| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003J01 | Sequence | 466 | 001119 (9) | gb|KJB08787.1| | 1e-46 | hypothetical protein B456_001G103700 [Gossypium raimondii] | 697 | 001119 (9) | ref|XP_009349108.1| | 3e-63 | PREDICTED: putative quinone-oxidoreductase homolog, chloroplastic isoform X1 [P |
| JMFF013G12 | Sequence | 566 | 016264 | ref|XP_008372529.1| | 1e-28 | PREDICTED: putative quinone-oxidoreductase homolog, chloroplastic [Malus domest | 754 | 001119 (9) | ref|XP_002537148.1| | 4e-82 | Quinone oxidoreductase, putative [Ricinus communis] gb|EEF25235.1| Quinone oxido |
| JMFF025O03 | Sequence | 605 | 001119 (9) | ref|XP_007201811.1| | 2e-73 | hypothetical protein PRUPE_ppa008401mg [Prunus persica] gb|EMJ03010.1| hypotheti | 706 | 001119 (9) | gb|KDP45286.1| | 5e-57 | hypothetical protein JCGZ_15151 [Jatropha curcas] |
| JMFF033E17 | Sequence | 561 | 001119 (9) | ref|XP_007201811.1| | 6e-59 | hypothetical protein PRUPE_ppa008401mg [Prunus persica] gb|EMJ03010.1| hypotheti | 754 | 001119 (9) | ref|XP_002537148.1| | 4e-82 | Quinone oxidoreductase, putative [Ricinus communis] gb|EEF25235.1| Quinone oxido |
| JMSF022D01 | Sequence | 623 | 001119 (9) | ref|XP_007201811.1| | 7e-67 | hypothetical protein PRUPE_ppa008401mg [Prunus persica] gb|EMJ03010.1| hypotheti | 752 | 001119 (9) | ref|XP_008244672.1| | 2e-117 | PREDICTED: putative quinone-oxidoreductase homolog, chloroplastic [Prunus mume] |
This contig is upended
. : . : . : . : . : . :
JMFF033E17- GGCTTTG
JMSF022D01- GGATTCATTTCATTTCATACTGTCCGGCTTTG
____________________________________________________________
consensus GGATTCATTTCATTTCATACTGTCCGGCTTTG
. : . : . : . : . : . :
JMFF033E17- CAGATTTGCATTCTTCAACTACTTGTTAAAGAGGTGAGAGCTTTTCGGTTCGAGTATGGC
JMFF003J01- ATTCTTCAACTACTTGTTAAAGAGGTGAGAGCTTTTCGGTTCGAGTATGGC
JMSF022D01- CAGATTTGCATTCTTCAACTACTTGTTAAAGAGGTGAGAGCTTTTCGGTTCGAGTATGGC
JMFF025O03- ATTCTTCAACTACTTGTTAAAGAGGTGAGAGCTTTTCGGTTCGAGTATGGC
____________________________________________________________
consensus CAGATTTGCATTCTTCAACTACTTGTTAAAGAGGTGAGAGCTTTTCGGTTCGAGTATGGC
. : . : . : . : . : . :
JMFF033E17- TGCCGCCGGGAGGCTTATGCACGCGGTGCAGTACGACAGCTACGGCGGAGGAGCCGCAGC
JMFF003J01- TGCCGCCGGGAGGCTTATGCACGCGGTGCAGTACGACAGCTACGGCGGAGGAGCCGCAGC
JMSF022D01- TGCCGCCGGGAGGCTTATGCACGCGGTGCAGTACGACAGCTACGGCGGAGGAGCCGCAGC
JMFF025O03- TGCCGCCGGGAGGCTTATGCACGCGGTGCAGTACGACAGCTACGGCGGAGGAGCCGCAGC
____________________________________________________________
consensus TGCCGCCGGGAGGCTTATGCACGCGGTGCAGTACGACAGCTACGGCGGAGGAGCCGCAGC
. : . : . : . : . : . :
JMFF033E17- TTTGAAGCATGTTGAAGTTGCTGTACCTACTCCCAAGAAAGGTGAGCTCTTGGTGAAGAT
JMFF003J01- TTTGAAGCATGTTGAAGTTGCTGTACCTACTCCCAAGAAAGGTGAGCTCTTGGTGAAGAT
JMSF022D01- TTTGAAGCATGTTGAAGTTGCTGTACCTACTCCCAAGAAAGGTGAGCTCTTGGTGAAGAT
JMFF025O03- TTTGAAGCATGTTGAAGTTGCTGTACCTACTCCCAAGAAAGGTGAGCTCTTGGTGAAGAT
____________________________________________________________
consensus TTTGAAGCATGTTGAAGTTGCTGTACCTACTCCCAAGAAAGGTGAGCTCTTGGTGAAGAT
. : . : . : . : . : . :
JMFF033E17- GGAAGCAGTAAGCATAAATCCAATTGATTGGAAAATTCAAACAGGTGCCATTCGACCCAT
JMFF003J01- GGAAGCAGTAAGCATAAATCCAATTGATTGGAAAATTCAAACAGGTGCCATTCGACCCAT
JMSF022D01- GGAAGCAGTAAGCATAAATCCAATTGATTGGAAAATTCAAACAGGTGCCATTCGACCCAT
JMFF025O03- GGAAGCAGTAAGCATAAATCCAATTGATTGGAAAATTCAAACAGGTGCCATTCGACCCAT
____________________________________________________________
consensus GGAAGCAGTAAGCATAAATCCAATTGATTGGAAAATTCAAACAGGTGCCATTCGACCCAT
. : . : . : . : . : . :
JMFF033E17- CTTTCCCCGCAAATTTCCTCATATTCCAGCTAGTGATGTAGCGGGAGAAGTAGTGGAGGT
JMFF003J01- CTTTCCCCGCAAATTTCCTCATATTCCAGCTAGTGATGTAGCGGGAGAAGTAGTGGAGGT
JMSF022D01- CTTTCCCCGCAAATTTCCTCATATTCCAGCTAGTGATGTAGCGGGAGAAGTAGTGGAGGT
JMFF025O03- CTTTCCCCGCAAATTTCCTCATATTCCAGCTAGTGATGTAGCGGGAGAAGTAGTGGAGGT
____________________________________________________________
consensus CTTTCCCCGCAAATTTCCTCATATTCCAGCTAGTGATGTAGCGGGAGAAGTAGTGGAGGT
. : . : . : . : . : . :
JMFF033E17- TGGTTCTGGTGTTCAAAATTTCAAAGTCGGTGACAAAGTTGTTGCTACAATCAGCACTCG
JMFF003J01- TGGTTCTGGTGTTCAAAATTTCAAAGTCGGTGACAAAGTTGTTGCTACAATCAGCACTCG
JMSF022D01- TGGTTCTGGTGTTCAAAATTTCAAAGTCGGTGACAAAGTTGTTGCTACAATCAGCACTCG
JMFF025O03- TGGTTCTGGTGTTCAAAATTTCAAAGTCGGTGACAAAGTTGTTGCTACAATCAGCACTCG
____________________________________________________________
consensus TGGTTCTGGTGTTCAAAATTTCAAAGTCGGTGACAAAGTTGTTGCTACAATCAGCACTCG
. : . : . : . : . : . :
JMFF033E17- TGATGGAGGTGGATTAGCGGAGTATGCTGTGACAAAGGAGAGCTTGACAGCTGCGAGGCC
JMFF003J01- TGATGGAGGTGGATTAGCGGAGTATGCTGTGACAAAGGAGAGCTTGACAGCTGCGAGGCC
JMSF022D01- TGATGGAGGTGGATTAGCGGAGTATGCTGTGACAAAGGAGAGCTTGACAGCTGCGAGGCC
JMFF025O03- TGATGGAGGTGGATTAGCGGAGTATGCTGTGACAAAGGAGAGCTTGACAGCTGCGAGGCC
____________________________________________________________
consensus TGATGGAGGTGGATTAGCGGAGTATGCTGTGACAAAGGAGAGCTTGACAGCTGCGAGGCC
. : . : . : . : . : . :
JMFF033E17- ACCCGAAGTATCAGCAGCTGATGCTGCAGCCC-TTCCCATTGCTGGTCTTACAGCTCACG
JMFF003J01- ACCCGAAGTATCAGCAGCTGATGCTGCAGCCC-TTCCCATTGCTGGTCTTACAGCT
JMSF022D01- ACCCGAAGTATCAGCAGCTGATGCTGCAGCCC-TTCCCATTGCTGGTCTTACAGCTCACG
JMFF025O03- ACCCGAAGTATCAGCAGCTGATGCTGCAGCCC-TTCCCATTGCTGGTCTTACAGCTCACG
rJMFF013G12+ CGAAGTATCAGCAGCTGATGCTGCAGCCN-TTCCCATTGCTGGTCTTACAGCTCACG
rJMFF033E17+ CGAAGTATCAGCAGCTGATGCTGCAGCCC-TTCCCATTGCTGGTCTTACAGCTCACG
rJMSF022D01+ AGTATCAGCAGCTGATGCTGCAGCCCTTTCCCATTGCTGGTCTTACAGCTCACG
____________________________________________________________
consensus ACCCGAAGTATCAGCAGCTGATGCTGCAGCCC-TTCCCATTGCTGGTCTTACAGCTCACG
. : . : . : . : . : . :
JMFF033E17- AGGCACTAACCCGAATTGCGGGGGTCAAGCTCGACGGGAGCGGTCCTANGAAGAACATCC
JMSF022D01- AGGCACTAACCCGAATTGCGGGGGTCAAGCTCGACGGGAGCGGTCCTAGGAAGAACATCC
JMFF025O03- AGGCACTAACCCGAATTGCGGGGGTCAAGCTCGACGGGAGCGGTCCTAGGAAGAACATCC
rJMFF013G12+ AGGCACTAACCCGAATTGCGGGGGTCAAGCTCGACGGGAGCGGTCCTAGGAAGAACATCC
rJMFF033E17+ AGGCACTAACCCGAATTGCGGGGGTCAAGCTCGACGGGAGCGGTCCTAGGAAGAACATCC
rJMSF022D01+ AGGCACTAACCCGAATTGCGGGGGTCAAGCTCGACGGGAGCGGTCCTAGGAAGAACATCC
rJMFF003J01+ GGGTCAAGCTCGACGGGAGCGGTCNTAGGAAGAACATCC
rJMFF025O03+ AATTGCGGGGGTCAAGCTCGACGGGAGCGGTCCTAGGAAGAACATCC
____________________________________________________________
consensus AGGCACTAACCCGAATTGCGGGGGTCAAGCTCGACGGGAGCGGTCCTAGGAAGAACATCC
. : . : . : . : . : . :
JMFF033E17- TTGTGACTGCTGCCT
JMSF022D01- TTGTGACTGCTGCCT-CCGGTGGCGTGGGCCACTACGCTGTCCAGCTGGCAAA
JMFF025O03- TTGTGACTGCTGCCT-CCGGTGGCGTGGGCCACTACGCTGTCCAGCTGGCAAAGCTGGGG
rJMFF013G12+ TTGTGACTGCTGCCTCCCGGTGGCGTGGGCCACTACGCTGTCCAGCTGGCAAAGCTGGGG
rJMFF033E17+ TTGTGACTGCTGCCTCCCGGTGGCGTGGGCCACTACGCTGTCCAGCTGGCAAAGCTGGGG
rJMSF022D01+ TTGTGACTGCTGCCT-CCGGTGGCGTGGGCCACTACGCTGTCCAGCTGGCAAAGCTGGGG
rJMFF003J01+ TTGTGACTGCTGCCT-CCGGTGGCGTGGGCCACTACGCTGTCCAGCTGGCAAAGCTGGGG
rJMFF025O03+ TTGTGACTGCTGCCTCCCGGTGGCGTGGGCCACTACGCTGTCCAGCTGGCAAAGCTGGGG
____________________________________________________________
consensus TTGTGACTGCTGCCT-CCGGTGGCGTGGGCCACTACGCTGTCCAGCTGGCAAAGCTGGGG
. : . : . : . : . : . :
JMFF025O03- AACACACACGTCACAG
rJMFF013G12+ AACACACACGTCACAGCCACGTGTGGGGCACGCAACATCGAGTTCGTGAAGAGCTTAGGC
rJMFF033E17+ AACACACACGTCACAGCCACGTGTGGGGCACGCAACATCGAGTTCGTGAAGAGCTTAGGC
rJMSF022D01+ AACACACACGTCACAGCCACGTGTGGGGCACGCAACATCGAGTTCGTGAAGAGCTTAGGC
rJMFF003J01+ AACACACACGTCACAGCCACGTGTGGGGCACGCAACATCGAGTTCGTGAAGAGCTTAGGC
rJMFF025O03+ AACACACACGTCACAGCCACGTGTGGGGCACGCAACATCGAGTTCGTGAAGAGCTTAGGC
____________________________________________________________
consensus AACACACACGTCACAGCCACGTGTGGGGCACGCAACATCGAGTTCGTGAAGAGCTTAGGC
. : . : . : . : . : . :
rJMFF013G12+ GCAGACGAGGTCCTCGACTACAAGACCCCCGAGGGCACAGCTCTTCACAGCTCATCGGGC
rJMFF033E17+ GCAGACGAGGTCCTCGACTACAAGACCCCCGAGGGCACAGCTCTTCACAGCTCATCGGGC
rJMSF022D01+ GCAGACGAGGTCCTCGACTACAAGACCCCCGAGGGCACAGCTCTTCACAGCTCATCGGGC
rJMFF003J01+ GCAGACGAGGTCCTCGACTACAAGACCCCCGAGGGCACAGCTCTTCACAGCTCATCGGGC
rJMFF025O03+ GCAGACGAGGTCCTCGACTACAAGACCCCCGAGGGCACAGCTCTTCACAGCTCATCGGGC
____________________________________________________________
consensus GCAGACGAGGTCCTCGACTACAAGACCCCCGAGGGCACAGCTCTTCACAGCTCATCGGGC
. : . : . : . : . : . :
rJMFF013G12+ CAGAAATACGACGCTGTCATCCACTGCACCTCGGGAATTCCCTGGTCTACCTTCGAGCCC
rJMFF033E17+ CAGAAATACGACGCTGTCATCCACTGCACCTCGGGAATTCCCTGGTCTACCTTCGAGCCC
rJMSF022D01+ CAGAAATACGACGCTGTCATCCACTGCACCTCGGGAATTCCCTGGTCTACCTTCGAGCCC
rJMFF003J01+ CAGAAATACGACGCTGTCATCCACTGCACCTCGGGAATTCCCTGGTCTACCTTCGAGCCC
rJMFF025O03+ CAGAAATACGACGCTGTCATCCACTGCACCTCGGGAATTCCCTGGTCTACCTTCGAGCCC
____________________________________________________________
consensus CAGAAATACGACGCTGTCATCCACTGCACCTCGGGAATTCCCTGGTCTACCTTCGAGCCC
. : . : . : . : . : . :
rJMFF013G12+ AATCTCAGCGACAACGGCAAGGTAATCGATTTCACTCCCACCCCCGCCGCCCTCTTAACG
rJMFF033E17+ AATCTCAGCGACAACGGCAAGGTAATCGATTTCACTCCCACCCCCGCCGCCCTCTTAACG
rJMSF022D01+ AATCTCAGCGACAACGGCAAGGTAATCGATTTCACTCCCACCCCCGCCGCCATCTTAACG
rJMFF003J01+ AATCTCAGCGACAACGGCAAGGTAATCGATTTCACTCCCACCCCCGCCGCCCTCTTAACG
rJMFF025O03+ AATCTCAGCGACAACGGCAAGGTAATCGATTTCACTCCCACCCCCGCCGCCCTCTTAACG
____________________________________________________________
consensus AATCTCAGCGACAACGGCAAGGTAATCGATTTCACTCCCACCCCCGCCGCCCTCTTAACG
. : . : . : . : . : . :
rJMFF013G12+ TTCGCCCTCAAGAAGCTCACCTTCTCAAAGAAGCAGCTGGTGCCAATGATTTTATCTGCC
rJMFF033E17+ TTCGCCCTCAAGAAGCTCACCTTCTCAAAGAAGCAGCTGGTGCCAATGATTTTATCTGCC
rJMSF022D01+ TTCGCCCTCAAGAAGCTCACCTTCTCAAAGAAGCAGCTGGTGCCAATGATTTTATCTGCC
rJMFF003J01+ TTCGCCCTCAAGAAGCTCACCTTCTCAAAGAAGCAGCTGGTGCCAATGATTTTATCTGCC
rJMFF025O03+ TTCGCCCTCAAGAAGCTCACCTTCTCAAAGAAGCAGCTGGTGCCAATGATTTTATCTGCC
____________________________________________________________
consensus TTCGCCCTCAAGAAGCTCACCTTCTCAAAGAAGCAGCTGGTGCCAATGATTTTATCTGCC
. : . : . : . : . : . :
rJMFF013G12+ AAAGCTGAGAACCTGGACTATCTGGTTAAACTAGTGAAAGAGGGGAAGCTTAAAAGTGTT
rJMFF033E17+ AAAGCTGAGAACCTGGACTATCTGGTTAAACTAGTGAAAGAGGGGAAGCTTAAAAGTGTT
rJMSF022D01+ AAAGCTGAGAACCTGGACTATCTGGTTAAACTAGTGAAAGAGGGGAAGCTTAAAAGTGTT
rJMFF003J01+ -AAGCTGAGAACCTGGACTATCTGGTTAAACTAGTGAAAGAGGGGAAGCTTAAAAGTGTT
rJMFF025O03+ -AAGCTGAGAACCTGGACTATCTGGTTAAACTAGTGAAAGAGGGGAAGCTTAAAAGTGTT
____________________________________________________________
consensus AAAGCTGAGAACCTGGACTATCTGGTTAAACTAGTGAAAGAGGGGAAGCTTAAAAGTGTT
. : . : . : . : . : . :
rJMFF013G12+ ATAGACTCAAAACACCCTCTGAGCAAGGCAGAAGATGCTTGGACTAGGAGCATTGAGGGG
rJMFF033E17+ ATAGACTCAAAACACCCTCTGAGCAAGGCAGAAGATGCTTGGACTAGGAGCATTGAGGGG
rJMSF022D01+ ATAGACTCAAAACACCCTCTGAGCAAGGCAGAAGATGCTTGGACTAGGAGCATTGAGGGG
rJMFF003J01+ ATAGACTCAAAACACCCTCTGAGCAAGGCAGAAGATGCTTGGACTAGGAGCATTGAGGGG
rJMFF025O03+ ATAGACTCAAAACACCCTCTGAGCAAGGCAGAAGATGCTTGGACTAGGAGCATTGAGGGG
____________________________________________________________
consensus ATAGACTCAAAACACCCTCTGAGCAAGGCAGAAGATGCTTGGACTAGGAGCATTGAGGGG
. : . : . : . : . : . :
rJMFF013G12+ CATGCCACGGGGAAGATAATTGTGGAGCCATAAAACAATATGTATAATGTTGTATGTTTT
rJMFF033E17+ CATGCCACGGGGAAGATAATTGTGGAGCCATAAAACAATATGTATAATGTTGTATGTTTT
rJMSF022D01+ CATGCCACGGGGAAGATAATTGTGGAGCCATAAAACAATATGTATAATGTTGTATGTTTT
rJMFF003J01+ CATGCCACGGGGAAGATAATTGTGGAGCCATAAAACAATATGTATAATGTTGTATGTTTT
rJMFF025O03+ CATGCCACGGGGAAGATAATTGTGGAGCCATAAAACAATATGTATAATGTTGTATGTTTT
____________________________________________________________
consensus CATGCCACGGGGAAGATAATTGTGGAGCCATAAAACAATATGTATAATGTTGTATGTTTT
. : . : . : . : . : . :
rJMFF013G12+ AAAATGGATGTGTGGTGTGTTAATGTCCTCAAGAACCATGTATTTGGAACCATTACAAGG
rJMFF033E17+ AAAATGGATGTGTGGTGTGTTAATGTCCTCAAGAACCATGTATTTGGAACCATTACAAGG
rJMSF022D01+ AAAATGGATGTGTGGTGTGTTAATGTCCTCAAGAACCATGTATTTGGAACCATTACAAGG
rJMFF003J01+ AAAATGGATGTGTGGTGTGTTAATGTCCTCAAGAACCATGTATTTGGAACCATTACAAGG
rJMFF025O03+ AAAATGGATGTGTGGTGTGTTAATGTCCTCAAGAACCATGTATTTGGAACCATTACAAGG
____________________________________________________________
consensus AAAATGGATGTGTGGTGTGTTAATGTCCTCAAGAACCATGTATTTGGAACCATTACAAGG
. : . : . : . : . : . :
rJMFF013G12+ TTGTGCTAATGTATCATGTATGATGTAACTAGGAATAT
rJMFF033E17+ TTGTGCTAATGTATCATGTATGATGTAACTAGGAATAT
rJMSF022D01+ TTGTGCTAATGTATCATGTATGATGTAACTAGGAATAT
rJMFF003J01+ TTGTGCTAATGTATCATGTATGATGTAACTAGGAATATGCTATAGTTGTTCATATCATAT
rJMFF025O03+ TTGTGCTAATGTATCATGTATGATGTAACTAGGAATATGCTATAGTTGTTCATATCATAT
____________________________________________________________
consensus TTGTGCTAATGTATCATGTATGATGTAACTAGGAATATGCTATAGTTGTTCATATCATAT