| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF013A02 | Sequence | 520 | 007627 (7) | gb|AAB33481.2| | 2e-38 | alcohol dehydrogenase ADH [Solanum lycopersicum] | 726 | 001104 (5) | ref|XP_009762562.1| | 5e-74 | PREDICTED: alcohol dehydrogenase-like 7 [Nicotiana sylvestris] |
| JMFF013F19 | Sequence | 484 | 007627 (7) | gb|AAB33481.2| | 2e-41 | alcohol dehydrogenase ADH [Solanum lycopersicum] | 630 | 001104 (5) | ref|XP_009762562.1| | 3e-35 | PREDICTED: alcohol dehydrogenase-like 7 [Nicotiana sylvestris] |
| JMFF021G12 | Sequence | 519 | 007627 (7) | gb|AAB33481.2| | 2e-40 | alcohol dehydrogenase ADH [Solanum lycopersicum] | 755 | 001104 (5) | gb|KJB11813.1| | 5e-33 | hypothetical protein B456_002G1197001 [Gossypium raimondii] |
| JMFF028G21 | Sequence | 523 | 007627 (7) | ref|XP_004238410.1| | 1e-52 | PREDICTED: alcohol dehydrogenase-like 7 [Solanum lycopersicum] | 724 | 001104 (5) | ref|XP_009762562.1| | 6e-79 | PREDICTED: alcohol dehydrogenase-like 7 [Nicotiana sylvestris] |
| JMSF034M16 | Sequence | 663 | 007627 (7) | ref|XP_009762562.1| | 4e-57 | PREDICTED: alcohol dehydrogenase-like 7 [Nicotiana sylvestris] | 721 | 001104 (5) | ref|XP_010101303.1| | 6e-119 | Alcohol dehydrogenase-like 7 [Morus notabilis] gb|EXB88238.1| Alcohol dehydrogen |
This contig is upended
. : . : . : . : . : . :
rJMSF034M16+ GGCTTGCCTCCTAAGCTGTGGAGTGTCAACTGGAGTAGGCGCTGCAATCAGATCA
____________________________________________________________
consensus GGCTTGCCTCCTAAGCTGTGGAGTGTCAACTGGAGTAGGCGCTGCAATCAGATCA
. : . : . : . : . : . :
rJMSF034M16+ GCGAATGTGGAACCGGGATCAACTGTTGCTATCTTTGGTTTGGGATCAATTGGATTAGCG
____________________________________________________________
consensus GCGAATGTGGAACCGGGATCAACTGTTGCTATCTTTGGTTTGGGATCAATTGGATTAGCG
. : . : . : . : . : . :
rJMSF034M16+ GTTGCGGAGGGAGCCAGGCTTTGTGGCGCTGCAAGAATTATCGGTGTGGATATAAATCCA
rJMFF028G21+ CGGAGGGAGCCAGGCTTTGTGGCGCTGCAAGAATTATCGGTGTGGATATAAATCCA
____________________________________________________________
consensus GTTGCGGAGGGAGCCAGGCTTTGTGGCGCTGCAAGAATTATCGGTGTGGATATAAATCCA
. : . : . : . : . : . :
rJMSF034M16+ GATAAATTTGAGAGAGGTAAAACATTTGGGGTTTCCGACTTTGTCAATTCTTTGACTATT
rJMFF028G21+ GATAAATTTGAGATAGGTAAAACATTTGGGGTTTCCGACTTTGTCAATTCTTTGACTATT
rJMFF013A02+ TCCGACTTTGTCAATTCTTTGACTATT
____________________________________________________________
consensus GATAAATTTGAGATAGGTAAAACATTTGGGGTTTCCGACTTTGTCAATTCTTTGACTATT
. : . : . : . : . : . :
rJMSF034M16+ GGGAATAAATCAGTAAGCCAGGTGATATGTGAGATGACT-GGGGGCGGTGCAGACTATTG
rJMFF028G21+ GGGAATAAATCAGTAAGCCAGGTGATATGTGAGATGACT-GGGGGCGGTGCAGACTATTG
rJMFF013A02+ GGGAATAAATCAGTAAGCCAGGTGATATGTGAGATGACT-GGGGGCGGTGCAGACTATTG
rJMFF021G12+ CCAGGTGATATGTGAGATGACTAGGGGGCGGTGCAGACTATTG
____________________________________________________________
consensus GGGAATAAATCAGTAAGCCAGGTGATATGTGAGATGACT-GGGGGCGGTGCAGACTATTG
. : . : . : . : . : . :
rJMSF034M16+ CTTTGAATGCGTCGGCCAGGCAACATTGGTGCAGGAAGCATACGCCAGCTGCCGGAAGGG
rJMFF028G21+ CTTTGAATGTGCCGGCCAGGCAACATTGGTGCAGGAAGCATATGCCAGCTGCCGGAAGGG
rJMFF013A02+ CTTTGAATGCGTCGGCCAGGCAACATTGGTGCAGGAAGCATACGCCAGCTGCCGGAAGGG
rJMFF013F19+ CCAGCTGCCGGAAGGG
rJMFF021G12+ CTTGGAATGTGCCGGCCAGGCAACATTGATGCAGGAAGCATATGCCAGCTGCCGGAAGGG
____________________________________________________________
consensus CTTTGAATGTGTCGGCCAGGCAACATTGGTGCAGGAAGCATATGCCAGCTGCCGGAAGGG
. : . : . : . : . : . :
rJMSF034M16+ TTGGGGCAAGACAGTGGTTTTAGGAGTTGATAAGCCCGGAGCGCAGCTGAGCTTGAACTC
rJMFF028G21+ TTGGGGCAAGACAGTGGTTTTAGGAGTTGATCAGCCCGGAAC---GCTGAACTTGAACTC
rJMFF013A02+ TTGGGGCAAGACAGTGGTTTTAGGAGTTGATAAGCCCGGAGCGCAGCTGAGCTTGAACTC
rJMFF013F19+ TTGGGGCAAGACAGTGGTTTTAGGAGTTGATCAGCCCGGAAC---GCTGAACTTGAACTC
rJMFF021G12+ TTGGGGCAAGACAGTGG-TTTAGGAGTTGATCAGCCCGGAAC---GCTGAACTTGAACTC
____________________________________________________________
consensus TTGGGGCAAGACAGTGGTTTTAGGAGTTGATCAGCCCGGAAC---GCTGAACTTGAACTC
. : . : . : . : . : . :
rJMSF034M16+ TTTCGAGGTTCTTCACAGTGGCAAAACCCTCATCGGGTCGCTGTTTGGAGGTCTCAAGCC
rJMFF028G21+ TTTTGAGGTTCTTCACAGTGGCAAAACCCTCACCGGGAAGCTGTTCGGAGGTCTCAAGCC
rJMFF013A02+ TTTCGAGGTTCTTCACAGTGGCAAAACCCTCATCGGGTCGCTGTTTGGAGGTCTCAAGCC
rJMFF013F19+ TTTTGAGGTTCTTCACAGTGGCAAAACCCTCACCGGGAAGCTGTTCGGAGGTCTCAAGCC
rJMFF021G12+ TTTTGAGGTTCTTCACAGTGGCAAAACCCTCACCGGGAAGCTGTTCGGAGGTCTCAAGCC
____________________________________________________________
consensus TTTTGAGGTTCTTCACAGTGGCAAAACCCTCACCGGGAAGCTGTTCGGAGGTCTCAAGCC
. : . : . : . : . : . :
rJMSF034M16+ AAAATCTGATATCCCCGTCCTTGCTAAGCGTTACTCAGATGGGGAACTAGAACTAGATAA
rJMFF028G21+ AAAATCTGATATCCCCGTCCTTGCTAAGCGTTACACAGATGGGGAACTAGAACTAGATAA
rJMFF013A02+ AAAATCTGATATCCCCGTCCTTGCTAAGCGTTACTCAGATGGGGAACTAGAACTAGATAA
rJMFF013F19+ AAAATCTGATATCCCCGTCCTTGCTAAGCGTTACACAGATGGGGAACTAGAACTAGATAA
rJMFF021G12+ AAAATCTGATATCCCCGTCCTTGCTAAGCGTTACACAGATGGGGAACTAGAACTAGATAA
____________________________________________________________
consensus AAAATCTGATATCCCCGTCCTTGCTAAGCGTTACACAGATGGGGAACTAGAACTAGATAA
. : . : . : . : . : . :
rJMSF034M16+ ATTTGTTACTCATGAAGTGGGTTTTGAAGACATCAACAAAGCTTTTGACTTGCTTATTCA
rJMFF028G21+ ATTTGTGACTCATGAAGTGGGTTTTGAAGACATCAACAAAGCTTTTGACTTGCTTATTCA
rJMFF013A02+ ATTTGTTACTCATGAAGTGGGTTTTGAAGACATCAACAAAGCTTTTGACTTGCTTATTCA
rJMFF013F19+ ATTTGTGACTCATGAAGTGGGTTTTGAAGACATCAACAAAGCTTTTGACTTGCTTATTCA
rJMFF021G12+ ATTTGTGACTCATGAAGTGGGTTTTGAAGACATCAACAAAGCTTTTGACTTGCTTATTCA
____________________________________________________________
consensus ATTTGTGACTCATGAAGTGGGTTTTGAAGACATCAACAAAGCTTTTGACTTGCTTATTCA
. : . : . : . : . : . :
rJMSF034M16+ AGGGAAAAGCTTAAGGTGTGTTATTTGGATGGATAAGTGATTCTTTCTATGCTATCAATC
rJMFF028G21+ AGGGAAAAGCTTAAGGTGTGTTATTTGGATGGATAAGTGATAC-TTCTATGGT----ATC
rJMFF013A02+ AGGGAAAAGCTTAAGGTGTGTTATTTGGATGGATAAGTGATTCTTTCTATGCTATCAATC
rJMFF013F19+ AGGGAAAAGCTTAAGGTGTGTTATTTGGATGGATAAGTGATAC-TTCTATGGT----ATC
rJMFF021G12+ AGGGAAAAGCTTAAGGTGTGTTATTTGGATGGATAAGTGATAC-TTCTATGGT----ATC
____________________________________________________________
consensus AGGGAAAAGCTTAAGGTGTGTTATTTGGATGGATAAGTGATAC-TTCTATGGT----ATC
. : . : . : . : . : . :
rJMSF034M16+ ACTATGTGTATCTTACATTGCTCTTTATATGTAATTGCTATATATATTGTGTAAG
rJMFF028G21+ ACTATGTGTATCTTACATTGCTCTTTATATGCAATTGCTATATATATTGTGTAAGTAACA
rJMFF013A02+ ACTATGTGTATCTTACATTGCTCTTTATATGTAATTGCTATATATATTGTGTAAGTAACC
rJMFF013F19+ ACTATGTGTATCTTACATTGCTCTTTATATGCAATTGCTATATATATTGTGTAAGTAACA
rJMFF021G12+ ACTATGTGTATCTTACATTGCTCTTTATATGCAATTGCTATATATATTGTGTAAGTAACA
____________________________________________________________
consensus ACTATGTGTATCTTACATTGCTCTTTATATGCAATTGCTATATATATTGTGTAAGTAACA
. : . : . : . : . : . :
rJMFF028G21+ TA-------TGTAATACCTATGTTTGTGTCTGTTGATTGGCATCGATCAATATCTCTTGC
rJMFF013A02+ CAAAACCATATTTATACCTATGTTTGTGTCTGTTGATTGGCATCGATCAATATCTCTTGC
rJMFF013F19+ TA-------TGTAATACCTATGTTTGTGTCTGTTGATTGGCATCGATCAATATCTCTTGC
rJMFF021G12+ TA-------TGTAATACCTATGTTTGTGTCTGTTGATTGGCATCGATCAATATCTCTTGC
____________________________________________________________
consensus TA-------TGTAATACCTATGTTTGTGTCTGTTGATTGGCATCGATCAATATCTCTTGC
. : . : . : . : . : . :
rJMFF028G21+ ACTAGGTACACACCCAAAATGCTTTGGGGGAAGTTTTGGGTATCAAATCGTTTCGATA
rJMFF013A02+ ACTAGGTACACA-CCAAAAAGCTTTGGGGGAAGTTTTGGGTATCAAATTGTTTCGATATT
rJMFF013F19+ ACTAGGTACACACCCAAAATGCTTTGGGGGAAGTTTTGGGTATCAAATCGTTTCGATAGT
rJMFF021G12+ ACTAGGTACACACCCAAAATGCTTTGGGGGAAGTTTTGGGTATCAAATCGTTTCGATAGT
____________________________________________________________
consensus ACTAGGTACACACCCAAAATGCTTTGGGGGAAGTTTTGGGTATCAAATCGTTTCGATAGT
. : . : . : . : . : . :
rJMFF013A02+ ACTTGATACAAACTCAAACTTTTTGTATTCATTCTTTTGTT---TGCAAAAGATATTGAT
rJMFF013F19+ A-TTGATACAAACTTAAATATTTTGTATTCATTCTTTTGTTGTGTGCAAAAGACATTGAT
rJMFF021G12+ A-TTGATACAAACTTAAATATTTTGTATTCATTCTTTTGTTGTGTGCAAAAGACATTGAT
____________________________________________________________
consensus A-TTGATACAAACTTAAATATTTTGTATTCATTCTTTTGTTGTGTGCAAAAGACATTGAT
. : . : . : . : . : . :
rJMFF013A02+ GCCGATCGGGTTAGTAATTGAACCTCTATAATTTGTATTGCTCT
rJMFF013F19+ GCTGATCGGGTTAGTGATTGAACCTCTATAATTTGTATTGCTCTGTGTCAT
rJMFF021G12+ GCTGATCGGGTTAGTGATTGAACCTCTATAATTTGTATTGCTCTGTGTCATTGAATAAGT
____________________________________________________________
consensus GCTGATCGGGTTAGTGATTGAACCTCTATAATTTGTATTGCTCTGTGTCATTGAATAAGT
. : . : . : . : . : . :
rJMFF021G12+ TGAAACAATATATTTATTACATGCGTGCATGCAATATGTTTGCATACATATGCCAAGTTA
____________________________________________________________
consensus TGAAACAATATATTTATTACATGCGTGCATGCAATATGTTTGCATACATATGCCAAGTTA