Contig 001121:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF009G11+              TCGATATGATGCTCTTGGAGATGGACAAGATAATNCGATNGGATTAGAAAATCGGT
                      ____________________________________________________________
consensus                 TCGATATGATGCTCTTGGAGATGGACAAGATAATNCGATNGGATTAGAAAATCGGT
 
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rJMSF009G11+          NCAAGCTCGAGGCACGATTGAGAAANTTAGAAGGCAGAGAACTTGGCCGTCTATCAGGNT
                      ____________________________________________________________
consensus             NCAAGCTCGAGGCACGATTGAGAAANTTAGAAGGCAGAGAACTTGGCCGTCTATCAGGNT
 
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rJMSF009G11+          CAGCTAAAGGCAATCCTAAGATTGAAGTCTATGATAAGGACTGCAAAAAAGGCTCTGGGG
                      ____________________________________________________________
consensus             CAGCTAAAGGCAATCCTAAGATTGAAGTCTATGATAAGGACTGCAAAAAAGGCTCTGGGG
 
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rJMSF009G11+          GGTTGATTACTCCAGCTAAGACTTACAATCCTTCGGCTGATTCNGTTCTTGGGCATACCG
                      ____________________________________________________________
consensus             GGTTGATTACTCCAGCTAAGACTTACAATCCTTCGGCTGATTCNGTTCTTGGGCATACCG
 
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rJMSF009G11+          AGCCANCTNCCAATGNGGAGGATAAGATGGAAGTAGAGACGAGGCTAGACGAAGTAGCTG
                      ____________________________________________________________
consensus             AGCCANCTNCCAATGNGGAGGATAAGATGGAAGTAGAGACGAGGCTAGACGAAGTAGCTG
 
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rJMSF009G11+          AAGCAGTTGAGGCTCCCGCTAATGAAGAGAGCAAGANGAAGAAGAAGAAAAAGAAGGAAA
rJMFF026F13+                               ATGAAGNGAGCNAGAAGAAGAAGAAGAAAAAGAAGGNAA
                      ____________________________________________________________
consensus             AAGCAGTTGAGGCTCCCGCTAATGAAGAGAGCAAGAAGAAGAAGAAGAAAAAGAAGGAAA
 
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rJMSF009G11+          CAGCTGTTGAAGAGGACGCTGGTGAACCCGAGAACGAAGAGGTAGGGAGGAAGGAGNAGA
rJMFF036N18+                               GTGAACCCGAGAACGAAGAGGTNGGGNGGAAGGNGAAGA
rJMFF026F13+          CNGCTGTTGAAGAGGNCNCTGGTGAACCCGAGAACGAAGAGGTNGGGAGGAAGGNGAAGA
                      ____________________________________________________________
consensus             CAGCTGTTGAAGAGGACGCTGGTGAACCCGAGAACGAAGAGGTAGGGAGGAAGGAGAAGA
 
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rJMSF009G11+          AAAAGAAANANCATTCANCCGAGGGGGGTGAAGGGCAGAATAGTGAAGAAAATGCTGAAA
rJMFF036N18+          AAAAAAAAAAGCATTCAGCCGAGGGGGGTGAAGGGCAGAATAGTGAAGAAAATGCTGAAA
rJMFF026F13+          AAAAAAAAAAGCATTCAGCCGAGGGGGGTGAAGGGCAGAATAGTGAAGAAAATGCTGAAA
                      ____________________________________________________________
consensus             AAAAAAAAAAGCATTCAGCCGAGGGGGGTGAAGGGCAGAATAGTGAAGAAAATGCTGAAA
 
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rJMSF009G11+          CTGGNGAGAAGNAGAAAAAGAAGAGAAAGCATGCCGAGGCTGAAGAAGAAGAAGAGGAAA
rJMFF036N18+          CTGGAGAGAAGAAGAAAAAGAAGAGAAAGCATGCCGAGGCTGAAGAAGAAGAAGAGGAAA
rJMFF026F13+          CTGGAGAGAAGAAGAAAAAGAAGAGAAAGCATGCCGAGGCTGAAGAAGAAGAAGAGGAAA
                      ____________________________________________________________
consensus             CTGGAGAGAAGAAGAAAAAGAAGAGAAAGCATGCCGAGGCTGAAGAAGAAGAAGAGGAAA
 
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rJMSF009G11+          CTGACTCGACCAAGAAGAAAGACAAGAAGAAGAAGAAGAAGAAACTCTGCGGATTGATTG
rJMFF036N18+          CTGAATCGACCAAGAAGAAAGACAAGAAGAAGAAGAAGAAAA----CTGCGGATTGATTG
rJMFF026F13+          CTGAATCGACCAAGAAGAAAGACAAGAAGAAGAAGAAGAAAA----CTGCGGATTGATTG
                      ____________________________________________________________
consensus             CTGAATCGACCAAGAAGAAAGACAAGAAGAAGAAGAAGAAAA----CTGCGGATTGATTG
 
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rJMSF009G11+          TCACATTAAAATGTGTACACAATTTTGGTATGTACTGGCCTTGTTTTAGTGTTTGAAAAT
rJMFF036N18+          TCACATTAAAATGTGTACACAATTTTGGTATGTACTGGCCTTGTTTTAGTGTTTGAAAAT
rJMFF026F13+          TCACATTAAAATGTGTACACAATTTTGGTATGTACTGGCCTTGTTTTAGTGTTTGAAAAT
                      ____________________________________________________________
consensus             TCACATTAAAATGTGTACACAATTTTGGTATGTACTGGCCTTGTTTTAGTGTTTGAAAAT
 
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rJMSF009G11+          CTTGTCATGTTTTCCAAGCCCCTATGACTTCTACAGAAATAT                  
rJMFF036N18+          CTTGTCATGTTTTCCAAGCCCCTATGACTTCTACAGAAATATTGTATTTTCAACTCAAT 
rJMFF026F13+          CTTGTCATGTTTTCCAAGCCCCTATGACTTCTACAGAAATATTGTATTTTCAACTCAATG
                      ____________________________________________________________
consensus             CTTGTCATGTTTTCCAAGCCCCTATGACTTCTACAGAAATATTGTATTTTCAACTCAATG