Contig 001126:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF028D22Sequence580018443ref|XP_011086593.1|5e-88PREDICTED: signal recognition particle receptor subunit beta-like [Sesamum indi740001126 (2)ref|XP_009598790.1|1e-50PREDICTED: signal recognition particle receptor subunit beta-like [Nicotiana to
JMSF032H16Sequence707009427 (4)ref|XP_011075882.1|4e-07PREDICTED: uncharacterized protein LOC105160266 isoform X3 [Sesamum indicum]710001126 (2)ref|XP_009598790.1|5e-53PREDICTED: signal recognition particle receptor subunit beta-like [Nicotiana to

Alignment

This contig is upended


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rJMSF032H16+                                                                TTTTAC
rJMFF028D22+                                                  TGGATGCTGTAGAATTTTAC
                      ____________________________________________________________
consensus                                                     TGGATGCTGTAGAATTTTAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF032H16+          CCAACTGCCGTGCTGCTTCAGAGTACCTTTATGATATTTTGACCAAGGTGACTGTGGTCA
rJMFF028D22+          CCAACTGCCGTGCTGCTTCAGAGTACCTTTATGATATTTTGACCAAGGTGACTGTGGTCA
                      ____________________________________________________________
consensus             CCAACTGCCGTGCTGCTTCAGAGTACCTTTATGATATTTTGACCAAGGTGACTGTGGTCA
 
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rJMSF032H16+          AGAAGAAGATTCCAGTACTACTACTCTGCAACAAAGTGGATAAAGTTACTGCACATACAA
rJMFF028D22+          AGAAGAAGATTCCAGTACTACTACTCTGCAACAAAGTGGATAAAGTTACTGCACATACAA
                      ____________________________________________________________
consensus             AGAAGAAGATTCCAGTACTACTACTCTGCAACAAAGTGGATAAAGTTACTGCACATACAA
 
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rJMSF032H16+          AGGAGTTCATAAAAAAGCAGCTTGAAAAGGAAATTGACAAGCTTCGTGCTTCAAGAACTG
rJMFF028D22+          AGGAGTTCATAAAAAAGCAGCTTGAAAAGGAAATTGACAAGCTTCGTGCTTCAAGAACTG
                      ____________________________________________________________
consensus             AGGAGTTCATAAAAAAGCAGCTTGAAAAGGAAATTGACAAGCTTCGTGCTTCAAGAACTG
 
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rJMSF032H16+          CTGTATCCGACGCAGATATCTCAGACGAAATTACACTAGGGACACCTGGAGAAGCGTTCT
rJMFF028D22+          CTGTATCCGACGCAGATATCTCAGACGAAATTACACTAGGGACACCTGGAGAAGCGTTCT
                      ____________________________________________________________
consensus             CTGTATCCGACGCAGATATCTCAGACGAAATTACACTAGGGACACCTGGAGAAGCGTTCT
 
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rJMSF032H16+          CGTTTTCACAGTGCGAAAACCAGGTAGTAGTTGGAGAAGCTTCCGGTTTGACAGGAGAAA
rJMFF028D22+          CGTTTTCACAGTGCGAAAACCAGGTAGTAGTTGGAGAAGCTTCCGGTTTGACAGGAGAAA
                      ____________________________________________________________
consensus             CGTTTTCACAGTGCGAAAACCAGGTAGTAGTTGGAGAAGCTTCCGGTTTGACAGGAGAAA
 
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rJMSF032H16+          TCTCTCAGCTAGAGCAGTTTATTAGGGAGAACGTGAAGCCTTAAACTGGTGGAGCAAGTT
rJMFF028D22+          TCTCTCAGCTAGAGCAGTTTATTAGGGAGAACGTGAAGCCTTAAACTGGTGGAGCAAGTT
                      ____________________________________________________________
consensus             TCTCTCAGCTAGAGCAGTTTATTAGGGAGAACGTGAAGCCTTAAACTGGTGGAGCAAGTT
 
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rJMSF032H16+          GAGCCACCCTTTCTGATATGAAGATGAACCAAGAGAGTATATGGAGATGCTGATGTATTA
rJMFF028D22+          GAGCCACCCTTTCTGATATGAAGATGAACCAAGAGAGTATATGGAGATGCTGATGTATTA
                      ____________________________________________________________
consensus             GAGCCACCCTTTCTGATATGAAGATGAACCAAGAGAGTATATGGAGATGCTGATGTATTA
 
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rJMSF032H16+          CAAGTTTTGTTGATGAGATAATTGGAAATTTGCGGTGATTTTGAACAGACTTTGGTTTTT
rJMFF028D22+          CAAGTTTTGTTGATGAGATAATTGGAAATTTGCGGTGATTTTGAACAGACTTTGGTTTTT
                      ____________________________________________________________
consensus             CAAGTTTTGTTGATGAGATAATTGGAAATTTGCGGTGATTTTGAACAGACTTTGGTTTTT
 
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rJMSF032H16+          CTTGATGCCTTCTCTCATTGTTGTTACTTCCCAAGTAAATCAAGACATCCTTGATCAACC
rJMFF028D22+          CTTGATGCCTTCTCTCATTGTTGTTACTTCCCAAGTAAATCAAGACATCCTTGATCAACC
                      ____________________________________________________________
consensus             CTTGATGCCTTCTCTCATTGTTGTTACTTCCCAAGTAAATCAAGACATCCTTGATCAACC
 
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rJMSF032H16+          CTAACCAAATTGGTCAAATAGACGATCAGATTATTAATTTGGTAATCACAATGTTACAAT
rJMFF028D22+          CTAACCAAATTGGTCAAATAGACGATCAGACTATTAATTTGGTAATCACAATGTTACAAT
                      ____________________________________________________________
consensus             CTAACCAAATTGGTCAAATAGACGATCAGATTATTAATTTGGTAATCACAATGTTACAAT
 
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rJMSF032H16+          TGGTCTTATTTGCTTCACCCTTAATAGTAGTGGTCTATGGGTCTTATTTGCTTGACAAGT
rJMFF028D22+          TGGTCTTATTTGCTTCACCCTTAATAGTAGTGGTCTATGGGTCTTATTTGCTTGACAAGT
                      ____________________________________________________________
consensus             TGGTCTTATTTGCTTCACCCTTAATAGTAGTGGTCTATGGGTCTTATTTGCTTGACAAGT
 
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rJMSF032H16+          TTCCTTGTANCCCAGAAGACAGTACACTGGCATGG                         
rJMFF028D22+          TTCCTTGTAACCCAGAAGACAGTACACTGGCATGGTCAATTATCAAACNGAAAATACTAT
                      ____________________________________________________________
consensus             TTCCTTGTAACCCAGAAGACAGTACACTGGCATGGTCAATTATCAAACNGAAAATACTAT