Contig 001113:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023P05Sequence762001113 (2)ref|XP_009621843.1|1e-98PREDICTED: autophagy-related protein 18d-like [Nicotiana tomentosiformis]
JMSF019D11Sequence531014640ref|XP_009621843.1|9e-66PREDICTED: autophagy-related protein 18d-like [Nicotiana tomentosiformis]780001113 (2)ref|XP_009621843.1|5e-105PREDICTED: autophagy-related protein 18d-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF019D11+ ATGGATGGGC
                      ____________________________________________________________
consensus ATGGATGGGC
 
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rJMSF019D11+ TTCTTCNTGCCACGGCTAGCACCAAGGGCACTTTGATAAGAATTTTCAATACAATGGATG
rJMFF023P05+ GCACCAAGGGCACTTTGATAAGAATTTTCAATACAATGGATG
                      ____________________________________________________________
consensus TTCTTCNTGCCACGGCTAGCACCAAGGGCACTTTGATAAGAATTTTCAATACAATGGATG
 
. : . : . : . : . : . :
rJMSF019D11+ GGACTCAGTTGCAAGAGGTACGCAGAGGTGTAGACAAAGCCGATATCTACAGTATAGCAC
rJMFF023P05+ GGACTCAGTTGCAAGAGGTACGCAGAGGTGTAGACAAAGCCGATATCTACAGTATAGCAC
                      ____________________________________________________________
consensus GGACTCAGTTGCAAGAGGTACGCAGAGGTGTAGACAAAGCCGATATCTACAGTATAGCAC
 
. : . : . : . : . : . :
rJMSF019D11+ TGTCACCAAATGTTCAGTGGTTGTCGGTTTCTAGTGACAAAGGTACTATTCATGTATACA
rJMFF023P05+ TGTCACCAAATGTTCAGTGGTTGTCGGTTTCTAGTGACAAAGGTACTATTCATGTATACA
                      ____________________________________________________________
consensus TGTCACCAAATGTTCAGTGGTTGTCGGTTTCTAGTGACAAAGGTACTATTCATGTATACA
 
. : . : . : . : . : . :
rJMSF019D11+ GCCTAAGAGTGCGAATTGTTGGGGAGGATGTTGCAACTGATAGCAGCACTGTTGGAAATC
rJMFF023P05+ GCCTAAGAGTGCGAATTGTTGGGGAGGATGTTGCAACTGATAGCAGCACTGTTGGAAATC
                      ____________________________________________________________
consensus GCCTAAGAGTGCGAATTGTTGGGGAGGATGTTGCAACTGATAGCAGCACTGTTGGAAATC
 
. : . : . : . : . : . :
rJMSF019D11+ AAGCGCTGTTGTATCAACAGCATTCATCAACTGCACTTGATGCTCTTATTTCTCCGAGCA
rJMFF023P05+ AAGCGCTGTTGTATCAACAGCATTCATCAACTGCACTTGATGCTCTTATTTCTCCGAGCA
                      ____________________________________________________________
consensus AAGCGCTGTTGTATCAACAGCATTCATCAACTGCACTTGATGCTCTTATTTCTCCGAGCA
 
. : . : . : . : . : . :
rJMSF019D11+ CCGGTGCCAACCCTGGCTCATCATTGTCTTTCATGAGAGGGGTTTTACCAAGGTATTTTA
rJMFF023P05+ CCGGTGCCAACCCTGGCTCATCATTGTCTTTCATGAGAGGGGTTTTACCAAGGTATTTTA
                      ____________________________________________________________
consensus CCGGTGCCAACCCTGGCTCATCATTGTCTTTCATGAGAGGGGTTTTACCAAGGTATTTTA
 
. : . : . : . : . : . :
rJMSF019D11+ GCTCGGAGTGGTCATTTGCTCAGTTTCACTTGCCAGAGTGTACCCAATTCATCTCTGCAT
rJMFF023P05+ GCTCGGAGTGGTCATTTGCTCAGTTTCACTTGCCAGAGTGTACCCAATTCATCTCTGCAT
                      ____________________________________________________________
consensus GCTCGGAGTGGTCATTTGCTCAGTTTCACTTGCCAGAGTGTACCCAATTCATCTCTGCAT
 
. : . : . : . : . : . :
rJMSF019D11+ TTGGTTCTCAGAACACTGTTATTATCGCTGGCATGGACGGGAGTTTCTACAGGTGTAGCT
rJMFF023P05+ TTGGTTCTCAGAACACTGTTATTATCGCTGGCATGGACGGGAGTTTCTACAGGTGTAGCT
                      ____________________________________________________________
consensus TTGGTTCTCAGAACACTGTTATTATCGCTGGCATGGACGGGAGTTTCTACAGGTGTAGCT
 
. : . : . : . : . : . :
rJMSF019D11+ TTGACCCTGTGAATGGAGGGGCTATGGTGCAGCAAGAATATGTTTGCTTTCTGAAAACAG
rJMFF023P05+ TTGACCCTGTGAATGGAGGGGCTATGGTGCAGCAAGAATATGTTTGCTTTCTGAAAACAG
                      ____________________________________________________________
consensus TTGACCCTGTGAATGGAGGGGCTATGGTGCAGCAAGAATATGTTTGCTTTCTGAAAACAG
 
. : . : . : . : . : . :
rJMSF019D11+ AGAGTAGACCTAGATAGTGCCCAACTTCAGTCATATGGAAATATGCTTATCATATCCTTC
rJMFF023P05+ AGAGTAGACCTAGATAGTGCCCAACTTCAGTCATATGGAAATATGCTTATCATATCCTTC
                      ____________________________________________________________
consensus AGAGTAGACCTAGATAGTGCCCAACTTCAGTCATATGGAAATATGCTTATCATATCCTTC
 
. : . : . : . : . : . :
rJMSF019D11+ CTCTGTATATACATCATTGCCTATTACTTTGGATGTAGAAAAAGGAAAAAAGGTCAGATG
rJMFF023P05+ CTCTGTATATACATCATTGCCTATTACTTTGGATGTAGAAAAAGGAAAAAAGGTCAGATG
                      ____________________________________________________________
consensus CTCTGTATATACATCATTGCCTATTACTTTGGATGTAGAAAAAGGAAAAAAGGTCAGATG
 
. : . : . : . : . : . :
rJMSF019D11+ TTATTGGCTGCTGATATATACTTTAATAAGTGTACATAATTCTTTCAGTTTTTCAAAGAT
rJMFF023P05+ TTATTGGCTGCTGATATATACTTTAATAAGTGTACATAATTCTTTCAGTTTTTCAAAGAT
                      ____________________________________________________________
consensus TTATTGGCTGCTGATATATACTTTAATAAGTGTACATAATTCTTTCAGTTTTTCAAAGAT
 
. : . : . : . : . : . :
rJMSF019D11+ CCAAAGTGTGTAGTAGGTGTGAGACTCTCTCTATAAGAAATCTGAAATAT
rJMFF023P05+ CCAAAGTGTGTAGTAGGTGTGAGACTCTCTCTATAAGAAATCTGAAATATCGATCCTCTT
                      ____________________________________________________________
consensus CCAAAGTGTGTAGTAGGTGTGAGACTCTCTCTATAAGAAATCTGAAATATCGATCCTCTT