTGAGTCTTATCTTGGCCCCGCCGCTCTCCTCC
rJMFF045A13+          CATCCTGCCCTAGTTACTGGTGGAACCCAGAGTTTTATTTTGGCCCCGCCGCCCTCCTCC
JMFN002C12-           CATCCTGCCCTAGTTACTGGTGGAACCCAGAGTCTTATCTTGGCCCCGCCGCCCTCCTCC
rJMFF035C07+          CATCCTGCCCTAGTTACTGGTGGAACCCAGAGTCTTATCTTGGCCCCGCCGCCCTCCTCC
                      ____________________________________________________________
consensus             CATCCTGCCCTAGTTACTGGTGGAACCCAGAGTCTTATCTTGGCCCCGCCGCCCTCCTCC
 
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rJMFF022J20+          ATGCCAACCGATGGATAATGGACAGCCGTGATGAATACACCAAGGAGCGTCTGGAGGCAG
rJMFF002F14+          ATGCCAACCGATGGATAATGGACAGCCGTGATGAATACACCAAGGAGCGTCTGGAGGCAG
rJMFF045A13+          ATGCCAACAGATGGATAATGGACAGCCGTGATGAATATACCAAGGCTCGCCTTGAAGCAG
JMFN002C12-           ATGCCAACAGATGGATAATGGACAGCCGTGATGAATATACCAAGGAGCGCCTTGAAGCAG
rJMFF035C07+          ATGCCAACAGATGGATAATGGACAGCCGTGATGAATATACCAAGGAGCGCCTTGAAGCAG
                      ____________________________________________________________
consensus             ATGCCAACAGATGGATAATGGACAGCCGTGATGAATATACCAAGGAGCGCCTTGAAGCAG
 
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rJMFF022J20+          TTGATCACGAGTTCAAACTTTATCGCTGCCATACAATCTTGAACTGCGCCAAAGCTTGCC
rJMFF002F14+          TTGATCACGAGTTCAAACTTTATCGCTGCCATACAATCTTGAACTGCGCCAAAGCTTGCC
rJMFF045A13+          TTGATCATGAATTCAAGCTTTATCGCTGCCATACTATTTTGAATTGTGCCAAAGCTTGCC
JMFN002C12-           TTGATCATGAATTCAAGCTTTATCGCTGCCATACTATTTTGAATTGTGCCAAAGCTTGCC
rJMFF035C07+          TTGATCATGAATTCAAGCTTTATCGCTGCCATACTATTTTGAATTGTGCCAAAGCTTGCC
                      ____________________________________________________________
consensus             TTGATCATGAATTCAAGCTTTATCGCTGCCATACTATTTTGAATTGTGCCAAAGCTTGCC
 
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rJMFF022J20+          CAAAGGGATTGAATCCCGGGAAGCAAATCCAGAACATCAAGGCACTAGAGGTTAACAG  
rJMFF002F14+          CAAAGGGATTGAATCCCGGGAAGCAAATCCAGAACATCAAGGCACTAGAGGTTAACAG  
rJMFF045A13+          CAAAGGGACTGAATCCTGGAAAACAAATCCAGAATATCAAGGCACTAGAGGTTAACAGAC
JMFN002C12-           CAAAGGGACTGAATCCTGGAAAACAAATCCAGAATATCAAGGCACTAGAGGTTAACAG  
rJMFF035C07+          CAAAGGGACTGAATCCTGGAAAACAAATCCAGAATATCAAGGCACTAGAGGTTAACAGAC
                      ____________________________________________________________
consensus             CAAAGGGACTGAATCCTGGAAAACAAATCCAGAATATCAAGGCACTAGAGGTTAACAGAC
 
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rJMFF045A13+          GATTTGTATGAATTCAGATTTTCTGTTTATGAAGTTAGTACCCCTTAGACAAAATAATAT
rJMFF035C07+          GATTTGTATGAATTCAGATTTTCTGTTTATGAAGTTAGTACACCTTAGACAAAATAATAT
                      ____________________________________________________________
consensus             GATTTGTATGAATTCAGATTTTCTGTTTATGAAGTTAGTACCCCTTAGACAAAATAATAT
 
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rJMFF045A13+          GCTGATATGCAAACCTTCTGGTTTACCAATTTTTTGACCTTGTGTCCGAGGTCCTTGTTT
rJMFF035C07+          GCTGATATGCAAACCTTCTGGTTTACCAATTTTTTGACCTTGTGTCCGAGGTCCTTGTTT
                      ____________________________________________________________
consensus             GCTGATATGCAAACCTTCTGGTTTACCAATTTTTTGACCTTGTGTCCGAGGTCCTTGTTT
 
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rJMFF045A13+          TTTTTAAAACTTTTGTAAGTCAGCTTGTGCCATCTTTAAACTATGTCTTGAGCATTATTT
rJMFF035C07+          CTCTTAAAACTTTTGTAAGTCAGCTTGTGCCATCTTTAAACTATGTCTTGAGCATTATTC
                      ____________________________________________________________
consensus             TTTTTAAAACTTTTGTAAGTCAGCTTGTGCCATCTTTAAACTATGTCTTGAGCATTATTT
 
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rJMFF045A13+          TCCTATCCTTAATGGAAAGTGTGACGTTTTGGGGTACTGCACAGATGTACCTCACTGTGT
rJMFF035C07+          TCCTATCCTTAATGGAAAGTGTGACGTTCTGGGGTACTGCACAGATGTACCTCACTGTGT
                      ____________________________________________________________
consensus             TCCTATCCTTAATGGAAAGTGTGACGTTTTGGGGTACTGCACAGATGTACCTCACTGTGT
 
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rJMFF045A13+          ATGTGTTT                                                    
rJMFF035C07+          ATGTGTTTATATATGCTTCAGTATGTTTATGTGTGCTGTTCTAATTAACAAATTTAGGAT
                      ____________________________________________________________
consensus             ATGTGTTTATATATGCTTCAGTATGTTTATGTGTGCTGTTCTAATTAACAAATTTAGGAT