Contig 001083:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015L14Sequence478001083 (2)ref|XP_009776543.1|57.4PREDICTED: uncharacterized protein LOC104226288 [Nicotiana sylvestris]637001083 (2)ref|XP_009776543.1|60.5PREDICTED: uncharacterized protein LOC104226288 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF015L14- TTATTTCTGATATGATTGGGTAGAATATAATTATGTG
                      ____________________________________________________________
consensus TTATTTCTGATATGATTGGGTAGAATATAATTATGTG
 
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rJMFF015L14- TTTTAGGGGGCAGACTTGGATGCATCAACAGCTAAACAAACTCTAACGGCTTGCTCGACA
                      ____________________________________________________________
consensus TTTTAGGGGGCAGACTTGGATGCATCAACAGCTAAACAAACTCTAACGGCTTGCTCGACA
 
. : . : . : . : . : . :
JMFF015L14+ TTGCCTTTGAGTGCCTTAGTG
rJMFF015L14- TCCTCGTTCAATTTCATAGCCGCAGCCACGTCTTCCTTCTTGCCTTTGAGTGCCTTAGTG
                      ____________________________________________________________
consensus TCCTCGTTCAATTTCATAGCCGCAGCCACGTCTTCCTTCTTGCCTTTGAGTGCCTTAGTG
 
. : . : . : . : . : . :
JMFF015L14+ CAGCCAGTAACGCTTGTTAGTGCTGCTGAGATTTCGAAGTTCAAGGTACCATCCTTGTTT
rJMFF015L14- CAGCCAGTAACGCTTGTTAGTGCTGCTGAGATTTCGAAGTTCAAGGTACCATCCTTGTTT
                      ____________________________________________________________
consensus CAGCCAGTAACGCTTGTTAGTGCTGCTGAGATTTCGAAGTTCAAGGTACCATCCTTGTTT
 
. : . : . : . : . : . :
JMFF015L14+ CCATCGCGAGCTGTNTTCAAGCACTCCTTCAATTTGTCTTCTGTGTGTTTGTAGGACTCT
rJMFF015L14- CCATCGCGAGCTGTCTTCAAGCACTCCTTCAATTTGTCTTCTGTGTGTTTGTAGGACTCT
                      ____________________________________________________________
consensus CCATCGCGAGCTGTCTTCAAGCACTCCTTCAATTTGTCTTCTGTGTGTTTGTAGGACTCT
 
. : . : . : . : . : . :
JMFF015L14+ TTGCACGCGGGGCCTCCTGACGTACTGGCCTTAGCCACTACATTCAAAGCCTCATTTATG
rJMFF015L14- TTGCACGCGGGGCCTCCTGACGTACTGGCCTTAGCCACTACATTCAAAGCCTCATTTATG
                      ____________________________________________________________
consensus TTGCACGCGGGGCCTCCTGACGTACTGGCCTTAGCCACTACATTCAAAGCCTCATTTATG
 
. : . : . : . : . : . :
JMFF015L14+ ACTTTGGTTATTGCCTCATCCCAATTTGTTGCACCCTTCGCCATTTTCTCACAACGCGGT
rJMFF015L14- ACTTTGGTTATTGCCTCATCCCAATTTGTTGCACCCTTCGCCATTTTCTCACAACGCGGT
                      ____________________________________________________________
consensus ACTTTGGTTATTGCCTCATCCCAATTTGTTGCACCCTTCGCCATTTTCTCACAACGCGGT
 
. : . : . : . : . : . :
JMFF015L14+ TTGTCCAGGGCGGTGCCACAGAATTTGTTTGAGGCATCGGCATGAATGACAATGGTTNTC
rJMFF015L14- TTGTCCAGGGCGGTGCCACAGAATTTGTTTGAGGCATCGGCATGAATGACAATGGTTCTC
                      ____________________________________________________________
consensus TTGTCCAGGGCGGTGCCACAGAATTTGTTTGAGGCATCGGCATGAATGACAATGGTTCTC
 
. : . : . : . : . : . :
JMFF015L14+ AAGGTTAGATAGGCCACAGACAATGCCACAATGCATCTNTTCAAATCCACCATTTTTATT
rJMFF015L14- AAGGTTAGATAGGCCACAGACAATGCCACAATGCATCTCTTCAAATCCACCATTTTTATT
                      ____________________________________________________________
consensus AAGGTTAGATAGGCCACAGACAATGCCACAATGCATCTCTTCAAATCCACCATTTTTATT
 
. : . : . : . : . : . :
JMFF015L14+ TTCTTGGTTTTTTAAGATCAATTATTATTATTTTTATATTTTTTTCTTGGGTTTTCAAGA
rJMFF015L14- TTCTTGGTTTTTTAAGATCAATTATTATTATTTTTATATTTTTTTCTTGGGTTTTCAAGA
                      ____________________________________________________________
consensus TTCTTGGTTTTTTAAGATCAATTATTATTATTTTTATATTTTTTTCTTGGGTTTTCAAGA
 
. : . : . : . : . : . :
JMFF015L14+ TTTATTATCTGGAATGAAAAATTTTGCCATTTTTTTT
rJMFF015L14- TTTATTATCTGGAATGAAAAATTTTGCCATTTTTTTTTGTTCCANACAGCGATGACTCGA
                      ____________________________________________________________
consensus TTTATTATCTGGAATGAAAAATTTTGCCATTTTTTTTTGTTCCANACAGCGATGACTCGA