| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002B15 | Sequence | 543 | 004440 (5) | ref|XP_006354941.1| | 8e-38 | PREDICTED: B3 domain-containing protein Os01g0723500-like [Solanum tuberosum] | 696 | 001146 (5) | ref|XP_009781396.1| | 9e-59 | PREDICTED: B3 domain-containing protein Os01g0723500-like isoform X2 [Nicotiana |
| JMFF009G02 | Sequence | 589 | 004440 (5) | ref|XP_009588431.1| | 1e-65 | PREDICTED: B3 domain-containing protein Os01g0723500-like isoform X2 [Nicotiana | 458 | 001146 (5) | |||
| JMFF026C19 | Sequence | 483 | 004440 (5) | ref|XP_006354941.1| | 9e-16 | PREDICTED: B3 domain-containing protein Os01g0723500-like [Solanum tuberosum] | 610 | 001146 (5) | ref|XP_009781396.1| | 2e-39 | PREDICTED: B3 domain-containing protein Os01g0723500-like isoform X2 [Nicotiana |
| JMFF034C05 | Sequence | 481 | 004440 (5) | ref|XP_009781397.1| | 2e-57 | PREDICTED: B3 domain-containing protein Os01g0723500-like isoform X3 [Nicotiana | 724 | 001146 (5) | ref|XP_009781396.1| | 5e-61 | PREDICTED: B3 domain-containing protein Os01g0723500-like isoform X2 [Nicotiana |
| JMSF014J23 | Sequence | 378 | 004440 (5) | ref|XP_006354941.1| | 2e-08 | PREDICTED: B3 domain-containing protein Os01g0723500-like [Solanum tuberosum] | 613 | 001146 (5) | ref|XP_006354945.1| | 2e-86 | PREDICTED: B3 domain-containing protein Os01g0723500-like isoform X3 [Solanum t |
This contig is upended
. : . : . : . : . : . :
rJMSF014J23+ CTTACATACTCAATTGAATGCTACCGGTGGACAATCAGTTACT
____________________________________________________________
consensus CTTACATACTCAATTGAATGCTACCGGTGGACAATCAGTTACT
. : . : . : . : . : . :
rJMSF014J23+ CGAAAATGCACCAGTTCTCAAGACAAACTAGGTTCTTCCACTAAGGGCTGTATGTCATTA
____________________________________________________________
consensus CGAAAATGCACCAGTTCTCAAGACAAACTAGGTTCTTCCACTAAGGGCTGTATGTCATTA
. : . : . : . : . : . :
rJMSF014J23+ AAGTCAGCACCTGAAGAAAAAATAGCTGCTCAAGCTTTCATTTCTAGCTTTCCGCATTTT
rJMFF002B15+ AAAAATAGCTGCTCAAGCTTTCATTTNTAGCTTTCCGCATTTT
rJMFF034C05+ TTTT
____________________________________________________________
consensus AAGTCAGCACCTGAAGAAAAAATAGCTGCTCAAGCTTTCATTTCTAGCTTTCCGCATTTT
. : . : . : . : . : . :
rJMSF014J23+ GTGAGAGTCATGAAGAAGTTCAATATTAGTGGCTCATACACCTTGAAAGTCCCATATCAG
rJMFF002B15+ GNGAGAGTCATGAAGAAGTTCAATATTAGTGGCTCATNCACCTTGAAAGTCCCATATCAG
rJMFF026C19+ CTTGAAAGTCCCATATCAG
rJMFF034C05+ GTGAGAGTCATGAAGAAGTTCAATATTAGTGGCTCATACACCTTGAAAGTCCCATATCAG
____________________________________________________________
consensus GTGAGAGTCATGAAGAAGTTCAATATTAGTGGCTCATACACCTTGAAAGTCCCATATCAG
. : . : . : . : . : . :
rJMSF014J23+ TTCTCTATGGAGCATCTACCAAACTGCAGAACACAAATTATCCTCCGTAATTTAAAAGGA
rJMFF002B15+ TTCTCTATGGAGCATNTACCANANTGCAGAACACAAATTATCCTCNGTAATTTAAAAGGA
rJMFF026C19+ TTCTCTATGGAGCATGTACCANANTGCAGAACACAAATTATCCTCCGTAATTTAAAAGGA
rJMFF034C05+ TTCTCTATGGAGCATCTACCAAACTGCAGAACACAAATTATCCTCCGTAATTTAAAAGGA
____________________________________________________________
consensus TTCTCTATGGAGCATCTACCAAACTGCAGAACACAAATTATCCTCCGTAATTTAAAAGGA
. : . : . : . : . : . :
rJMSF014J23+ CAAAGCTGGACAGTAAATTCTGTCCCGACAACTAGGGTGCAAACACTGCATACATTCTGT
rJMFF002B15+ CAAAGCTGGACAGTAAATTCTGTCCNGACAACTAGGGTGCAANCACTGCATACATTNTGN
rJMFF026C19+ CAAAGNTGGACAGTAAATTNTGTCCNGACAACTAGGGTGCAAACACTGCATACATTCTGT
rJMFF034C05+ CAAAGCTGGACAGTAAATTCTGTCCCGACAACTAGGGTGCAAACACTGCATACATTCTGT
____________________________________________________________
consensus CAAAGCTGGACAGTAAATTCTGTCCCGACAACTAGGGTGCAAACACTGCATACATTCTGT
. : . : . : . : . : . :
rJMSF014J23+ GGAGGATGGATGGCCTTTGTTCGAGATAATGACATCCAAATGGGAGATATCTGCATTTTT
rJMFF002B15+ GGAGGATGGATGGCCTTTGTTCGAGATAATGACATCCAAATGGGAGATATNTGCATTTTT
rJMFF026C19+ GGAGGATGGATGGCCTTTGTTCGAGATAATGACATCCAAATGGGAGATATNTGCATTTTT
rJMFF034C05+ GGAGGATGGATGGCCTTTGTTCGAGATAATGACATCCAAATGGGAGATATCTGCATTTTT
____________________________________________________________
consensus GGAGGATGGATGGCCTTTGTTCGAGATAATGACATCCAAATGGGAGATATCTGCATTTTT
. : . : . : . : . : . :
rJMSF014J23+ GAGTTGGTTGGGAAGTGTGAAATGCGTGTACATATTTGTGCAATTGGGAAAAAAGGTTTG
rJMFF002B15+ GAGTTGGTTGGGAAGTGTGAAATGCGTGTACATATTTGTGCAATTGGGAAAAAAGGTTTG
rJMFF026C19+ GAGTTGGTTGGGAAGTGTGAAATGCGTGTACATATTTGTGCAATTGGGAAAAAAGGTTTG
rJMFF009G02+ ATGCGTGTACATATTTGTGCAATTGGNAAAAAAGGTTTG
rJMFF034C05+ GAGTTGGTTGGGAAGTGTGAAATGCGTGTACATATTTGTGCAATTGGGAAAAAAGGTTTG
____________________________________________________________
consensus GAGTTGGTTGGGAAGTGTGAAATGCGTGTACATATTTGTGCAATTGGGAAAAAAGGTTTG
. : . : . : . : . : . :
rJMSF014J23+ GATTACCAAAATGGGAGCATTTGACATGGTTGCTTTGTCCTCTACAAACAAGAGACCTCA
rJMFF002B15+ GATTACCAAAATGGGAGCATTTGACATGGTTGNTTTGTCCTCTACAANCAAGAGACCTCA
rJMFF026C19+ GATTACCAAAATGGGAGCATTTGACATGGTTGCTTTGTCCTNTACAANCAAGAGACCTCA
rJMFF009G02+ GATTACCAAAATGGGAGCATTTGACATGGTTGCTTTGTCCTCTACAAACAAGAGACCTCA
rJMFF034C05+ GATTACCAAAATGGGAGCATTTGACATGGTTGCTTTGTCCTCTACAAACAAGAGACCTCA
____________________________________________________________
consensus GATTACCAAAATGGGAGCATTTGACATGGTTGCTTTGTCCTCTACAAACAAGAGACCTCA
. : . : . : . : . : . :
rJMSF014J23+ AGATAATTTAGCTGGTCTTCATTTTGCAAAAGGTTAACAACTTATGGATGTCCTGGTGAT
rJMFF002B15+ AGATAATTTAGNTGGTNTTCATTTTGCAAAAGGTTAACAACTTATGGATGTCNTGGTGAT
rJMFF026C19+ AGATAATTTAGNTGGTNTTCATTTTGCAAAAGGTTAACAACTTATGGATGTCNTGGTGAT
rJMFF009G02+ AGATAATTTAGCTGGTCTTCATTTTGCAAAAGGTTAACAACTTATGGATGTCCTGGTGAT
rJMFF034C05+ AGATAATTTAGCTGGTCTTCATTTTGCAAAAGGTTAACAACTTATGGATGTCCTGGTGAT
____________________________________________________________
consensus AGATAATTTAGCTGGTCTTCATTTTGCAAAAGGTTAACAACTTATGGATGTCCTGGTGAT
. : . : . : . : . : . :
rJMSF014J23+ GGATATGCAGGATTGCATGGTCTCCAACT
rJMFF002B15+ GGATATGCAGGATTGCATGGTCTCCAACTNGACATTTTGTAAAGGTGAAAACTGGGGCCA
rJMFF026C19+ GGATATGCAGGATTGCATGGTCTCCAACTNGACATTTTGTAAAGGTGAAAACTGGGGCCA
rJMFF009G02+ GGATATGCAGGATTGCATGGTCTCCAACTCGACATTTTGTAAAGGTGAAAACTGGGGCCA
rJMFF034C05+ GGATATGCAGGATTGCATGGTCTCCAACTCGACATTTTGTAAAGGTGAAAACTGGGGCCA
____________________________________________________________
consensus GGATATGCAGGATTGCATGGTCTCCAACTCGACATTTTGTAAAGGTGAAAACTGGGGCCA
. : . : . : . : . : . :
rJMFF002B15+ CATGTGCTGGACGTTATGCGGGAAAATGCGCATGGAAGATGANTNNGACATCTGAATTTT
rJMFF026C19+ CATGTGCTGGACGTTATGCGGGAAAATGCGCATGGAAGATGANTACGACATCTGAATTTT
rJMFF009G02+ CATGTGCTGGACGTTATGCGGGAAAATGCGCATGGAAGATGACTACGACATCTGAATTTT
rJMFF034C05+ CATGTGCTGGACGTTATGCGGGAAAATGCGCATGGAAGATGACTACGACATCTGAATTTT
____________________________________________________________
consensus CATGTGCTGGACGTTATGCGGGAAAATGCGCATGGAAGATGACTACGACATCTGAATTTT
. : . : . : . : . : . :
rJMFF002B15+ GTTGTTTTTGCTGACCTATGTGGTNGAAACTTTACATACGGNTAATGTGTAAAACTATGT
rJMFF026C19+ GTTGTTTTTGCTGACCTATGTGGTTGAAACTTTACATACGGNTAATGTGTAAAACTATGT
rJMFF009G02+ GTTGTTTTTGCTGACCTATGTGGTTGAAACTTTACATACGGTTAATGTGTAAAACTATGT
rJMFF034C05+ GTTGTTTTTGCTGACCTATGTGGTTGAAACTTTACATACGGTTAATGTGTAAAACTATGT
____________________________________________________________
consensus GTTGTTTTTGCTGACCTATGTGGTTGAAACTTTACATACGGTTAATGTGTAAAACTATGT
. : . : . : . : . : . :
rJMFF002B15+ ATGTCTGGGTCACTTTTGTAAGTATACATTATGCGTACTGTGTAGTGTAAT
rJMFF026C19+ ATGTCTGGGTCACTTTTGTAAGTATACATTATGNGTACTGTGTAGTGTAAT
rJMFF009G02+ ATGTCTGGGTCACTTTTGTAAGTATACATTATGTGTACTGTGTAGTGTAATTATTGCCGG
rJMFF034C05+ ATGTCTGGGTCACTCTTGTAAGTATACATTATGTGTACTGTGTAGTGTAATTATTGCCGG
____________________________________________________________
consensus ATGTCTGGGTCACTTTTGTAAGTATACATTATGTGTACTGTGTAGTGTAATTATTGCCGG
. : . : . : . : . : . :
rJMFF009G02+ AGATTGTGAGTCCAGCTCTGTACAGAAGAAAAAATTCGCAATTATTTCAAGGACAAAAC
rJMFF034C05+ AGATTGTGAGTCCAGCTCTGTACAGAAGAAAAAATTCGCAATTATTTCAAGGACAAAACA
____________________________________________________________
consensus AGATTGTGAGTCCAGCTCTGTACAGAAGAAAAAATTCGCAATTATTTCAAGGACAAAACA