Contig 001107:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021N21Sequence567010672 (2)gb|KDO80637.1|3e-78hypothetical protein CISIN_1g009233mg [Citrus sinensis]746001107 (2)ref|XP_009627331.1|7e-63PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Nicotiana tomentosif
JMSF020G10Sequence281010672 (2)ref|XP_009774511.1|4e-10PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Nicotiana sylvestris728001107 (2)ref|XP_009627331.1|3e-68PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Nicotiana tomentosif

Alignment

This contig is upended


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rJMSF020G10+                             ATCAAAGCCAGGCAAACTGGAGGGGCAGAGTACGAAGCAGT
rJMFF021N21+                                           AACTGGAGGGGCAGAGTACGAAGCAGT
                      ____________________________________________________________
consensus                                ATCAAAGCCAGGCAAACTGGAGGGGCAGAGTACGAAGCAGT
 
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rJMSF020G10+          GTTCTACACACCTTCACCAACTACATGTGTGTTTGCCTTCATCCAGGAAGAAGACTAGGT
rJMFF021N21+          GTTCTACACACNTTCACCAACTACATGTGTGTTTGCCTTCATCCAGGAAGAAGACTAGGT
                      ____________________________________________________________
consensus             GTTCTACACACCTTCACCAACTACATGTGTGTTTGCCTTCATCCAGGAAGAAGACTAGGT
 
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rJMSF020G10+          TATTATACAGGATGTCACTGGATTTTGCTCCCCTGCTCAAACACATTCCCTTCATGCAAT
rJMFF021N21+          TATTATACAGGGTGTCACTGGATTTTGCTCCCCTGCTCAAACACATTCCCTTCATGCAAT
                      ____________________________________________________________
consensus             TATTATACAGGGTGTCACTGGATTTTGCTCCCCTGCTCAAACACATTCCCTTCATGCAAT
 
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rJMSF020G10+          ATTTGTGGAGGCACTTTGCAGAGCAGGTCTTAAATGAGGATCTGCGGCTTGTAATTGGGC
rJMFF021N21+          ATTTGTGGAGGCACTTTGCAGAGCAGGTCTTAAATGAGGATCTGCGGCTTGTAATTGGGC
                      ____________________________________________________________
consensus             ATTTGTGGAGGCACTTTGCAGAGCAGGTCTTAAATGAGGATCTGCGGCTTGTAATTGGGC
 
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rJMSF020G10+          AACAGGACCGGATGATCAATGGCGCTAACATCTGGAATCTTCCCGTGGCTTATGATAAGC
rJMFF021N21+          AACAGGACCGGATGATCAATGGCGCTAACATCTGGAATCTTCCCGTGGCTTATGATAAGC
                      ____________________________________________________________
consensus             AACAGGACCGGATGATCAATGGCGCTAACATCTGGAATCTTCCCGTGGCTTATGATAAGC
 
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rJMSF020G10+          TAGGAGTAAGGTATAGGATTTGGAGGGATGCTGTAGAACGAGGAACTAAACAATTACCTT
rJMFF021N21+          TAGGAGTAAGGTATAGGATTTGGAGGGATGCTGTAGAACGAGGAACTAAACAATTACCTT
                      ____________________________________________________________
consensus             TAGGAGTAAGGTATAGGATTTGGAGGGATGCTGTAGAACGAGGAACTAAACAATTACCTT
 
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rJMSF020G10+          TCAGCGAATGAGCATTCAACGAAAGTCAATAACGGGTTACCTCCTTTCATGTTACTTCTG
rJMFF021N21+          TCAGCGAATGAGCATTCAACGAAAGCCAATAACGGGTTACCTCCTTTCATGTTACTTCTG
                      ____________________________________________________________
consensus             TCAGCGAATGAGCATTCAACGAAAGTCAATAACGGGTTACCTCCTTTCATGTTACTTCTG
 
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rJMSF020G10+          AACTTCACCTCAACAAGGAGCTATAGTTGTCTTCCAGCATACTTCAGGGACTACGTCCAA
rJMFF021N21+          AACTTCACCTCAACAAGGAGCTATAGTTGTCTTCCAGCATACTTCAGGGACTACGTCCAA
                      ____________________________________________________________
consensus             AACTTCACCTCAACAAGGAGCTATAGTTGTCTTCCAGCATACTTCAGGGACTACGTCCAA
 
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rJMSF020G10+          ATTTGGACAAAGTACCCGTTTTTCAAGACGAAGTAACAGAGCGTTCAGCTANTAATTCAT
rJMFF021N21+          ATTTGGACAAAGTACCCGTTTTTCAAGACGAAGTAACAGAGCGTTCAGCTACTAATTCAT
                      ____________________________________________________________
consensus             ATTTGGACAAAGTACCCGTTTTTCAAGACGAAGTAACAGAGCGTTCAGCTACTAATTCAT
 
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rJMSF020G10+          GGCAAATTAAAGGACAATGGCTTCTGCATCAACCACTTTGCAAAATTATAAGTTCTCCGC
rJMFF021N21+          GGCAAATTAAAGGACAATGGCTTCTGCATCAACCACTTTGCAAAATTATAAGTTCTCCGC
                      ____________________________________________________________
consensus             GGCAAATTAAAGGACAATGGCTTCTGCATCAACCACTTTGCAAAATTATAAGTTCTCCGC
 
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rJMSF020G10+          CAAGTTGGTTGGTAGTTTTTTTCTTTTTCATTTTTCTTTGTACAGTTTTGAACAACTTAT
rJMFF021N21+          CAAGTTGGTTGGTAGTTTTTTTCTTTTTCATTTTTCTTTGTACAGTTTTGAACAACTTAT
                      ____________________________________________________________
consensus             CAAGTTGGTTGGTAGTTTTTTTCTTTTTCATTTTTCTTTGTACAGTTTTGAACAACTTAT
 
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rJMSF020G10+          ATCCCACTTTCCCCATTGGTTGTATTCACCCAACACTGCTTACAAAGTTGAAGATTACTT
rJMFF021N21+          ATCCCACTTTCCCCATTGGTTGTATTCACCCAACACTGCTTACAAAGTTGAAGATTACTT
                      ____________________________________________________________
consensus             ATCCCACTTTCCCCATTGGTTGTATTCACCCAACACTGCTTACAAAGTTGAAGATTACTT
 
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rJMSF020G10+          AACTAGGCTCAAAACTGCCCAGCTTCA                                 
rJMFF021N21+          -ACTAGGCTCAAAACTGCCCAGCTTCATATGTAATGCAGGGTAGAATGGTTAATGACAAT
                      ____________________________________________________________
consensus             AACTAGGCTCAAAACTGCCCAGCTTCATATGTAATGCAGGGTAGAATGGTTAATGACAAT