Contig 001144:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF033H21Sequence537001144 (7)ref|XP_011085366.1|160PREDICTED: uncharacterized protein LOC105167377 [Sesamum indicum]670001144 (7)ref|XP_011085366.1|160PREDICTED: uncharacterized protein LOC105167377 [Sesamum indicum]
JMFN007M10Sequence625001144 (7)ref|XP_011085366.1|154PREDICTED: uncharacterized protein LOC105167377 [Sesamum indicum]
JMFN012K04Sequence625001144 (7)ref|XP_011085366.1|160PREDICTED: uncharacterized protein LOC105167377 [Sesamum indicum]
JMFN013J07Sequence627001144 (7)ref|XP_011085366.1|160PREDICTED: uncharacterized protein LOC105167377 [Sesamum indicum]
JMSF052B17Sequence659001144 (7)ref|XP_011085366.1|160PREDICTED: uncharacterized protein LOC105167377 [Sesamum indicum]632001144 (7)ref|XP_011085366.1|160PREDICTED: uncharacterized protein LOC105167377 [Sesamum indicum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF052B17+                                                      ATAAAATATCATTGAGC
JMFN012K04+                                                               CATTGAGC
JMFN007M10+                                                               CATTGAGC
rJMFF033H21-                                                              CATTGAGC
                      ____________________________________________________________
consensus                                                        ATAAAATATCATTGAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052B17-                      AGAGGTACATTTTGGTTTTAGCAGGCATTGCAGATTGAAATCGAAAAG
JMSF052B17+           CTTTTATTAGTAAGAGGTACATTTTGGTTTTAGCAGGCATTGCAGATTGAAATCGAAAAG
JMFN013J07+                      AAGAGGTACATTTTGGTTTTAGCAGGCATTGCAGATTGAAATCGAAAAG
JMFN012K04+           CTTTTATTAGTAAGAGGTACATTTTGGTTTTAGCAGGCATTGCAGATTGAAATCGAAAAG
JMFN007M10+           CTTTTATTAGTAAGAGGTACATTTTGGTTTTAGCAGGCATTGCAGATTGAAATCGAAAAG
rJMFF033H21-          CTTTTATTAGTAAGAGGTACATTTTGGTTTTAGCAGGCATTGCAGATTGAAATCGAAAAG
                      ____________________________________________________________
consensus             CTTTTATTAGTAAGAGGTACATTTTGGTTTTAGCAGGCATTGCAGATTGAAATCGAAAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052B17-          AATGCCAACTAAACCAATGCAGATGCTATCCATAAAAAACTTGTGCAATAATCTTCGACA
JMSF052B17+           AATGCCAACTAAACCAATGCAGATGCTATCCATAAAAAACTTGTGCAATAATCTTCGACA
JMFN013J07+           AATGCCAACTAAACCAATGCAGATGCTATCCATAAAAAACTTGTGCAATAATCTTCGACA
JMFN012K04+           AATGCCAACTAAACCAATGCAGATGCTATCCATAAAAAACTTGTGCAATAATCTTCGACA
JMFN007M10+           AATGCCAACTAAACCAATGCAGATGCTATCCATAAAAAACTTGTGCAATAATCTTCGACA
rJMFF033H21-          AATGCCAACTAAACCAATGCAGATGCTATCCATAAAAAACTTGTGCAATAATCTTCGACA
                      ____________________________________________________________
consensus             AATGCCAACTAAACCAATGCAGATGCTATCCATAAAAAACTTGTGCAATAATCTTCGACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052B17-          TTTAGGGTCCATTAGCTGTCAATTAGCATTGCACATATAAATGGGGAAAGATAAAAACAA
JMSF052B17+           TTTAGGGTCCATTAGCTGTCAATTAGCATTGCACATATAAATGGGGAAAGATAAAAACAA
JMFN013J07+           TTTAGGGTCCATTAGCTGTCAATTAGCATTGCACATATAAATGGGGAAAGATAAAAACAA
JMFN012K04+           TTTAGGGTCCATTAGCTGTCAATTAGCATTGCACATATAAATGGGGAAAGATAAAAACAA
JMFN007M10+           TTTAGGGTCCATTAGCTGTCAATTAGCATTGCACATATAAATGGGGAAAGATAAAAACAA
JMFF033H21+             TAGGGTCCATTAGCTGTCAATTAGCATTGCACATATAAATGGGGAAAGATAAAAACAA
rJMFF033H21-          TTTAGGGTCCATTAGCTGTCAATTAGCATTGCACATATAAATGGGGAAAGATAAAAACAA
                      ____________________________________________________________
consensus             TTTAGGGTCCATTAGCTGTCAATTAGCATTGCACATATAAATGGGGAAAGATAAAAACAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052B17-          TAAATGGCGTCTGAAACAACTGCATTATTACAGGAAAGTTTCCCAATCTGTGGCTCGCAA
JMSF052B17+           TAAATGGCGTCTGAAACAACTGCATTATTACAGGAAAGTTTCCCAATCTGTGGCTCGCAA
JMFN013J07+           TAAATGGCGTCTGAAACAACTGCATTATTACAGGGAAGTTTCCCAATCTGTGGCTCGCAA
JMFN012K04+           TAAATGGCGTCTGAAACAACTGCATTATTACAGGGAAGTTTCCCAATCTGTGGCTCGCAA
JMFN007M10+           TAAATGGCGTCTGAAACAACTGCATTATTACAGGGAAGTTTCCCAATCTGTGGCTCGCAA
JMFF033H21+           TAAATGGCGTCTGAAACAACTGCATTATTACAGGGAAGTTTCCCAATCTGTGGCTCGCAA
rJMFF033H21-          TAAATGGCGTCTGAAACAACTGCATTATTACAGGGAAGTTTCCCAATCTGTGGCTCGCAA
                      ____________________________________________________________
consensus             TAAATGGCGTCTGAAACAACTGCATTATTACAGGGAAGTTTCCCAATCTGTGGCTCGCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052B17-          AATCCCAAACTCACTAATGCATCCCAAGATTCTGGCTTTAATGAGATGCCTGCACCAAAT
JMSF052B17+           AATCCCAAACTCACTAATGCATCCCAAGATTCTGGCTTTAATGAGATGCCTGCACCAAAT
JMFN013J07+           AATCCCAAACTCACTAATGCATCCCAAGATTCTGGCTTTAATGAGATGCCTGCACCAAAT
JMFN012K04+           AATCCCAAACTCACTAATGCATCCCAAGATTCTGGCTTTAATGAGATGCCTGCACCAAAT
JMFN007M10+           AATCCCAAACTCACTAATGCATCCCAAGATTCTGGCTTTAATGAGATGC-----------
JMFF033H21+           AATCCCAAACTCACTAATGCATCCCAAGATTCTGGCTTTAATGAGATGCCTGCACCAAAT
rJMFF033H21-          AATCCCAAACTCACTAATGCATCCCAAGATTCTGGCTTTAATGAGATGCCTGCACCAAAT
                      ____________________________________________________________
consensus             AATCCCAAACTCACTAATGCATCCCAAGATTCTGGCTTTAATGAGATGCCTGCACCAAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052B17-          TCTCTTCCTTATTTTTCTTCCCTCCTGTGAAGAGCTTGTATCCACCATAGAAAACCAAAC
JMSF052B17+           TCTCTTCCTTATTTTTCTTCCCTCCTGTGAAGAGCTTGTATCCACCATAGAAAACCAAAC
JMFN013J07+           TCTCTTCCTTATTTTTCTTCCCTCCTGTGAAGAGCTTGTATCCACCATAGAAAACCAAAC
JMFN012K04+           TCTCTTCCTTATTTTTCTTCCCTCCTGTGAAGAGCTTGTATCCACCATAGAAAACCAAAC
JMFN007M10+           -CTCTTCCTTATTTTTCTTCCCTCCTGTGAAGAGCTTGTATCCACCATAGAAAACCAAAC
JMFF033H21+           TCTCTTCCTTATTTTTCTTCCCTCCTGTGAAGAGCTTGTATCCACCATAGAAAACCAAAC
rJMFF033H21-          TCTCTTCCTTATTTTTCTTCCCTCCTGTGAAGAGCTTGTATCCACCATAGAAAACCAAAC
                      ____________________________________________________________
consensus             TCTCTTCCTTATTTTTCTTCCCTCCTGTGAAGAGCTTGTATCCACCATAGAAAACCAAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052B17-          CCCATCCGGACAAAGAGATAAGTACAAAATGTTCTTCCTTCCATTTAGACGGACTCGTCG
JMSF052B17+           CCCATCCGGACAAAGAGATAAGTACAAAATGTTCTTCCTTCCATTTAGACGGACTCGTCG
JMFN013J07+           CCCATCCGGACAAAGAGATAAGTACAAAATGTTCTTCCTTCCATTTAGACGGACTCGTCG
JMFN012K04+           CCCATCCGGACAAAGAGATAAGTACAAAATGTTCTTCCTTCCATTTAGACGGACTCGTCG
JMFN007M10+           CCCATCCGGACAAAGAGATAAGTACAAAATGTTCTTCCTTCCATTTAGACGGACTCGTCG
JMFF033H21+           CCCATCCGGACAAAGAGATAAGTACAAAATGTTCTTCCTTCCATTTAGACGGACTCGTCG
rJMFF033H21-          CCCATCCGGACAAAGAGATAAGTACAAAATGTTCTTCCTTCCATTTAGACGGACTCGTCG
                      ____________________________________________________________
consensus             CCCATCCGGACAAAGAGATAAGTACAAAATGTTCTTCCTTCCATTTAGACGGACTCGTCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052B17-          GATCTTGCCAAAAATTCACCTTAGGAGGTCCATGGTGATCGGCAGCGCCGGCGAGGCCGC
JMSF052B17+           GATCTTGCCAAAAATTCACCTTAGGAGGTCCATGGTGATCGGCAGCGCCGGCGAGGCCGC
JMFN013J07+           GATCTTGCCAAAAATTCACCTTAGGAGGTCCATGGTGATCGGCAGCGCCGGCGAGGCCGC
JMFN012K04+           GATCTTGCCAAAAATTCACCTTAGGAGGTCCATGGTGATCGGCAGCGCCGGCGAGGCCGC
JMFN007M10+           GATCTTGCCAAAAATTCACCTTAGGAGGTCCATGGTGATCGGCAGCGCCGGCGAGGCCGC
JMFF033H21+           GATCTTGCCAAAAATTCACCTTAGGAGGTCCATGGTGATCGGCAGCGCCGGCGAGGCCGC
rJMFF033H21-          GATCTTGCCAAAAATTCACCTTAGGAGGTCCATGGTGATCGGCAGCGCCGGCGAGGCCGC
                      ____________________________________________________________
consensus             GATCTTGCCAAAAATTCACCTTAGGAGGTCCATGGTGATCGGCAGCGCCGGCGAGGCCGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052B17-          GGCGGGGGACAAACGATGCAGCTTGAGCTGCTGAACCAGACGTCGGAATTCGATTGAAGG
JMSF052B17+           GGCGGGGGACAAACGATGCAGCTTGAGCTGCTGAACCAGACGTCGGAATTCGATTGAAGG
JMFN013J07+           GGCGGGGGACAAACGATGCAGCTTGAGCTGCTGAACCAGACGTCGGAATTCGATTGAAGG
JMFN012K04+           GGCGGGGGACAAACGATGCAGCTTGAGCTGCTGAACCAGACGTCGGAATTCGATTGAAGG
JMFN007M10+           GGCGGGGGACAAACGATGCAGCTTGAGCTGCTGAACCAGACGTCGGAATTCGATTGAAGG
JMFF033H21+           GGCGGGGGACAAACGATGCAGCTTGAGCTGCTGAACCAGACGTCGGAATTCGATTGAAGG
rJMFF033H21-          GGCGGGGGACAAACGATGCAGCTTGAGCTGCTGAACCAGACGTCGGAATTCGATTGAAGG
                      ____________________________________________________________
consensus             GGCGGGGGACAAACGATGCAGCTTGAGCTGCTGAACCAGACGTCGGAATTCGATTGAAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052B17-          CAGCGGCTCGACGAGCCGTCATCATTGCCAACGAAGTAGCCATGGCGTCGCGATTGCTCT
JMSF052B17+           CAGCGGCTCGACGAGCCGTCATCATTGCCAACGAAGTAGCCATGGCGTCGCGATTGCTCT
JMFN013J07+           CAGCGGCTCGACGAGCCGTCATCATTGCCAACGAAGTAGCCATGGCGTCGCGATTGCTCT
JMFN012K04+           CAGCGGCTCGACGAGCCGTCATCATTGCCAACGAAGTAGCCATGGCGTCGCGATTGCTCT
JMFN007M10+           CAGCGGCTCGACGAGCCGTCATCATTGCCAACGAAGTAGCCATGGCGTCACGATTGCTCT
JMFF033H21+           CAGCGGCTCGACGAGCCGTCATCATTGCCAACGAAGTAGCCATGGCGTCGCGATTGCTCT
rJMFF033H21-          CAGCGGCTCGACGAGCCGTCATCATTGCCAACGAAGTAGCCATGGCGTCGCGATTGCTCT
                      ____________________________________________________________
consensus             CAGCGGCTCGACGAGCCGTCATCATTGCCAACGAAGTAGCCATGGCGTCGCGATTGCTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF052B17-          CTCAGAGACTCGGCGATGGGAACTGTACGGAAAGACCGCGT                   
JMSF052B17+           CTCAGAGACTCGGCGATGGGAACTGTACGGAAAGACCGCGT                   
JMFN013J07+           CTCAGAGACTCGGCGATGGGAACTGTACGGAAAGACCG                      
JMFN012K04+           CTCAGAGACTCGGCGAT                                           
JMFN007M10+           CTCAGAGACTCGGCGATGGGAACTGTA                                 
JMFF033H21+           CTCAGAGACTCGGCGATGGGAACTGTACGGAAAGACCGCGTAGATGGAAAATGGG     
rJMFF033H21-          CTCAGAGACTCGGCGATGGGAACTGTACGGAAAGACCGCGTAGATGGAAAATGGGGAAAT
                      ____________________________________________________________
consensus             CTCAGAGACTCGGCGATGGGAACTGTACGGAAAGACCGCGTAGATGGAAAATGGGGAAAT