Contig 001103:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008G14Sequence466003085 (5)ref|XP_009606658.1|9e-09PREDICTED: uncharacterized protein LOC104100978 isoform X1 [Nicotiana tomentosi666001103 (4)ref|XP_011071150.1|229PREDICTED: uncharacterized protein LOC105156648 [Sesamum indicum]
JMFF015E23Sequence222001103 (4)
JMFF021E14Sequence340003085 (5)712001103 (4)ref|XP_011071150.1|220PREDICTED: uncharacterized protein LOC105156648 [Sesamum indicum]
JMFN042K13Sequence625001103 (4)ref|XP_009606659.1|7e-45PREDICTED: uncharacterized protein LOC104100978 isoform X2 [Nicotiana tomentosi

Alignment

This contig is upended


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rJMFF008G14+                                                   ATCCGGGAAGACGAGGGTA
                      ____________________________________________________________
consensus                                                      ATCCGGGAAGACGAGGGTA
 
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rJMFF008G14+          CGCTCATTATCGACAGTCGGATGACATCTTGGCGGATGCCGGGTGGCACTGTAGCTTCTG
rJMFF021E14+                 TATCGACAGTCGGATGACATCTTGGCGGATGCCGGGTGGCACTGTAGCTTCTG
                      ____________________________________________________________
consensus             CGCTCATTATCGACAGTCGGATGACATCTTGGCGGATGCCGGGTGGCACTGTAGCTTCTG
 
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rJMFF008G14+          CTTCCGCCAAATCAACGAATTCATCTTCAAGATGAAAGCTTACAGCCATTTCGACAGAGT
JMFN042K13-                                           TGAAAGCTTACAGCCATTTCGACAGAGT
rJMFF021E14+          CTTCCGCCAAATCAACGAATTCATCTTCAAGATGAAAGCTTACAGCCATTTCGACAGAGT
                      ____________________________________________________________
consensus             CTTCCGCCAAATCAACGAATTCATCTTCAAGATGAAAGCTTACAGCCATTTCGACAGAGT
 
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rJMFF008G14+          GAGATTCTCTCACTTCCTCAACCCGAAACGAATCCAGAGAGTAATATGCAAAGGGGCCGA
JMFN042K13-           GAGATTCTCTCACTTCCTCAACCCGAAACGAATCCAGAGAGTAATATGCAAAGGGGCCGA
rJMFF021E14+          GAGATTCTCTCACTTCCTCAACCCGAAACGAATCCAGAGAGTAATATGCAAAGGGGCCGA
                      ____________________________________________________________
consensus             GAGATTCTCTCACTTCCTCAACCCGAAACGAATCCAGAGAGTAATATGCAAAGGGGCCGA
 
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rJMFF008G14+          CCTGTTCGATATGCTCCCCGAGGAGTACACATTCCGGGAAATCATCGGGAAAATGGGACC
JMFN042K13-           CCTGTTCGATATGCTCCCCGAGGAGTACACATTCCGGGAAATCATCGGGAAAATGGGACC
rJMFF021E14+          CCTGTTCGATATGCTCCCCGAGGAGTACACATTCCGGGAAATCATCGGGAAAATGGGACC
                      ____________________________________________________________
consensus             CCTGTTCGATATGCTCCCCGAGGAGTACACATTCCGGGAAATCATCGGGAAAATGGGACC
 
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rJMFF008G14+          CATACCCCATTCATACTCCGCCGTTCATCTCCCATCCTACCTCCTCGAGAACGCCCACAA
JMFN042K13-           CATACCCCATTCATACTCCGCCGTTCATCTCCCATCCTACCTCCTCGAGAACGCCCACAA
rJMFF021E14+          CATACCCCATTCATACTCCGCCGTTCATCTCCCATCCTACCTCCTCGAGAACGCCCACAA
                      ____________________________________________________________
consensus             CATACCCCATTCATACTCCGCCGTTCATCTCCCATCCTACCTCCTCGAGAACGCCCACAA
 
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rJMFF008G14+          GTATAAATTCCTATTGCCCGGGAACTGTATGAGAGAAAACAACGTATCCGAAAGCTGAGC
JMFN042K13-           GTATAAATTCCTATTGCCCGGGAACTGTATGAGAGAAAACAACGTATCCGAAAGCTGAGC
rJMFF021E14+          GTATAAATTCCTATTGCCCGGGAACTGTATGAGAGAAAACAACGTATCCG-AAGCTGAGC
                      ____________________________________________________________
consensus             GTATAAATTCCTATTGCCCGGGAACTGTATGAGAGAAAACAACGTATCCGAAAGCTGAGC
 
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rJMFF008G14+          CCAAAGCTTTATCCCGTCAAGTTCATAGGTGCAGCAGCTCGCACTGCTACTAGCGAAGCA
JMFN042K13-           CCAAAGCTTTATCCCGTCAAGTTCATAGGTGCAGCAGCTCGCACTGCTACTAGCGAAGCA
rJMFF021E14+          CCAAAGCTTTATCCCGTCAAGTTCATAGGTGCAGCAGCTCGCACTGCTACTAGCGAAGCA
                      ____________________________________________________________
consensus             CCAAAGCTTTATCCCGTCAAGTTCATAGGTGCAGCAGCTCGCACTGCTACTAGCGAAGCA
 
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rJMFF008G14+          TTATTTTGCGTGGACATCTCTGCCCCCGAATCTACCGACTGCAACCTCATTCCATGGACG
JMFN042K13-           TTATTTTGCGTGGACATCTCTGCCCCCGAATCTACCGACTGCAACCTCATTCCATGGACG
rJMFF021E14+          TTATTTTGCGTGGACATCTCTGCCCCCGAATCTACCGACTGCAACCTCATTCCATGGACG
                      ____________________________________________________________
consensus             TTATTTTGCGTGGACATCTCTGCCCCCGAATCTACCGACTGCAACCTCATTCCATGGACG
 
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rJMFF008G14+          ATACAAAAACGCTTTGGCGGGTTCTTGGAAGCGAAAATTTTGTACACAATTTGTAAGAGG
JMFN042K13-           ATACAAAAACGCTTTGGCGGGTTCTTGGAAGCGAAAATTTTGTACACAATTTGTAAGAGG
rJMFF015E23+                   CGCTTTGGCGGGTTCTTGGAAGCGAAAATTTNGTACACAATTTGTAAGAGG
rJMFF021E14+          ATACAAAAACGCTTTGGCGGGTTCTTGGAAGCGAAAATTTTGTACACAATTTGTAAGAGG
                      ____________________________________________________________
consensus             ATACAAAAACGCTTTGGCGGGTTCTTGGAAGCGAAAATTTTGTACACAATTTGTAAGAGG
 
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rJMFF008G14+          GATGACCATTACAGAGTGTTATGATGTTCATTTGCTGTGGCCATATATACAGATTATGGC
JMFN042K13-           GATGACCATTACAGAGTGTTATGATGTTCATTTGCTGTGGCCATATATACAGATTATGGC
rJMFF015E23+          GATGACCANTACAGAGTGTTANGATGTTCATTTGCTGTGGCCATATATACAGATTATGGC
rJMFF021E14+          GATGACCATTACAGAGTGTTATGATGTTCATTTGCTGTGGCCATATATACAGATTATGGC
                      ____________________________________________________________
consensus             GATGACCATTACAGAGTGTTATGATGTTCATTTGCTGTGGCCATATATACAGATTATGGC
 
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rJMFF008G14+          TCTTGGGGGAACTATATATATCACTTGTGTGACAACTTTTGGTTGGT             
JMFN042K13-           TCTTGGGGGAACTATATATATCACTTGTGTGACAACTTTTGGTTGGTTTGAATCTGTTTT
rJMFF015E23+          TCTTGGGGGAACTATATATATCACTNGTGTGACAACTTTTGGTTGGTTTGAATCTGTTTT
rJMFF021E14+          TCTTGGGGGAACTATATATATCACTTGTGTGACAACTTTTGGTTGGTTTGAATCTGTTTT
                      ____________________________________________________________
consensus             TCTTGGGGGAACTATATATATCACTTGTGTGACAACTTTTGGTTGGTTTGAATCTGTTTT
 
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JMFN042K13-           CTGGTGTTCATTCAACTGGATGATTAGGCTATTATTATTATTATGTAGTAA         
rJMFF015E23+          CTGGTGTTCATTCAACTGGATGATTAGGNTANTANTATTANCATGTAGTAA         
rJMFF021E14+          CTGGTGTTCATTCAACTGGATGATTAGGCTATTATTATTATTATGTAGTAATTGATCACC
                      ____________________________________________________________
consensus             CTGGTGTTCATTCAACTGGATGATTAGGCTATTATTATTATTATGTAGTAATTGATCACC