Contig 001143:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026N07Sequence496003538 (6)gb|EYU22365.1|9e-68hypothetical protein MIMGU_mgv1a0228112mg, partial [Erythranthe guttata]763001143 (6)ref|XP_009630232.1|147PREDICTED: serine/threonine-protein kinase rio2 [Nicotiana tomentosiformis] ref|
JMFF033A15Sequence616003538 (6)gb|EYU22365.1|5e-95hypothetical protein MIMGU_mgv1a0228112mg, partial [Erythranthe guttata]711001143 (6)ref|XP_009630232.1|137PREDICTED: serine/threonine-protein kinase rio2 [Nicotiana tomentosiformis] ref|
JMSF004I07Sequence321003538 (6)gb|EYU22365.1|3e-23hypothetical protein MIMGU_mgv1a0228112mg, partial [Erythranthe guttata]264001143 (6)emb|CDP19085.1|3e-09unnamed protein product [Coffea canephora]
JMSF005J23Sequence282003538 (6)gb|EYU22365.1|4e-22hypothetical protein MIMGU_mgv1a0228112mg, partial [Erythranthe guttata]385001143 (6)emb|CDP19085.1|3e-17unnamed protein product [Coffea canephora]
JMSF033M11Sequence676003538 (6)ref|XP_002533337.1|1e-147serine/threonine-protein kinase rio2, putative [Ricinus communis] gb|EEF29046.1|740001143 (6)ref|XP_009630232.1|147PREDICTED: serine/threonine-protein kinase rio2 [Nicotiana tomentosiformis] ref|
JMSF039H01Sequence700003538 (6)ref|XP_002533337.1|3e-113serine/threonine-protein kinase rio2, putative [Ricinus communis] gb|EEF29046.1|720001143 (6)ref|XP_009630232.1|147PREDICTED: serine/threonine-protein kinase rio2 [Nicotiana tomentosiformis] ref|

Alignment

This contig is upended


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rJMFF026N07+                                                                     T
                      ____________________________________________________________
consensus                                                                        T
 
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rJMSF033M11+               AAACCCAGATGATTCTGATGATTCAGAGGCAGAGTTGGAAGATGGTGTACGACCT
rJMSF039H01+               AAACCCAGATGATTCTGATGATTCAGAGGCAGAGTTGGAAGATGGTGTACGACCT
rJMFF026N07+          GAAGAAAACCCAGATGATTCTGATGATTCAGAGGCAGAGTTGGAAGATGGTGTACGACCT
                      ____________________________________________________________
consensus             GAAGAAAACCCAGATGATTCTGATGATTCAGAGGCAGAGTTGGAAGATGGTGTACGACCT
 
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rJMSF033M11+          GAATTTTCTGACATAAAGAAAAATTCTGGTTTCCTAGACAAGGAACTTGCTGCTAGTGGT
rJMSF039H01+          GAATTTTCTGACATAAAGAAAAATTCTGGTTTCCTAGACAAGGAACTTGCTGCTAGTGGT
rJMFF026N07+          GAATTTTCTGACATAAAGAAAAATTCTGGTTTCCTAGACAAGGAACTTGCTGCTAGTGGT
rJMFF033A15+                 CTGACATAAAGAAAAATTCTGGTTTCCTAGACAAGGAACTTGCTGCTAGTGGT
                      ____________________________________________________________
consensus             GAATTTTCTGACATAAAGAAAAATTCTGGTTTCCTAGACAAGGAACTTGCTGCTAGTGGT
 
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rJMSF033M11+          TTTACTAGGAAGGATCAAGACGATATTGAGAAGTTTATTGAAGTTGAAATCGAGGACTCA
rJMSF039H01+          TTTACTAGGAAGGATCAAGACGATATTGAGAAGTTTATTGAAGTTGAAATCGAGGACTCA
rJMFF026N07+          TTTACTAGGAAGGATCAAGACGATATTGAGAAGTTTATTGAAGTTGAAATCGAGGACTCA
rJMFF033A15+          TTTACTAGGAAGGATCAAGACGATATTGAGAAGTTTATTGAAGTTGAAATCGAGGACTCA
                      ____________________________________________________________
consensus             TTTACTAGGAAGGATCAAGACGATATTGAGAAGTTTATTGAAGTTGAAATCGAGGACTCA
 
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rJMSF033M11+          GTTACAGATGATGAAGGAAATGATAACATGGATGAAACAGAAGTAAAGCATTTTGAATCC
rJMSF039H01+          GTTACAGATGATGAAGGAAATGATAACATGGATGAAACAGAAGTAAAGCATTTTGAATCC
rJMFF026N07+          GTTACAGATGATGAAGGAAATGATAACATGGATGAAACAGAAGTAAAGCATTTTGAATCC
rJMFF033A15+          GTTACAGATGATGAAGGAAATGATAACATGGATGAAACAGAAGTAAAGCATTTTGAATCC
                      ____________________________________________________________
consensus             GTTACAGATGATGAAGGAAATGATAACATGGATGAAACAGAAGTAAAGCATTTTGAATCC
 
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rJMSF033M11+          TTGCAACTAGATGAGAAGGAAGAAGATGGTAAAAATGAAGATGAGAAAAGCACGAAGAAT
rJMSF039H01+          TTGCAACTAGATGAGAAGGAAGAAGATGGTAAAAATGAAGATGAGAAAAGCACGAAGAAT
rJMFF026N07+          TTGCAACTAGATGAGAAGGAAGAAGATGGTAAAAATGAAGATGAGAAAAGCACGAAGAAT
rJMFF033A15+          TTGCAACTAGATGAGAAGGAAGAAGATGGTAAAAATGAAGATGAGAAAAGCACGAAGAAT
                      ____________________________________________________________
consensus             TTGCAACTAGATGAGAAGGAAGAAGATGGTAAAAATGAAGATGAGAAAAGCACGAAGAAT
 
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rJMSF033M11+          GATAGAAAAGTAGAGACTGAAGATAATTCTGAGGATGATAACCAAGTTGCAGATGAACAT
rJMSF039H01+          GATAGAAAAGTAGAGACTGAAGATAATTCTGAGGATGATAACCAAGTTGCAGATGAACAT
rJMFF026N07+          GATAGAAAAGTAGAGACTGAAGATAATTCTGAGGATGATAACCAAGTTGCAGATGAACAT
rJMSF005J23+                          CTGAAGATAATTCTGAGGATGATAACCAAGTTGCAGATGNACAT
rJMFF033A15+          GATAGAAAAGTAGAGACTGAAGATAATTCTGAGGATGATAACCAAGTTGCAGATGAACAT
                      ____________________________________________________________
consensus             GATAGAAAAGTAGAGACTGAAGATAATTCTGAGGATGATAACCAAGTTGCAGATGAACAT
 
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rJMSF033M11+          GGGTTGGAGGACGGGGAACAGATTGAAGATGAAGATGAAGATGATCCTGAACTGGTGAAG
rJMSF039H01+          GGGTTGGAGGACGGGGAACAGATTGAAGATGAAGATGAAGATGATCCTGAACTGGTGAAG
rJMFF026N07+          GGGTTGGAGGACGGGGAACAGATTGAAGATGAAGATGAAGATGATCCTGAACTGGTGAAG
rJMSF005J23+          GGGTTGGAGGACGGGGAACAGATNGAAGATGAAGATGAAGATGATCCTGAACTGGTGAAG
rJMFF033A15+          GGGTTGGAGGACGGGGAACAGATTGAAGATGAAGATGAAGATGATCCTGAACTGGTGAAG
                      ____________________________________________________________
consensus             GGGTTGGAGGACGGGGAACAGATTGAAGATGAAGATGAAGATGATCCTGAACTGGTGAAG
 
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rJMSF033M11+          CGCCTGAATAAGCAACGTAGACGGGCCGTTAAAGCAGCCCATGGTGGAAGGAGGAATTTA
rJMSF039H01+          CGCCTGAATAAGCAACGTAGACGGGCCGTTAAAGCAGCCCATGGTGGAAGGAGGAATTTA
rJMFF026N07+          CGCCTGAATAAGCAACGTAGACGGGCCGTTAAAGCAGCCCATGGTGGAAGGAGGAATTTA
rJMSF005J23+          CGCCTGAATAAGCAACGTAGACGGGCCGTTAAAGCAGCCCATGGTGGAAGGAGGAATTTA
rJMSF004I07+                                                    GGTGGAAGGNGGAATTTA
rJMFF033A15+          CGCCTGAATAAGCAACGTAGACGGGCCGTTAAAGCAGCCCATGGTGGAAGGAGGAATTTA
                      ____________________________________________________________
consensus             CGCCTGAATAAGCAACGTAGACGGGCCGTTAAAGCAGCCCATGGTGGAAGGAGGAATTTA
 
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rJMSF033M11+          ACTTCCAGGAATACATACAAAGACAAAGGTGGTAGATCCTCACACAACTCAAAGATCCAG
rJMSF039H01+          ACTTCCAGGAATACATACAAAGACAAAGGTGGTAGATCCTCACACAACTCAAAGATCCAG
rJMFF026N07+          ACTTCCAGGAATACATACAAAGACAAAGGTGGTAGATCCTCACACAACTCAAAGATCCAG
rJMSF005J23+          ACTTCCAGGAATACATACAAAGACAAAGGTGGTAGATCCTCACACAACTCAAAGATCCAG
rJMSF004I07+          ACTTCCAGGAATACATACAAAGACAAAGGTGGTAGATCCTCACACAACTCAAAGATCCAG
rJMFF033A15+          ACTTCCAGGAATACATACAAAGACAAAGGTGGTAGATCCTCACACAACTCAAAGATCCAG
                      ____________________________________________________________
consensus             ACTTCCAGGAATACATACAAAGACAAAGGTGGTAGATCCTCACACAACTCAAAGATCCAG
 
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rJMSF033M11+          AAGCAATTGAGTAATTGGTAAATCATGAAAAAGACCCAACAAAACACACTCCCAAAAGAA
rJMSF039H01+          AAGCAATTGAGTAATTGGTAAATCATGAAAAAGACCCAACAAAACACACTCCCAAAAGAA
rJMFF026N07+          AAGCAATTGAGTAATTGGTAAATCATGAAAAAGACCCAACAAAACACACTCCCAAAAGAA
rJMSF005J23+          AAGCANTTGAGTAATTGGTAAATCATGAAAAAGACCCAACAAAACACACTCCCAAAAGAA
rJMSF004I07+          AAGCAATTGAGTAATTGGTAAATCATGAAAAAGACCCAACAAAACACACTCCCAAAAGAA
rJMFF033A15+          AAGCAATTGAGTAATTGGTAAATCATGAAAAAGACCCAACAAAACACACTCCCAAAAGAA
                      ____________________________________________________________
consensus             AAGCAATTGAGTAATTGGTAAATCATGAAAAAGACCCAACAAAACACACTCCCAAAAGAA
 
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rJMSF033M11+          AACCTGAGGAGCGTGGCAAAGTGGTAATGCTGCAGAGGGACCACACC--ATGTAATTTTA
rJMSF039H01+          AACCTGAGGAGCGTGGCAAAGTGGTAATGCTGCAGAGGGACCACACC--ATGTAATTTTA
rJMFF026N07+          AACCTGAGGAGCGTGGCAAAGTGGTAATGCTGCAGAGGGACCACACC--ATGTAATTTTA
rJMSF005J23+          AACCTGCGGAGCGTGGCAAAGTGGTAATGCTGCAGAGGGACCNCAGCCACTGTAATTTTA
rJMSF004I07+          AACCTGAGGAGCGTGGCAAAGTGGTAATGCTGCAGAGGGACCACACC--ATGTAATTTTA
rJMFF033A15+          AACCTGAGGAGCGTGGCAAAGTGGTAATGCTGCAGAGGGACCACACC--ATGTAATTTTA
                      ____________________________________________________________
consensus             AACCTGAGGAGCGTGGCAAAGTGGTAATGCTGCAGAGGGACCACACC--ATGTAATTTTA
 
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rJMSF033M11+          AATCTGTTTTCTTGGTGTTCACAATTTTGTAGCCTGTACTCTACTGTGTTAGCTAAATTG
rJMSF039H01+          AATCTGTTTTCTTGGTGTTCACAATTTTGTAGCCTGTACTCTA                 
rJMFF026N07+          AATCTGTTTTCTTGGTGTTCACAATTTTGTAGCCTGTACTCTACTGTGTTAGCTAAATTG
rJMSF005J23+          AATCTGTTTTCTTGGTGTTCACAATTTTGTAGCCTGTAC                     
rJMSF004I07+          AATCTGTTTTCTTGGTGTTCACAATTTTGTAGCCTGTACT                    
rJMFF033A15+          AATCTGTTTTCTTGGTGTTCACAATTTTGTAGCCTGTACTCTACTGTGTTAGCTAAATTG
                      ____________________________________________________________
consensus             AATCTGTTTTCTTGGTGTTCACAATTTTGTAGCCTGTACTCTACTGTGTTAGCTAAATTG
 
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rJMSF033M11+          GTAAAACTTCCTAC                                              
rJMFF026N07+          GTAAAACTTCCTACACATTGTTGTGCAGTGTTTCTCATTAATAT                
rJMFF033A15+          GTAAAACTTCCTACACATTGTTGTGCAGTGTTTCTCATTAATATATTATACTATTTAAAC
                      ____________________________________________________________
consensus             GTAAAACTTCCTACACATTGTTGTGCAGTGTTTCTCATTAATATATTATACTATTTAAAC