Contig 001079:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014F19Sequence740001079 (4)emb|CDP02446.1|1e-78unnamed protein product [Coffea canephora]
JMSF008K04Sequence332000625 (2)809001079 (4)emb|CDP02446.1|4e-97unnamed protein product [Coffea canephora]
JMSF015G06Sequence196000625 (2)787001079 (4)emb|CDP02446.1|4e-97unnamed protein product [Coffea canephora]
JMSF028H07Sequence798001079 (4)emb|CDP02446.1|9e-78unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF015G06+                                       ATCAGACAGGAGAGAACCCGAGATAATATGC
rJMSF028H07+                                       ATCAGACAGGAGAGAACCCGAGATAATATGC
rJMSF008K04+                        ATATGATGGGCCAGNATCAGACAGGAGAGANCCCGAGATAATATGC
                      ____________________________________________________________
consensus                           ATATGATGGGCCAGNATCAGACAGGAGAGAACCCGAGATAATATGC
 
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rJMSF015G06+          AAGCATCTGGATCATATAAACATGTTGGGTCTCAACAAGACTACTTTTCGATTACGGTAT
rJMSF028H07+          AAGCATCTGGATCATATAAACATGTTGGGTCTCANCANGACTACTTTTCGATTACGGTAT
rJMSF008K04+          AAGCATCTGGATCATATAAACATGTTGGGTCTCAACAAGACTACTTTTCGATTACGGTAT
rJMFF014F19+                                                  CTACTTTTCGATTACGGTAT
                      ____________________________________________________________
consensus             AAGCATCTGGATCATATAAACATGTTGGGTCTCAACAAGACTACTTTTCGATTACGGTAT
 
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rJMSF015G06+          CTCGTTAATTGGCTCGTGACCTCGTTGCTGCAATTAAGACTGCCCGGTTCAAACGGAGAG
rJMSF028H07+          CTCGTTAATTGGCTCGTGACCTCGTTGCTGCAATTAAGACTGCCCGGTTCAAACGGAGAG
rJMSF008K04+          CTCGTTAATTGGCTCGTGACCTCGTTGCTGCAATTAAGACTGCCCGGTTCAAACGGAGAG
rJMFF014F19+          CTCGTTAATTGGCTCGTGACCTCGTTGCTGCAATTAAGACTGCCCGGTTCAAACGGAGAG
                      ____________________________________________________________
consensus             CTCGTTAATTGGCTCGTGACCTCGTTGCTGCAATTAAGACTGCCCGGTTCAAACGGAGAG
 
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rJMSF015G06+          AACAGTGTATCACTTGTTCACATCTATGGACCCAAAATAAAATACGAGAGAGGTGCAGCT
rJMSF028H07+          AACAGTGTATCACTTGTTCACATCTATGGACCCAAAATAAAAT-CGAGAGAGGTGCAGCT
rJMSF008K04+          AACAGTGTATCACTTGTTCACATCTATGGACCCAAAATAAAATACGAGAGAGGTGCAGCT
rJMFF014F19+          AACAGTGTATCACTTGTTCACATCTATGGACCCAAAATAAAATACGAGAGAGGTGCAGCT
                      ____________________________________________________________
consensus             AACAGTGTATCACTTGTTCACATCTATGGACCCAAAATAAAATACGAGAGAGGTGCAGCT
 
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rJMSF015G06+          GTTGCTTTCAATGTGAGAAACAGCAATCGGGGTCTTATAAGACCAGAAGTTGTGCAGAAA
rJMSF028H07+          GTTGCTTTCAATGTGAGAAACAGCAATCGGGGTCTTATAAGACCAGAAGTTGTGCAGAAA
rJMSF008K04+          GTTGCTTTCAATGTGAGAAACAGCAATCGGGGTCTTATAAGACCAGAAGTTGTGCAGAAA
rJMFF014F19+          GTTGCTTTCAATGTGAGAAACAGCAATCGGGGTCTTATAAGACCAGAAGTTGTGCAGAAA
                      ____________________________________________________________
consensus             GTTGCTTTCAATGTGAGAAACAGCAATCGGGGTCTTATAAGACCAGAAGTTGTGCAGAAA
 
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rJMSF015G06+          CTGGCCGATATGCACGGTATTTATCTCGGCATTGGCATCCTCAGTCACATTCGGATTCTC
rJMSF028H07+          CTGGCCGATATGCACGGTATTTATCTCGGCATTGGCATCCTCAGTCACATTCGGATTCTC
rJMSF008K04+          CTGGCCGATATGCACGGTATTTATCTCGGCATTGGCATCCTCAGTCACATTCGGATTCTC
rJMFF014F19+          CTGGCCGATATGCACGGTATTTATCTCGGCATTGGCATCCTCAGTCACATTCGGATTCTC
                      ____________________________________________________________
consensus             CTGGCCGATATGCACGGTATTTATCTCGGCATTGGCATCCTCAGTCACATTCGGATTCTC
 
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rJMSF015G06+          GATAGTTCAAAACAGCAGCGTGGAGCTTCAAATCTCGAAGTCACAATGGACAATGGCAGG
rJMSF028H07+          GATAGTTCAAAACAGCAGCGTGGAGCTTCAAATCTCGAAGTCACAATGGACAATGGCAGG
rJMSF008K04+          GATAGTTCAAAACAGCAGCGTGGAGCTTCAAATCTCGAAGTCACAATGGACAATGGCAGG
rJMFF014F19+          GATAGTTCAAAACAGCAGCGTGGAGCTTCAAATCTCGAAGTCACAATGGACAATGGCAGG
                      ____________________________________________________________
consensus             GATAGTTCAAAACAGCAGCGTGGAGCTTCAAATCTCGAAGTCACAATGGACAATGGCAGG
 
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rJMSF015G06+          CACGACGCTAAAAGTGGGTTCATCAGAGTCGAGGTCCTCACTGCATCACTCGGCTTCCTT
rJMSF028H07+          CACGACGCTAAAAGTGGGTTCATCAGAGTCGAGGTCCTCACTGCATCACTCGGCTTCCTT
rJMSF008K04+          CACGACGCTAAAAGTGGGTTCATCAGAGTCGAGGTCCTCACTGCATCACTCGGCTTCCTT
rJMFF014F19+          CACGACGCTAAAAGTGGGTTCATCAGAGTCGAGGTCCTCACTGCATCACTCGGCTTCCTT
                      ____________________________________________________________
consensus             CACGACGCTAAAAGTGGGTTCATCAGAGTCGAGGTCCTCACTGCATCACTCGGCTTCCTT
 
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rJMSF015G06+          TCTAACTTCGAAGACGTGTACCAATTGTGGGCTTTCGTGGCTAAATTCCTCAACCCAGAC
rJMSF028H07+          TCTAACTTCGAAGACGTGTACCAATTGTGGGCTTTCGTGGCTAAATTCCTCAACCCAGAC
rJMSF008K04+          TCTAACTTCGAAGACGTGTACCAATTGTGGGCTTTCGTGGCTAAATTCCTCAACCCAGAC
rJMFF014F19+          TCTAACTTCGAAGACGTGTACCAATTGTGGGCTTTCGTGGCTAAATTCCTCAACCCAGAC
                      ____________________________________________________________
consensus             TCTAACTTCGAAGACGTGTACCAATTGTGGGCTTTCGTGGCTAAATTCCTCAACCCAGAC
 
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rJMSF015G06+          TTCATCAAACAAACTCTCCTCCCTACTGTCGAAGAAGAGGCTGACGCTTGAAACCCCGAA
rJMSF028H07+          TTCATCAAACAAACTCTCCTCCCTACTGTCGAAGAAGAGGCTGACGCTTGAAACCCCGAA
rJMSF008K04+          TTCATCAAACAAACTCTCCTCCCTACTGTCGAAGAAGAGGCTGACGCTTGAAACCCCGAA
rJMFF014F19+          TTCATCAAACAAACTCTCCTCCCTACTGTCGAAGAAGAGGCTGACGCTTGAAACCCCGAA
                      ____________________________________________________________
consensus             TTCATCAAACAAACTCTCCTCCCTACTGTCGAAGAAGAGGCTGACGCTTGAAACCCCGAA
 
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rJMSF015G06+          CGCCATTTCAATGCTCGAGCTTTCTTTTGCCGCAGGACAAAGATGCAGAGAAGTGTGTGC
rJMSF028H07+          CGCCATTTCAATGCTCGAGCTTTCTTTTGCCGCAGGACAAAGATGCAGAGAAGTGTGTGC
rJMSF008K04+          CGCCATTTCAATGCTCGAGCTTTCTTTTGCCGCAGGACAAAGATGCAGAGAAGTGTGTGC
rJMFF014F19+          CGCCATTTCAATGCTCGAGCTTTCTTTTGCCGCAGGACAAAGATGCAGAGAAGTGTGTGC
                      ____________________________________________________________
consensus             CGCCATTTCAATGCTCGAGCTTTCTTTTGCCGCAGGACAAAGATGCAGAGAAGTGTGTGC
 
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rJMSF015G06+          TGCCTGGCAAGATTCAAGGTGGATTCTTTAGCAGCACCCTCTGCCTCTTTGATGCATTTT
rJMSF028H07+          TGCCTGGCAAGATTCAAGGTGGATTCTTTAGCAGCACCCTCTGCCTCTTTGATGCATTTT
rJMSF008K04+          TGCCTGGCAAGATTCAAGGTGGATTCTTTAGCAGCACCCTCTGCCTCTTTGATGCATTTT
rJMFF014F19+          TGCCTGGCAAGATTCAAGGTGGATTCTTTAGCAGCACCCTCTGCCTCTTTGATGCATTTT
                      ____________________________________________________________
consensus             TGCCTGGCAAGATTCAAGGTGGATTCTTTAGCAGCACCCTCTGCCTCTTTGATGCATTTT
 
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rJMSF015G06+          AGGATAATTTGTTGATTCTTGTTTTGGTTTCTGATTTTCAGCTTTAATTTTGGGATTCTG
rJMSF028H07+          AGGATAATTTGTTGATTCTTGTTTTGGTTTCTGATTTTCAGCTTTAATTTTGGGATTCTG
rJMSF008K04+          AGGATAATTTGTTGATTCTTGTTTTGGTTTCTGATTTTCAGCTTTAATTTTGGGATTCTG
rJMFF014F19+          AGGATAATTTGTTGATTCTTGTTTTGGTTTCTGATTTTCAGCTTTAATTTTGGGATTCTG
                      ____________________________________________________________
consensus             AGGATAATTTGTTGATTCTTGTTTTGGTTTCTGATTTTCAGCTTTAATTTTGGGATTCTG
 
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rJMSF015G06+          ATGTGGAGTTGGATTTAGGAATTTGTATATCTTT                          
rJMSF028H07+          ATGTGGAGTTGGATTTAGGAATTTGTATATCTTT                          
rJMSF008K04+          ATGTGGAGTTGGATTTAGGAATTTGTATATCTTTAG                        
rJMFF014F19+          ATGTGGAGTTGGATTTAGGAATTTGTATATCTTTAGGTAGTCATGACGAACTAAAGCATA
                      ____________________________________________________________
consensus             ATGTGGAGTTGGATTTAGGAATTTGTATATCTTTAGGTAGTCATGACGAACTAAAGCATA