Contig 001141:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF032K07Sequence472003214 (3)ref|XP_008811889.1|4e-38PREDICTED: dnaJ homolog subfamily B member 13-like [Phoenix dactylifera]657001141 (2)ref|XP_007025544.1|3e-93DNAJ heat shock family protein [Theobroma cacao] gb|EOY28166.1| DNAJ heat shock
JMSF013N14Sequence246003214 (3)ref|XP_007026692.1|1e-09DnaJ subfamily B member 1 isoform 3 [Theobroma cacao] gb|EOY07194.1| DnaJ subfam734001141 (2)emb|CBI30610.3|2e-115unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013N14+                              CGTTGGGGATAGCAGACCAATGAGTTCAGGGCCCCGGAAA
                      ____________________________________________________________
consensus                                 CGTTGGGGATAGCAGACCAATGAGTTCAGGGCCCCGGAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013N14+          GCACCGCCAATTGAAAGAAAGTTGCCTTGTAGCCTAGAGGAACTCTACAAGGGAACCACC
                      ____________________________________________________________
consensus             GCACCGCCAATTGAAAGAAAGTTGCCTTGTAGCCTAGAGGAACTCTACAAGGGAACCACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013N14+          AAAAAGATGAAAATCTCGAGGGAGATAGTTGATGCAAGTGGGGCCACAATGGTGGTAGAA
rJMFF032K07+             AAGATGAAAATCTCGAGGGAGATAGTTGATGCAAGTGGGGCCACAATGGTGGTAGAA
                      ____________________________________________________________
consensus             AAAAAGATGAAAATCTCGAGGGAGATAGTTGATGCAAGTGGGGCCACAATGGTGGTAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013N14+          GAGATTTTAACCATCACAATCAAACCCGGTTGGAAGAAGGGAACCAAAATCACATTCCCG
rJMFF032K07+          GAGATTTTAACCATCACAATCAAACCCGGTTGGAAGAAGGGAACCAAAATCACATTCCCG
                      ____________________________________________________________
consensus             GAGATTTTAACCATCACAATCAAACCCGGTTGGAAGAAGGGAACCAAAATCACATTCCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013N14+          GAGAAAGGGAACGAAGAGCCAAATGTCATTCCCGCAGATCTTGTATTCATAGTTGACGAG
rJMFF032K07+          GAGAAAGGGAACGAAGAGCCAAATGTCATTCCCGCAGATCTTGTATTCATAGTTGACGAG
                      ____________________________________________________________
consensus             GAGAAAGGGAACGAAGAGCCAAATGTCATTCCCGCAGATCTTGTATTCATAGTTGACGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013N14+          AAACCACATAGCACGTTTACGAGAGAAGGCAATGATCTCATCGTCGTACAGAAAGTATCG
rJMFF032K07+          AAACCACATAGCACGTTTACGAGAGAAGGCAATGATCTCATCGTCGTACAGAAAGTATCG
                      ____________________________________________________________
consensus             AAACCACATAGCACGTTTACGAGAGAAGGCAATGATCTCATCGTCGTACAGAAAGTATCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013N14+          CTCGCTGAAGCGTTAGCAGGCTATACAGTCCATTTGACGACGCTGGATGGAAGAAACTTA
rJMFF032K07+          CTCGCTGAAGCGTTAGCAGGCTATACAGTCCATTTGACGACGCTGGATGGAAGAAACTTA
                      ____________________________________________________________
consensus             CTCGCTGAAGCGTTAGCAGGCTATACAGTCCATTTGACGACGCTGGATGGAAGAAACTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013N14+          ACAGTGCCTATCAACAGCGTCATACACCCGAATTATGAAGAGGTGGTGGCGAGAGAAGGG
rJMFF032K07+          ACAGTGCCTATCAACAGCGTCATACACCCGAATTATGAAGAGGTGGTGGCGAGAGAAGGG
                      ____________________________________________________________
consensus             ACAGTGCCTATCAACAGCGTCATACACCCGAATTATGAAGAGGTGGTGGCGAGAGAAGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013N14+          ATGCCGATACCTAAAGAGCCCTCAAAAAGAGGCAATTTGAGGATCAAGTTCAACATCAAA
rJMFF032K07+          ATGCCGATACCTAAAGAGCCCTCAAAAAGAGGCAATTTGAGGATCAAGTTCAACATCAAA
                      ____________________________________________________________
consensus             ATGCCGATACCTAAAGAGCCCTCAAAAAGAGGCAATTTGAGGATCAAGTTCAACATCAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013N14+          TTCCCAACTAGATTGACATCAGAGCAGAAGACTGGAGTGAAGAAATTGCTTGCTTCCTGA
rJMFF032K07+          TTCCCAACTAGATTGACATCAGAGCAGAAGACTGGAGTGAAGAAATTGCTTGCTTCCTGA
                      ____________________________________________________________
consensus             TTCCCAACTAGATTGACATCAGAGCAGAAGACTGGAGTGAAGAAATTGCTTGCTTCCTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013N14+          GAAGATAACATCTCTTCCCCCTGTTTTCCCCAGTTGAAGCTCCTCTTGATGCTTTCAAGT
rJMFF032K07+          GAAGATAACATCTCTTCCCCCTGTTTTCCCCAGTTGAAGCTCCTCTTGATGCTTTCAAGT
                      ____________________________________________________________
consensus             GAAGATAACATCTCTTCCCCCTGTTTTCCCCAGTTGAAGCTCCTCTTGATGCTTTCAAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013N14+          TCCATTATATGCACTTGTCCTTGCAAAATTTGCTTGCAATCTGTGTGGAATTATATCAAT
rJMFF032K07+          TCCATTATATGCACTTGTCCTTGCAAAATTTGCTTGCAATCTGTGTGGAATTATATCAAT
                      ____________________________________________________________
consensus             TCCATTATATGCACTTGTCCTTGCAAAATTTGCTTGCAATCTGTGTGGAATTATATCAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013N14+          GGAGAGTTTTAGATTTCAATCAAAGATTATATAA                          
rJMFF032K07+          GGAGAGTTTTAGATTTCAATCAAAGATTATATAAGTTAATATCTGTACAGTTTATATAGA
                      ____________________________________________________________
consensus             GGAGAGTTTTAGATTTCAATCAAAGATTATATAAGTTAATATCTGTACAGTTTATATAGA