Contig 001148:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018K08Sequence509004547 (6)ref|XP_009612346.1|8e-10PREDICTED: patellin-3-like [Nicotiana tomentosiformis]735001148 (8)ref|XP_009617344.1|2e-75PREDICTED: patellin-3-like [Nicotiana tomentosiformis]
JMFF021O08Sequence500004547 (6)ref|XP_004241867.1|7e-10PREDICTED: patellin-3-like [Solanum lycopersicum]540001148 (8)ref|XP_009617344.1|3e-42PREDICTED: patellin-3-like [Nicotiana tomentosiformis]
JMFF023N14Sequence554004547 (6)ref|XP_004241867.1|9e-10PREDICTED: patellin-3-like [Solanum lycopersicum]703001148 (8)ref|XP_009617344.1|5e-67PREDICTED: patellin-3-like [Nicotiana tomentosiformis]
JMFF027O14Sequence551004547 (6)ref|XP_004241867.1|9e-10PREDICTED: patellin-3-like [Solanum lycopersicum]680001148 (8)ref|XP_009617344.1|7e-63PREDICTED: patellin-3-like [Nicotiana tomentosiformis]
JMFF034F01Sequence515004547 (6)ref|XP_009612346.1|8e-10PREDICTED: patellin-3-like [Nicotiana tomentosiformis]683001148 (8)ref|XP_009617344.1|2e-63PREDICTED: patellin-3-like [Nicotiana tomentosiformis]
JMFF036K13Sequence406004547 (6)ref|XP_009612346.1|2e-08PREDICTED: patellin-3-like [Nicotiana tomentosiformis]402001148 (8)gb|EYU22784.1|2e-07hypothetical protein MIMGU_mgv1a003476mg [Erythranthe guttata]
JMFS035E03Sequence585001148 (8)ref|XP_009617344.1|7e-52PREDICTED: patellin-3-like [Nicotiana tomentosiformis]
JMFS050A03Sequence613001148 (8)ref|XP_009617344.1|1e-51PREDICTED: patellin-3-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMFF018K08+                                               CAAAGAGCAAGTTTGTCTTTGCA
                      ____________________________________________________________
consensus                                                  CAAAGAGCAAGTTTGTCTTTGCA
 
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rJMFF018K08+          GGCCNTTCCAAATGCGCCGAGACACTNTTCAAGTATATCGCCCCGGAGCAAGTACCTGTT
rJMFF023N14+                         GCCGAGACACTCTTCAAGTATATCGCCCCGGAGCAAGTACCTGTT
rJMFF027O14+                                                CGCCCCGGAGCAAGTACCTGTT
rJMFF034F01+                                                CGCCCCGGAGCAAGTACCTGTT
                      ____________________________________________________________
consensus             GGCCNTTCCAAATGCGCCGAGACACTCTTCAAGTATATCGCCCCGGAGCAAGTACCTGTT
 
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rJMFF018K08+          CAGTATGGCGGGCTTAGCAGAGAGGGCGATTATGAGTTCACCACTGGTGACCCTGCAACC
rJMFF023N14+          CAGTATGGCGGGCTTAGCAGAGAGGGCGATTATGAGTTCACCACTGGTGACCCTGCAACC
rJMFF027O14+          CAGTATGGCGGGCTTAGCAGAGAGGGCGATTATGAGTTCACCACTGGTGACCCTGCAACC
JMFS035E03-                                         TATGAGTTCACCACTGGTGACCCTGCAACC
JMFS050A03-                                        TTATGAGTTCACCACTGGTGACCCTGCAACC
rJMFF034F01+          CAGTATGGCGGGCTTAGCAGAGAGGGCGATTATGAGTTCACCACTGGTGACCCTGCAACC
                      ____________________________________________________________
consensus             CAGTATGGCGGGCTTAGCAGAGAGGGCGATTATGAGTTCACCACTGGTGACCCTGCAACC
 
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rJMFF018K08+          GAGGACACTATCAAGCCAACTTCCAAGCACACTATTGAGTTCCCGGTTACTGAGAAGTGC
rJMFF023N14+          GAGGACACTATCAAGCCAACTTCCAAGCACACTATTGAGTTCCCGGTTACTGAGAAGTGC
rJMFF027O14+          GAGGACACTATCAAGCCAACTTCCAAGCACACTATTGAGTTCCCGGTTACTGAGAAGTGC
JMFS035E03-           GAGGACACTATCAAGCCAACTTCCAAGCACACTATTGAGTTCCCGGTTACTGAGAAGTGC
JMFS050A03-           GAGGACACTATCAAGCCAACTTCCAAGCACACTATTGAGTTCCCGGTTACTGAGAAGTGC
rJMFF021O08+                                CCAAGCACACTATTGAGTTCCCGGTTACTGAGAAGTGC
rJMFF034F01+          GAGGACACTATCAAGCCAACTTCCAAGCACACTATTGAGTTCCCGGTTACTGAGAAGTGC
                      ____________________________________________________________
consensus             GAGGACACTATCAAGCCAACTTCCAAGCACACTATTGAGTTCCCGGTTACTGAGAAGTGC
 
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rJMFF018K08+          ACATTGGTTTGGGAGGCGAGGGTGATAGGTTGGGACGTGGCCTATGGGTCCGAGTTCGTG
rJMFF023N14+          ACATTGGTTTGGGAGGCGAGGGTGATAGGTTGGGACGTGGCCTATGGGTCCGAGTTCGTG
rJMFF027O14+          ACATTGGTTTGGGAGGCGAGGGTGATAGGTTGGGACGTGGCCTATGGGTCCGAGTTCGTG
JMFS035E03-           ACATTGGTTTGGGAGGCGAGGGTGATAGGTTGGGACGTGGCCTATGGGTCCGAGTTCGTG
JMFS050A03-           ACATTGGTTTGGGAGGCGAGGGTGATAGGTTGGGACGTGGCCTATGGGTCCGAGTTCGTG
rJMFF021O08+          ACATTGGTTTGGGAGGCGAGGGTGATAGGTTGGGACGTGGCCTATGGGTCCGAGTTCGTG
rJMFF034F01+          ACATTGGTTTGGGAGGCGAGGGTGATAGGTTGGGACGTGGCCTATGGGTCCGAGTTCGTG
                      ____________________________________________________________
consensus             ACATTGGTTTGGGAGGCGAGGGTGATAGGTTGGGACGTGGCCTATGGGTCCGAGTTCGTG
 
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rJMFF018K08+          CCTGCTGCTGAAGGCGCGTACACGATCATCGTAGAGAAATCGCGGAAAATTGGACCGGCT
rJMFF023N14+          CCTGCTGCTGAAGGCGCGTACACGATCATNGTAGAGAAATCGCGGAAAATTGGACCGGCT
rJMFF027O14+          CCTGCTGCTGAAGGCGCGTACACGATCATCGTAGAGAAATCGCGGAAAATTGGACCGGCT
JMFS035E03-           CCTGCTGCTGAAGGCGCGTACACGATCATCGTAGAGAAATCGCGGAAAATTGGACCGGCT
JMFS050A03-           CCTGCTGCTGAAGGCGCGTACACGATCATCGTAGAGAAATCGCGGAAAATTGGACCGGCT
rJMFF021O08+          CCTGCTGCTGAAGGCGCGTACACGATCATCGTAGAGAAATCGCGGAAAATTGGACCGGCT
rJMFF036K13+                                       CGTAGAGAAATCGCGGAAAATTGGACCGGCT
rJMFF034F01+          CCTGCTGCTGAAGGCGCGTACACGATCATCGTAGAGAAATCGCGGAAAATTGGACCGGCT
                      ____________________________________________________________
consensus             CCTGCTGCTGAAGGCGCGTACACGATCATCGTAGAGAAATCGCGGAAAATTGGACCGGCT
 
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rJMFF018K08+          GATGAGACGATAATCAGCAACAGCTACAAAACAGATTGTGCAGGAAAGGTGGTGCTCACA
rJMFF023N14+          GATGAGACGATAATCAGCAACAGCTACAAAACAGATTGTGCAGGAAAGGTGGTGCTCACA
rJMFF027O14+          GATGAGACGATAATCAGCAACAGCTACAAAACAGATTGTGCAGGAAAGGTGGTGCTCACA
JMFS035E03-           GATGAGACGATAATCAGCAACAGCTACAAAACAGATTGTGCAGGAAAGGTGGTGCTCACA
JMFS050A03-           GATGAGACGATAATCAGCAACAGCTACAAAACAGATTGTGCAGGAAAGGTGGTGCTCACA
rJMFF021O08+          GATGAGACGATAATCAGCAACAGCTACAAAACAGATTGTGCAGGAAAGGTGGTGCTCACA
rJMFF036K13+          GATGAGNCGATAATCAGCNACAGATNCAAAACAGATTGTNCANGAAAGGTGGTGCTCNCA
rJMFF034F01+          GATGAGACGATAATCAGCAACAGCTACAAAACAGATTGTGCAGGAAAGGTGGTGCTCACA
                      ____________________________________________________________
consensus             GATGAGACGATAATCAGCAACAGCTACAAAACAGATTGTGCAGGAAAGGTGGTGCTCACA
 
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rJMFF018K08+          TTTGACAACCAAACTTCCAAGAGGAAGAAGCTTCTCTATAGGTCCAAGACCAAGGGCTCT
rJMFF023N14+          TTTGACAACCAAACTTCCAAGAGGAAGAAGCTTCTCTATAGGTCCAAGACCAAGGGCTNT
rJMFF027O14+          TTTGACAACCAAACTTCCAAGAGGAAGAAGCTTCTCTATAGGTCCAAGACCAAGGGCTCT
JMFS035E03-           TTTGACAACCAAACTTCCAAGAGGAAGAAGCTTCTCTATAGGTCCAAGACCAAGGGCTCT
JMFS050A03-           TTTGACAACCAAACTTCCAAGAGGAAGAAGCTTCTCTATAGGTCCAAGACCAAGGGCTCT
rJMFF021O08+          TTTGACAACCAAACTTCCAAGAGGAAGAAGCTTCTCTATAGGTCCAAGACCAAGGGCTNT
rJMFF036K13+          TTTGNCANCCAAACTTCCAAGAGGAAGAAGCTTCTCTATAGGTCCAAGACCAAGGGNTTT
rJMFF034F01+          TTTGACAACCAAACTTCCAAGAGGAAGAAGCTTCTCTATAGGTCCAAGACCAAGGGCTCT
                      ____________________________________________________________
consensus             TTTGACAACCAAACTTCCAAGAGGAAGAAGCTTCTCTATAGGTCCAAGACCAAGGGCTCT
 
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rJMFF018K08+          GATTGAAGAAAGGGACAATTTCTTGTGGCTCTTCAAGCTCAATCACAGTACAACTGGACT
rJMFF023N14+          GATTGAAGAAAGGGACAATTTCTTGTGGCTCTTCAAGCTCAATCACAGTACAACTGGACT
rJMFF027O14+          GATTGAAGAAAGGGACAATTTCTTGTGGCTCTTCAAGCTCAATCACAGTACAACTGGACT
JMFS035E03-           GATTGAAGAAAGGGACAATTTCTTGTGGCTCTTCAAGCTCAATCACAGTACAACTGGACT
JMFS050A03-           GATTGAAGAAAGGGACAATTTCTTGTGGCTCTTCAAGCTCAATCACAGTACAACTGGACT
rJMFF021O08+          GATTGAAGAAAGGGACAATTTCTTGTGGCTCTTCAAGCTCAATCACAGTACAACTGGACT
rJMFF036K13+          GANTGAAGAAAGGGACAATTTNTTGTGGCTCTTCAAGNTCAATCACAGTACAACTGGANT
rJMFF034F01+          GATTGAAGAAAGGGACAATTTCTTGTGGCTCTTCAAGCTCAATCACAGTACAACTGGACT
                      ____________________________________________________________
consensus             GATTGAAGAAAGGGACAATTTCTTGTGGCTCTTCAAGCTCAATCACAGTACAACTGGACT
 
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rJMFF018K08+          GCACAATAATTTGTTCATTTATAGATTTTTACCCCCCTGTTTCATATTAAATTTAGTGGT
rJMFF023N14+          GCACAATAATTTGTTCATTTATAGATTTTTACCCCCCTGTTTCATATTAAATTTAGTGGT
rJMFF027O14+          GCACAATAATTTGTTCATTTATAGATTTTTACCCCCCTGTTTCATATTAAATTTAGTGGT
JMFS035E03-           GCACAATAATTTGTTCATTTATAGATTTTTACCCCCCTGTTTCATATTAAATTTAGTGGT
JMFS050A03-           GCACAATAATTTGTTCATTTATAGATTTTTACCCCCCTGTTTCATATTAAATTTAGTGGT
rJMFF021O08+          GCACAATAATTTGTTCATTTATAGATTTTTACCCCCCTGTTTCATATTAAATTTAGTGGT
rJMFF036K13+          GCACAATAATTTGTTCATTTATAGATTTTTCCCCCCCTGTTTCATATTAAATTTAGTGGT
rJMFF034F01+          GCACAATAATTTGTTCATTTATAGATTTTTACCCCCCTGTTTCATATTAAATTTAGTGGT
                      ____________________________________________________________
consensus             GCACAATAATTTGTTCATTTATAGATTTTTACCCCCCTGTTTCATATTAAATTTAGTGGT
 
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rJMFF018K08+          TAAGAGTTTGGGATATT-TATTTAATATTTGTTGGGA-TTTTTTTTGTGAACAATTGTTG
rJMFF023N14+          TAAGAGTTTGGGATATT-TATTTAATATTTGTTGGGA-TTTTTTTTGTGAACAATTGTTG
rJMFF027O14+          TAAGAGTTTGGGATATT-TATTTAATATTTGTTGGGA-TTTTTTTTGTGAACAATTGTTG
JMFS035E03-           TAAGAGTTTGGGATATT-TATTTAATATTTGTTGGGATTTTTTTTTGTGAACAATTGTTG
JMFS050A03-           TAAGAGTTTGGGATATT-TATTTAATATTTGTTGGGATTTTTTTTTGTGAACAATTGTTG
rJMFF021O08+          TAAGAGTTTGGGATATT-TATTTAATATTTGTTGGGA-TTTTTTTTGTGAACAATTGTTG
rJMFF036K13+          TAAGAGTTTGGGATATTCTATTTAATATTTNNTGGGA-TTTTTTTTGTGAACAATTGTCG
rJMFF034F01+          TAAGAGTTTGGGATATT-TATTTAATATTTGTTGGGA-TTTTTTTTGTGAACAATTGTTG
                      ____________________________________________________________
consensus             TAAGAGTTTGGGATATT-TATTTAATATTTGTTGGGA-TTTTTTTTGTGAACAATTGTTG
 
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rJMFF018K08+          GTGTTTTGACTGTTTGTGTGGTCTTTTGATATAATGGGAAAAAGCAAGGAGAATGGCTGG
rJMFF023N14+          GTGTTTTGACTGTTTGTGTGGTCTTTTGATATAATGGGAAAAAGCAAGGAGAATGGCTGG
rJMFF027O14+          GTGTTTTGACTGTTTGTGTGGTCTTTTGATATAATGGGAAAAAGCAAGGAGAATGGCTGG
JMFS035E03-           GTGTTTTGACTGTTTGTGTGGTCTTTTGATATAATGGGAAAAAGCAAGGAGAATGGCTGG
JMFS050A03-           GTGTTTTGACTGTTTGTGTGGTCTTTTGATATAATGGGAAAAAGCAAGGAGAATGGCTGG
rJMFF021O08+          GTGTTTTGACTGTTTGTGTGGTCTTTTGATATAATGGGAAAAAGCAAGGAGAATGGCTGG
rJMFF036K13+          GTGTTTGGACTGTTNGTGTGGTCTTNNGATATAATGGGAAAAAGCAAGGAGAATGGCNGG
rJMFF034F01+          GTGTTTTGACTGTTTGTGTGGTCTTTTGATATAATGGGAAAAAGCAAGGAGAATGGCTGG
                      ____________________________________________________________
consensus             GTGTTTTGACTGTTTGTGTGGTCTTTTGATATAATGGGAAAAAGCAAGGAGAATGGCTGG
 
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rJMFF018K08+          GTGAAAGGAGAACATCAGTGACAGTGTATACAGGGTTGTGTTAATGTGGACAGA      
rJMFF023N14+          GTGAAAGGAGAACATCAGTGACAGTGTATACAGGGTTGTGTTAATGTGGACAGA      
rJMFF027O14+          GTGAAAGGAGAACATCAGTGACAGTGTATACAGGGTTGTGTTAATGTGGACAGA      
JMFS035E03-           GTGAAAGGAGAACATC                                            
JMFS050A03-           GTGAAAGGAGAACATCAGTGACAGTGTATACAGGG                         
rJMFF021O08+          GTGAAAGGAGAACATCAGTGACAG                                    
rJMFF036K13+          GTGAAAGGAGAA                                                
rJMFF034F01+          GTGAAAGGAGAACATCAGTGACAGTGTATACAGGGTTGTGTTAATGTGGACAGAACTTTT
                      ____________________________________________________________
consensus             GTGAAAGGAGAACATCAGTGACAGTGTATACAGGGTTGTGTTAATGTGGACAGAACTTTT