| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF018G13 | Sequence | 574 | 012031 (5) | ref|XP_011095865.1| | 139 | PREDICTED: probable galacturonosyltransferase 4 [Sesamum indicum] ref|XP_0110958 | 659 | 001094 (5) | ref|XP_009610681.1| | 169 | PREDICTED: probable galacturonosyltransferase 4 [Nicotiana tomentosiformis] ref| |
| JMFF040B05 | Sequence | 583 | 012031 (5) | ref|XP_011095865.1| | 131 | PREDICTED: probable galacturonosyltransferase 4 [Sesamum indicum] ref|XP_0110958 | 755 | 001094 (5) | ref|XP_009802392.1| | 5e-79 | PREDICTED: probable galacturonosyltransferase 4 isoform X1 [Nicotiana sylvestri |
| JMSF011C14 | Sequence | 298 | 012031 (5) | 704 | 001094 (5) | ref|XP_009802392.1| | 4e-76 | PREDICTED: probable galacturonosyltransferase 4 isoform X1 [Nicotiana sylvestri | |||
| JMSF025P17 | Sequence | 618 | 012031 (5) | ref|XP_011095865.1| | 137 | PREDICTED: probable galacturonosyltransferase 4 [Sesamum indicum] ref|XP_0110958 | 752 | 001094 (5) | ref|XP_009802392.1| | 1e-99 | PREDICTED: probable galacturonosyltransferase 4 isoform X1 [Nicotiana sylvestri |
| JMSF026A21 | Sequence | 634 | 012031 (5) | ref|XP_011095865.1| | 139 | PREDICTED: probable galacturonosyltransferase 4 [Sesamum indicum] ref|XP_0110958 | 647 | 001094 (5) | ref|XP_009610681.1| | 246 | PREDICTED: probable galacturonosyltransferase 4 [Nicotiana tomentosiformis] ref| |
This contig is upended
. : . : . : . : . : . :
rJMSF025P17+ CTGAAAGGTAAAGTTATTGGTGTGGTCGAGACTTGTGGA
rJMFF040B05+ GAAAGGTAAAGTTATTGGTGTGGTCGAGACTTGTGGA
____________________________________________________________
consensus CTGAAAGGTAAAGTTATTGGTGTGGTCGAGACTTGTGGA
. : . : . : . : . : . :
rJMSF025P17+ GAAAGTTTCCATCGTTTCGATCGGTATCTCAACTTCTCGAATCCTCTTATTTCCAAAAGC
rJMFF040B05+ GAAAGTTTCCATCGTTTCGATCGGTATCTCAACTTCTCGAATCCTCTTATTTCCAAAAGC
rJMSF011C14+ TATTTCCAAAAGC
____________________________________________________________
consensus GAAAGTTTCCATCGTTTCGATCGGTATCTCAACTTCTCGAATCCTCTTATTTCCAAAAGC
. : . : . : . : . : . :
rJMSF025P17+ TTTGACCCTCGTGCTTGTGGGTGGGCATTTGGAATGAATATCTTAGATTTAAGTGAATGG
rJMFF040B05+ TTTGACCCTCGTGCTTGTGGGTGGGCATTTGGAATGAATATCTTAGATTTAAGTGAATGG
rJMSF026A21+ CTCGTGCTTGTGGGTGGGCATTNGGAATGAATATCTTAGATTTAAGTGAATGG
rJMSF011C14+ TTTGACCCTCGTGCTTGTGGGTGGGCATTTGGAATGAATATCTTAGATTTAAGTGAATGG
rJMFF018G13+ G
____________________________________________________________
consensus TTTGACCCTCGTGCTTGTGGGTGGGCATTTGGAATGAATATCTTAGATTTAAGTGAATGG
. : . : . : . : . : . :
rJMSF025P17+ CGGAGGAGAAATATCACCGAGGTGTATCATTCATGGCAGACC-CTGAATAACGATAGACA
rJMFF040B05+ CGGAGGAGAAATATCACCGAGGTGTATCATTCATGGCAGACC-CTGAATAACGATAGACA
rJMSF026A21+ CGGAGGAGAAATATCACCGAGGTGTATCATTCATGGCAGACC-CTGAATAACGATAGACA
rJMSF011C14+ CGGAGGAGAAATATCACCGAGGTGTATCATTCATGGCAGACC-CTGAATAACGATAGACA
rJMFF018G13+ CGGAGGAGAAATATCACCGAGGTGTATCATTCATGGCAGACCNCTGAATAACGATAGACA
____________________________________________________________
consensus CGGAGGAGAAATATCACCGAGGTGTATCATTCATGGCAGACC-CTGAATAACGATAGACA
. : . : . : . : . : . :
rJMSF025P17+ GTTGTGGAAGTTGGGAACCCTCCCA-CCCGGTTTGATTACCTTTTGGAATCATACATACG
rJMFF040B05+ GTTGTGGAAGTTGGGAACCCTCCCACCCCGGTTTGATTACCTTTTGGAATCATACATACG
rJMSF026A21+ GTTGTGGAAGTTGGGAACCCTCCCA-CCCGGTTTGATTACCTTTTGGAATCATACATACG
rJMSF011C14+ GTTGTGGAAGTTGGGAACCCTCCCA-CCCGGTTTGATTACCTTTTGGAATCATACATACG
rJMFF018G13+ GTTGTGGAAGTTGGGAACCCTCCCA-CCCGGTTTGATTACCTTTNGGAATCATACATACG
____________________________________________________________
consensus GTTGTGGAAGTTGGGAACCCTCCCA-CCCGGTTTGATTACCTTTTGGAATCATACATACG
. : . : . : . : . : . :
rJMSF025P17+ CTCTTGATCGATCCTGGCACGTCTTGGGCCTTGGCTACAATCCGAATGTAAGGCAGAAGG
rJMFF040B05+ CTCTTGATCGATCCTGGCACGTCTTGGGCCTTGGCTACAATCCGAATGTAAGGCAGAAGG
rJMSF026A21+ CTCTTGATCGATCCTGGCACGTCTTGGGCCTTGGCTACAATCCGAATGTAAGGCAGAAGG
rJMSF011C14+ CTCTTGATCGATCCTGGCACGTCTTGGGCCTTGGCTACAATCCGAATGTAAGGCAGAAGG
rJMFF018G13+ CTCTTGATCGATCCTGGCACGTCTTGGGCCTTGGCTACAATCCGAATGTAAGGCAGAAGG
____________________________________________________________
consensus CTCTTGATCGATCCTGGCACGTCTTGGGCCTTGGCTACAATCCGAATGTAAGGCAGAAGG
. : . : . : . : . : . :
rJMSF025P17+ ATATTGAAAGAGCGGCGGTGATACACTATAATGGTAACTTGAAGCCTTGGCTCGAGATTA
rJMFF040B05+ ATATTGAAAGAGCGGCGGTGATACACTATAATGGTAACTTGAAGCCTTGGCTCGAGATTA
rJMSF026A21+ ATATTGAAAGAGCGGCGGTGATACACTATAATGGTAACTTGAAGCCTTGGCTCGAGATTA
rJMSF011C14+ ATATTGAAAGAGCGGCGGTGATACACTATAATGGTAACTTGAAGCCTTGGCTCGAGATTA
rJMFF018G13+ ATATTGAAAGAGCGGCGGTGATACACTATAATGGTAACTTGAAGCCTTGGCTCGAGATTA
____________________________________________________________
consensus ATATTGAAAGAGCGGCGGTGATACACTATAATGGTAACTTGAAGCCTTGGCTCGAGATTA
. : . : . : . : . : . :
rJMSF025P17+ GCATCCCAAAGTTCCGAAACTACTGGTCAAGATTTATTGAATATGATCAAGTATTTTTGC
rJMFF040B05+ GCATCCCAAAGTTCCGAAACTACTGGTCAAGATTTATTGAATATGATCAAGTATTTTTGC
rJMSF026A21+ GCATCCCAAAGTTCCGAAACTACTGGTCAAGATTTATTGAATATGATCAAGTATTTTTGC
rJMSF011C14+ GCATCCCAAAGTTCCGAAACTACTGGTCAAGATTTATTGAATATGATCAAGTATTTTTGC
rJMFF018G13+ GCATCCCAAAGTTCCGAAACTACTGGTCAAGATTTATTGAATATGATC-AGTATTTTTGC
____________________________________________________________
consensus GCATCCCAAAGTTCCGAAACTACTGGTCAAGATTTATTGAATATGATCAAGTATTTTTGC
. : . : . : . : . : . :
rJMSF025P17+ GAGAGTGCAACCTTAATTCTTTAAGCGGCAGTTGAAGTTTCTCATTCGTCGTTTCATTCT
rJMFF040B05+ GAGAGTGCAACCTTAATTCTTTAAGCGGCAGTTGAAGTTTCTCATTCGTCGTTTCATTCT
rJMSF026A21+ GAGAGTGCAACCTTAATTCTTTAAGCGGCAGTTGAAGTTTCTCATTCGTCGTTTCATTCT
rJMSF011C14+ GAGAGTGCAACCTTAATTCTTTAAGCGGCAGTTGAAGTTTCTCATTCGTCGTTTCATTCT
rJMFF018G13+ GAGAGTGCAACCTTAATTCTTTAAGCGGCAGTTGAAGTTTCTCATTCGTCGTTTCATTCT
____________________________________________________________
consensus GAGAGTGCAACCTTAATTCTTTAAGCGGCAGTTGAAGTTTCTCATTCGTCGTTTCATTCT
. : . : . : . : . : . :
rJMSF025P17+ TAACTGCTGTCACCGTTTACTTTCCAGGTCCATTCTCCTCTCTTCTCTTCTTTCACCTTA
rJMFF040B05+ TAACTGCTGTCACCGTTTACTTTCCAGGTCCATTCTCCTCTCTTCTCTTCTTTCACCTTA
rJMSF026A21+ TAACTGCTGTCACCGTTTACTTTCCAGTTCCATTCTCCTCTCTTCTCTTCTTTCACCTTA
rJMSF011C14+ TAACTGCTGTCACCGTTTACTTTCCAGGTCCATTCTCCTCTCTTCTCTTCTTTCACCTTA
rJMFF018G13+ TAACTGCTGTCACCGTTTACTTTCCAGGTCCATTCTCCTCTCTTCTCTTCTTTCACCTTA
____________________________________________________________
consensus TAACTGCTGTCACCGTTTACTTTCCAGGTCCATTCTCCTCTCTTCTCTTCTTTCACCTTA
. : . : . : . : . : . :
rJMSF025P17+ GTGCACTACTCCCGGATTTTCCTCTTTTTTGTAAGTCGATTTTTTAGGTATATATTTGGT
rJMFF040B05+ GTGCACTACTCCCGGATTTTCCTCTTTTTTGTAAGTCGATTTTTTAGGTATATATTTGGT
rJMSF026A21+ GTGCACTACTCCCGGATTTTCCTCTTTTTTGTAAGTCGATTTTTTAGGTATATATTTGGT
rJMSF011C14+ GTGCACTACTCCCGGATTTTCCTCTTTTTTGTAAGTCGATTTTTTAGGTATATATTTGGT
rJMFF018G13+ GTGCACTACTCCCGGATTTTCCTCTTTTTTGTAAGTCGATTTTTTAGGTATATATTTGGT
____________________________________________________________
consensus GTGCACTACTCCCGGATTTTCCTCTTTTTTGTAAGTCGATTTTTTAGGTATATATTTGGT
. : . : . : . : . : . :
rJMSF025P17+ AAGTGGAGGATTAGAGTTAGCGGGATAATTTGTACTTGCAATATGTTTGTTATGGTCATT
rJMFF040B05+ AAGTGGAGGATTAGAGTTAGCGGGATAATTTGTACTTGCAATATGTTTGTTATGGTCATT
rJMSF026A21+ AAGTGGAGGATTAGAGTTAGCGGGATAATTTGTACTTGCAATATGTTTGTTATGGTCATT
rJMSF011C14+ AAGTGGAGGATTAGAGTTAGCGGGATAATTTGTACTTGCAATATGTTTGTTATGGTCATT
rJMFF018G13+ AAGTGGAGGATTAGAGTTAGCGGGATAATTTGTACTTGCAATATGTTTGTTATGGTCATT
____________________________________________________________
consensus AAGTGGAGGATTAGAGTTAGCGGGATAATTTGTACTTGCAATATGTTTGTTATGGTCATT
. : . : . : . : . : . :
rJMSF025P17+ GTTTGGCTAGTGCTTAGGTGCCAATGTATTTGTAAATGATTAAGCAGTCCATTCT
rJMFF040B05+ GTTTGGCTAGTGCTTAGGTGCCAATGTATTTGTAAATGATTAAGCAGTCCATTCTT
rJMSF026A21+ GTTTGGCTAGTGCTTAGGTGCCAATGTATTTGTAAATGATTAAGCAGTCCATTCTT
rJMSF011C14+ GTTTGGCTAGTGCTTAGGTGCCAATGTATTTGTAAATGATTAAGCAGTCCATTCTTTTTC
rJMFF018G13+ GTTTGGCTAGTGCTTAGGTGCCAATGTATTTGTAAATGATTAAGCAGTCCATTCTTTTTC
____________________________________________________________
consensus GTTTGGCTAGTGCTTAGGTGCCAATGTATTTGTAAATGATTAAGCAGTCCATTCTTTTTC
. : . : . : . : . : . :
rJMSF011C14+ TACTTTTCTTGTTTTATACTGAAAATACATT
rJMFF018G13+ TACTTTTCTTGTTTTATACTGAAAATACATTGCATTTGTGCAAATGTGAACTATAGAAGC
____________________________________________________________
consensus TACTTTTCTTGTTTTATACTGAAAATACATTGCATTTGTGCAAATGTGAACTATAGAAGC