Contig 001096:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019F14Sequence367009223 (4)738001096 (4)emb|CDO97889.1|2e-12unnamed protein product [Coffea canephora]
JMSF009I22Sequence291009223 (4)781001096 (4)ref|XP_006342964.1|5e-39PREDICTED: casein kinase I isoform delta-like [Solanum tuberosum]
JMSF029E15Sequence605009223 (4)gb|AFK44603.1|4e-19unknown [Lotus japonicus]784001096 (4)ref|XP_006342964.1|5e-39PREDICTED: casein kinase I isoform delta-like [Solanum tuberosum]
JMSF030K06Sequence214009223 (4)743001096 (4)ref|XP_006342964.1|4e-31PREDICTED: casein kinase I isoform delta-like [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF009I22+                                              AATATCAGCAATCACAGCTTCCAA
rJMSF029E15+                                              AATATCAGCAATCACAGCTTCCCA
                      ____________________________________________________________
consensus                                                 AATATCAGCAATCACAGCTTCCCA
 
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rJMSF009I22+          GTCCTCCATCTTGTGGTCATGGTGGTATTGGTGCAACAAGTTCAGGGATGCCACATACTG
rJMSF029E15+          GTCCTCCATCTTGTGGTCATGGTGGTATTGGTGCAACAAGTTCAGGGATGCCACATACTG
rJMSF030K06+                                                     AGGGATGCCACATACTG
                      ____________________________________________________________
consensus             GTCCTCCATCTTGTGGTCATGGTGGTATTGGTGCAACAAGTTCAGGGATGCCACATACTG
 
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rJMSF009I22+          CTGCTAATGTTGATAAGCAAACAGGTGGTGAGGAAGGCCTACCCACTGGTTGGTCTTCAG
rJMSF029E15+          CTGCTAATGTTGATAAGCAAACAGGTGGTGAGGAAGGCCTACCCACTGGTTGGTCTTCAG
rJMSF030K06+          CTGCTAATGTTGATAAGCAAACAGGTGGTGAGGAAGGCCTACCCACTGGTTGGTCTTCAG
                      ____________________________________________________________
consensus             CTGCTAATGTTGATAAGCAAACAGGTGGTGAGGAAGGCCTACCCACTGGTTGGTCTTCAG
 
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rJMSF009I22+          GAAATCTGGTCAATAGTAGAAACACGGGATTGGTTTTGAGTTCTGGGAGCAAACAGAAAG
rJMSF029E15+          GAAATCTGGTCAATAGTAGAAACACGGGATTGGTTTTGAGTTCTGGGAGCAAACAGAAAG
rJMSF030K06+          GAAATCTGGTCAATAGTAGAAACACGGGATTGGTTTTGAGTTCTGGGAGCAAACAGAAAG
rJMFF019F14+                                                    CTGGGAGCAAACAGAAAG
                      ____________________________________________________________
consensus             GAAATCTGGTCAATAGTAGAAACACGGGATTGGTTTTGAGTTCTGGGAGCAAACAGAAAG
 
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rJMSF009I22+          GTCCTGTTCATGACTCAACCATGAGTAAAGGGTTGTCTAGTTCAAATATTATCCAATCAA
rJMSF029E15+          GTCCTGTTCATGACTCAACCATGAGTAAAGGGTTGTCTAGTTCAAATATTATCCAATCAA
rJMSF030K06+          GTCCTGTTCATGACTCAACCATGAGTAAAGGGTTGTCTAGTTCAAATATTATCCAATCAA
rJMFF019F14+          GTCCTGTTCATGACTCAACCATGAGTAAAGGGTTGTCTAGTTCAAATATTATCCAATCAA
                      ____________________________________________________________
consensus             GTCCTGTTCATGACTCAACCATGAGTAAAGGGTTGTCTAGTTCAAATATTATCCAATCAA
 
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rJMSF009I22+          GCGGTTCATCAAGGAGACCTGCTGTGTCTAGCATCCGTGATAGTGTGACTGCTGGGGTTG
rJMSF029E15+          GCGGTTCATCAAGGAGACCTGCTGTGTCTAGCATCCGTGATAGTGTGACTGCTGGGGTTG
rJMSF030K06+          GCGGTTCATCAAGGAGACCTGCTGTGTCTAGCATCCGTGATAGTGTGACTGCTGGGGTTG
rJMFF019F14+          GCGGTTCATCAAGGAGACCTGCTGTGTCTAGCATCCGTGATAGTGTGACTGCTGGGGTTG
                      ____________________________________________________________
consensus             GCGGTTCATCAAGGAGACCTGCTGTGTCTAGCATCCGTGATAGTGTGACTGCTGGGGTTG
 
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rJMSF009I22+          AATCTGACCCCTCGCGCACCCGGGCAGCAGATACAACTCATGCAAGCCCTGGAGCTATTC
rJMSF029E15+          AATCTGACCCCTCGCGCACCCGGGCAGCAGATACAACTCATGCAAGCCCTGGAGCTATTC
rJMSF030K06+          AATCTGACCCCTCGCGCACCCGGGCAGCAGATACAACTCATGCAAGCCCTGGAGCTATTC
rJMFF019F14+          AATCTGACCCCTCGCGCACCCGGGCAGCAGATACAACTCATGCAAGCCCTGGAGCTATTC
                      ____________________________________________________________
consensus             AATCTGACCCCTCGCGCACCCGGGCAGCAGATACAACTCATGCAAGCCCTGGAGCTATTC
 
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rJMSF009I22+          CTAAAATGATCAGTACTGCTGAAAGGAGTTCTCCAGTTATATTCGATAACAAATGCAGTT
rJMSF029E15+          CTAAAATGATCAGTACTGCTGAAAGGAGTTCTCCAGTTATATTCGATAACAAATGCAGTT
rJMSF030K06+          CTAAAATGATCAGTACTGCTGAAAGGAGTTCTCCAGTTATATTCGATAACAAATGCAGTT
rJMFF019F14+          CTAAAATGATCAGTACTGCTGAAAGGAGTTCTCCAGTTATATTCGATAACAAATGCAGTT
                      ____________________________________________________________
consensus             CTAAAATGATCAGTACTGCTGAAAGGAGTTCTCCAGTTATATTCGATAACAAATGCAGTT
 
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rJMSF009I22+          CCTCAACTAGAAACAGCAACATTAAAAATATCGAGTCCACTCTTAAAGGTATAGAGGGCC
rJMSF029E15+          CCTCAACTAGAAACAGCAACATTAAAAATATCGAGTCCACTCTTAAAGGTATAGAGGGCC
rJMSF030K06+          CCTCAACTAGAAACAGCAACATTAAAAATATCGAGTCCACTCTTAAAGGTATAGAGGGCC
rJMFF019F14+          CCTCAACTAGAAACAGCAACATTAAAAATATCGAGTCCACTCTTAAAGGTATAGAGGGCC
                      ____________________________________________________________
consensus             CCTCAACTAGAAACAGCAACATTAAAAATATCGAGTCCACTCTTAAAGGTATAGAGGGCC
 
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rJMSF009I22+          TAAGTTTTGGCAATGATGAGAAATCACACTACTAGCTGCTGCTTTTGTCGTGTTCTCCTC
rJMSF029E15+          TAAGTTTTGGCAATGATGAGAAATCACACTACTAGCTGCTGCTTTTGTCGTGTTCTCCTC
rJMSF030K06+          TAAGTTTTGGCAATGATGAGAAATCACACTACTAGCTGCTGCTTTTGTCGTGTTCTCCTC
rJMFF019F14+          TAAGTTTTGGCAATGATGAGAAATCACACTACTAGCTGCTGCTTTTGTCGTGTTCTCCTC
                      ____________________________________________________________
consensus             TAAGTTTTGGCAATGATGAGAAATCACACTACTAGCTGCTGCTTTTGTCGTGTTCTCCTC
 
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rJMSF009I22+          TTAAATACTTGAGAAAGTATGTTGCTTATAGCCCCGGTTTCTTTGAAGAAGCGGTGTGAG
rJMSF029E15+          TTAAATACTTGAGAAAGTATGTTGCTTATAGCCCCGGTTTCTTTGAAGAAGCGGTGTGAG
rJMSF030K06+          TTAAATACTCGAGAAAGTATGTTGCTTATAGCCCCGGTTTCTTTGAAGAAGCGGTGTGAG
rJMFF019F14+          TTAAATACTTGAGAAAGTATGTTGCTTATAGCCCCGGTTTCTTTGAAGAAGCGGTGTGAG
                      ____________________________________________________________
consensus             TTAAATACTTGAGAAAGTATGTTGCTTATAGCCCCGGTTTCTTTGAAGAAGCGGTGTGAG
 
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rJMSF009I22+          CTGAGATTATGAGTACCACATACCAATCAGATCATGCACCAAACAAGTACATAATAAAGA
rJMSF029E15+          CTGAGATTATGAGTACCACATACCAATCAGATCATGCACCAAACAAGTACATAATAAAGA
rJMSF030K06+          CTGAGATTATGAGTACCACATACCAATCAGATCATGCACCAAACAAGTACATAATAAAGA
rJMFF019F14+          CTGAGATTATGAGTACCACATACCAATCAGATCATGCACCAAACAAGTACATAATAAAGA
                      ____________________________________________________________
consensus             CTGAGATTATGAGTACCACATACCAATCAGATCATGCACCAAACAAGTACATAATAAAGA
 
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rJMSF009I22+          TGTCATCATGTTGCTGCCCCCAAAATCAAGGTCCATCTAGGTTATGTTTTGTTAATACTT
rJMSF029E15+          TGTCATCATGTTGCTGCCCCCAAAATCAAGGTCCATCTAGGTTATGTTTTGTTAATACTT
rJMSF030K06+          TGTCATCATGTTGCTGCCCCCAAAATCAAGGTCCATCTAGGTTATGTTTTGTTAATACTT
rJMFF019F14+          TGTCATCATGTTGCTGCCCCCAAAATCAAGGTCCATCTAGGTTATGTTTTGTTAATACTT
                      ____________________________________________________________
consensus             TGTCATCATGTTGCTGCCCCCAAAATCAAGGTCCATCTAGGTTATGTTTTGTTAATACTT
 
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rJMSF009I22+          ATTAC                                                       
rJMSF029E15+          ATTAC                                                       
rJMSF030K06+          ATTACAGTTTTTGAGTTTTGACCTGTTTAGAGTTTTGCATTGTGTTATTCCTTAATACTT
rJMFF019F14+          ATTACAGTTTTTGAGTTTTGACCTGTTTAGAGTTTTGCATTGTGTTATTCCTTAATACTT
                      ____________________________________________________________
consensus             ATTACAGTTTTTGAGTTTTGACCTGTTTAGAGTTTTGCATTGTGTTATTCCTTAATACTT
 
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rJMSF030K06+          AAATAC                                                      
rJMFF019F14+          AAATACAGTTCCCATTTAGACTCAAAATTCCTCTATTCATTTTTACAGTTCTGCATTTGT
                      ____________________________________________________________
consensus             AAATACAGTTCCCATTTAGACTCAAAATTCCTCTATTCATTTTTACAGTTCTGCATTTGT
 
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rJMFF019F14+          GTCATTTCTGATATCATCACTATGAAACTGTGTGATTCTCGGCTTGATTAATTCCAAAGT
                      ____________________________________________________________
consensus             GTCATTTCTGATATCATCACTATGAAACTGTGTGATTCTCGGCTTGATTAATTCCAAAGT