Contig 001092:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF017K15+                                                                     C
                      ____________________________________________________________
consensus                                                                        C
 
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rJMSF029O07+                                                CTGCAGTATCGCCAAAAGAAAG
rJMFF017K15+          AGACAAGGTATCCGTCAGAGCGTAGTTATAGTGGTCCACTGCAGTATCGCCAAAAGAAAG
                      ____________________________________________________________
consensus             AGACAAGGTATCCGTCAGAGCGTAGTTATAGTGGTCCACTGCAGTATCGCCAAAAGAAAG
 
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rJMSF029O07+          ATAGTGATACTTCTGAAGGAGCTGTTGTCCAACGCAAGGGACGCTTCAAAGTCACTTCAG
rJMFF017K15+          ATAGTGATACTTCTGAAGGAGCTGTTGTCCAACGCAAGGGACGCTTCAAAGTCACTTCAG
                      ____________________________________________________________
consensus             ATAGTGATACTTCTGAAGGAGCTGTTGTCCAACGCAAGGGACGCTTCAAAGTCACTTCAG
 
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rJMSF029O07+          CAGATCTGAGTCCAAAGGGTCCTACAAACAGTTTCTTCAACTCAGCTTCTGGAGGTTTGA
rJMFF017K15+          CAGATCTGAGTCCAAAGGGTCCTACAAACAGTTTCTTCAACTCAGCTTCTGGAGGTTTGA
                      ____________________________________________________________
consensus             CAGATCTGAGTCCAAAGGGTCCTACAAACAGTTTCTTCAACTCAGCTTCTGGAGGTTTGA
 
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rJMSF029O07+          CTGCTGCAACTGCTTCAGGCCTAACAGCTACCTCAGTTCTCCCATCACTGCAATGCATTT
rJMFF017K15+          CTGCTGCAACTGCTTCAGGCCTAACAGCTACCTCAGTTCTCCCATCACTGCAATGCATTT
                      ____________________________________________________________
consensus             CTGCTGCAACTGCTTCAGGCCTAACAGCTACCTCAGTTCTCCCATCACTGCAATGCATTT
 
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rJMSF029O07+          TTCAGCAAAATACATTGCAAAGAGAAGAAATCATTAGATTGATCAAGTATGTGGAGCAAA
rJMFF017K15+          TTCAGCAAAATACATTGCAAAGAGAAGAAATCATTAGATTGATCAAGTATGTGGAGCAAA
                      ____________________________________________________________
consensus             TTCAGCAAAATACATTGCAAAGAGAAGAAATCATTAGATTGATCAAGTATGTGGAGCAAA
 
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rJMSF029O07+          CATCTGTCACCCCTATGGAGTTGGTTGAGTCGGGGACAACTGACCTTTCACAGATCCCTT
rJMFF017K15+          CATCTGTCACCCCTATGGAGTTGGTTGAGTCGGGGACAACTGACCTTTCACAGATCCCTT
                      ____________________________________________________________
consensus             CATCTGTCACCCCTATGGAGTTGGTTGAGTCGGGGACAACTGACCTTTCACAGATCCCTT
 
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rJMSF029O07+          CTACTTCTACAAGAGAGAAAGAGCTGCTGTCCCAGGTGATTCAATTGCAACAAAGCATTG
rJMFF017K15+          CTACTTCTACAAGAGAGAAAGAGCTGCTGTCCCAGGTGATTCAATTGCAACAAAGCATTG
                      ____________________________________________________________
consensus             CTACTTCTACAAGAGAGAAAGAGCTGCTGTCCCAGGTGATTCAATTGCAACAAAGCATTG
 
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rJMSF029O07+          GGAGCCTGGTTGAACAGTTGCAGAGACAAAAGATAAAAAATGTTCAGTTGGAAAGCAAAT
rJMFF017K15+          GGAGCCTGGTTGAACAGTTGCAGAGNCAAAAGATAAAAAATGTTCAGTTGGAAAGCAAAT
                      ____________________________________________________________
consensus             GGAGCCTGGTTGAACAGTTGCAGAGACAAAAGATAAAAAATGTTCAGTTGGAAAGCAAAT
 
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rJMSF029O07+          TGAATGCATTGCTCAGAAAATAGTCCTAGTTATGAAAAGCTGAGTCTCAATACTGGGTGG
rJMFF017K15+          TGAATGCATTGCTCAGAAAATAGTCCTAGTTATGAAAAGCTGAGTCTCAATACTGGGTGG
                      ____________________________________________________________
consensus             TGAATGCATTGCTCAGAAAATAGTCCTAGTTATGAAAAGCTGAGTCTCAATACTGGGTGG
 
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rJMSF029O07+          TGAATCATGAATGGCGGTTTGCAGGCTTCAAGTTTGTGTCCGTCTCAATATTCCTAGGTA
rJMFF017K15+          TGAATCATGAATGGCGGTTTGCAGGCTTCAAGTTTGTGTCCGTCTCAATATTCCTAGGTA
                      ____________________________________________________________
consensus             TGAATCATGAATGGCGGTTTGCAGGCTTCAAGTTTGTGTCCGTCTCAATATTCCTAGGTA
 
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rJMSF029O07+          GTGCAATCAATTTTTTGTGTATCATATTTGTGAATATAAGGCTGGAACCGAAATTTTGAT
rJMFF017K15+          GTGCAATCACTTTTTTGTGTATCATATTTGTGAATATAAGGCTGGAACCGAAATTTTGAT
                      ____________________________________________________________
consensus             GTGCAATCACTTTTTTGTGTATCATATTTGTGAATATAAGGCTGGAACCGAAATTTTGAT
 
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rJMSF029O07+          ATGCTATTGCATTTGTTGCAATATATTCTGTCGTGTTGTAATTTTATTTATTTAGCTTTA
rJMFF017K15+          ATGCTATTGCATTTGTTGCAATATATTCTGTCGTGTTGTAATTTTATTTATTTAGCTTTA
                      ____________________________________________________________
consensus             ATGCTATTGCATTTGTTGCAATATATTCTGTCGTGTTGTAATTTTATTTATTTAGCTTTA
 
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rJMSF029O07+          CTCTAGCCTTCTAAATTCTCTGCAACATAAATTTTGTGAGACCAAC              
rJMFF017K15+          CTCTAGCCTTCTAAATTCTCTGCAACATAAATTTTGTGAGACCAACCTGGTTTTCTTTTA
                      ____________________________________________________________
consensus             CTCTAGCCTTCTAAATTCTCTGCAACATAAATTTTGTGAGACCAACCTGGTTTTCTTTTA