Contig 001073:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013I21Sequence645001073 (5)gb|EYU33685.1|6e-20hypothetical protein MIMGU_mgv1a016778mg [Erythranthe guttata]619001073 (5)gb|EYU33685.1|5e-20hypothetical protein MIMGU_mgv1a016778mg [Erythranthe guttata]
JMFF032J08Sequence469001073 (5)gb|EYU33685.1|1e-20hypothetical protein MIMGU_mgv1a016778mg [Erythranthe guttata]637001073 (5)gb|EYU33685.1|5e-20hypothetical protein MIMGU_mgv1a016778mg [Erythranthe guttata]
JMFN016G06Sequence524001073 (5)gb|EYU33685.1|2e-20hypothetical protein MIMGU_mgv1a016778mg [Erythranthe guttata]

Alignment

This contig is upended


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JMFF013I21+                                                                   TTTT
                      ____________________________________________________________
consensus                                                                     TTTT
 
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JMFN016G06+                   AGCAAAAAGACATTATTATTTATTATAGGACAACATAATAAGACGTTAAGAA
JMFF013I21+           TTTTTNGAAGCAAAAAGACATTATTATTTATTATAGGACAACATAATAAGACGTTAAGAA
rJMFF032J08-                                   ATTTATTATAGGACAACATAATAAGACGTTAAGAA
rJMFF013I21-                                                   CATAATAAGACGTTAAGAA
                      ____________________________________________________________
consensus             TTTTTNGAAGCAAAAAGACATTATTATTTATTATAGGACAACATAATAAGACGTTAAGAA
 
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JMFN016G06+           ACGCCGAAAGTTGTTTGGCGACGCACGTGAGCACCGTTTCATTGCACAAAAACAAAACAA
JMFF013I21+           ACGCCGAAAGTTGTTTGGCGACGCACGTGAGCACCGTTTCATTGCACAAAAACAAAACAA
rJMFF032J08-          ACGCCGAAAGTTGTTTGGCGACGCACGTGAGCACCGTTTCATTGCACAAAAACAAAACAA
rJMFF013I21-          ACGCCGAAAGTTGTTTGGCGACGCACGTGAGCACCGTTTCATTGCACAAAAACAAAACAA
                      ____________________________________________________________
consensus             ACGCCGAAAGTTGTTTGGCGACGCACGTGAGCACCGTTTCATTGCACAAAAACAAAACAA
 
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JMFN016G06+           AAACATGAAAAGCTTTAGACAAAGACAGGTGGACACCACATTAGGTTGACGGATGAGTCT
JMFF013I21+           AAACATGAAAAGCTTTAGACAAAGACAGGTGGACACCACATTAGGTTGACGGATGAGTCT
rJMFF032J08-          AAACATGAAAAGCTTTAGACAAAGACAGGTGGACACCACATTAGGTTGACGGATGAGTCT
JMFF032J08+                                                               ATGAGTCT
rJMFF013I21-          AAACATGAAAAGCTTTAGACAAAGACAGGTGGACACCACATTAGGTTGACGGATGAGTCT
                      ____________________________________________________________
consensus             AAACATGAAAAGCTTTAGACAAAGACAGGTGGACACCACATTAGGTTGACGGATGAGTCT
 
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JMFN016G06+           CACAAATCACAATAATAGCGAAGATAATGGAAGGAATGTCATACTAGAATGGGGTTTGAG
JMFF013I21+           CACAAATCACAATAATAGCGAAGATAATGGAAGGAATGTCATACTAGAATGGGGTTTGAG
rJMFF032J08-          CACAAATCACAATAATAGCGAAGATAATGGAAGGAATGTCATACTAGAATGGGGTTTGAG
JMFF032J08+           CACAAATCACAATAATAGCGAAGATAATGGAAGGAATGTCATACTAGAATGGGGTTTGAG
rJMFF013I21-          CACAAATCACAATAATAGCGAAGATAATGGAAGGAATGTCATACTAGAATGGGGTTTGAG
                      ____________________________________________________________
consensus             CACAAATCACAATAATAGCGAAGATAATGGAAGGAATGTCATACTAGAATGGGGTTTGAG
 
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JMFN016G06+           CGTTAATTAGCATTGGCGGGGAACCTTAAGGCCACATTTGCCGGGGAGCTTCATGGCCTT
JMFF013I21+           CGTTAATTAGCATTGGCGGGGAACCTTAAGGCCACATTTGCCGGGGAGCTTCATGGCCTT
rJMFF032J08-          CGTTAATTAGCATTGGCGGGGAACCTTAAGGCCACATTTGCCGGGGAGCTTCATGGCCTT
JMFF032J08+           CGTTAATTAGCATTGGCGGGGAACCTTAAGGCCACATTTGCCGGGGAGCTTCATGGCCTT
rJMFF013I21-          CGTTAATTAGCATTGGCGGGGAACCTTAAGGCCACATTTGCCGGGGAGCTTCATGGCCTT
                      ____________________________________________________________
consensus             CGTTAATTAGCATTGGCGGGGAACCTTAAGGCCACATTTGCCGGGGAGCTTCATGGCCTT
 
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JMFN016G06+           TTCAGGGCTGAGACCAAACTTGGCAAGTTGAGGCTTGAGTTTGCACATGCATTTTAAGTC
JMFF013I21+           TTCAGGGCTGAGACCAAACTTGGCGAGTTGAGGCTTGAGTTTGCACATGCATTTTAAGTC
rJMFF032J08-          TTCAGGGCTGAGACCAAACTTGGCGAGTTGAGGCTTGAGTTTGCACATGCATTTTAAGTC
JMFF032J08+           TTCAGGGCTGAGACCAAACTTGGCGAGTTGAGGCTTGAGTTTGCACATGCATTTTAAGTC
rJMFF013I21-          TTCAGGGCTGAGACCAAACTTGGCGAGTTGAGGCTTGAGTTTGCACATGCATTTTAAGTC
                      ____________________________________________________________
consensus             TTCAGGGCTGAGACCAAACTTGGCGAGTTGAGGCTTGAGTTTGCACATGCATTTTAAGTC
 
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JMFN016G06+           AGCGTTGCACAGAACGGTGCAACAGGCCTTGGTGGGATCCTTGGGCGCCGCGCCGCTGAT
JMFF013I21+           AGCGTTGCACAGAACGGTGCAACAGGCCTTGGTGGGATCCTTGGGCGCCGCGCCGCTGAT
rJMFF032J08-          AGCGTTGCACAGAACGGTGCAACAGGCCTTGGTGGGATCCTTGGGCGCCGCGCCGCTGAT
JMFF032J08+           AGCGTTGCACAGAACGGTGCAACAGGCCTTGGTGGGATCCTTGGGCGCCGCGCCGCTGAT
rJMFF013I21-          AGCGTTGCACAGAACGGTGCAACAGGCCTTGGTGGGATCCTTGGGCGCCGCGCCGCTGAT
                      ____________________________________________________________
consensus             AGCGTTGCACAGAACGGTGCAACAGGCCTTGGTGGGATCCTTGGGCGCCGCGCCGCTGAT
 
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JMFN016G06+           CGCCGGCAGACATTCCGCCAGCTCCGTCACTTTCACCTTGCAGATGACGCTTGTTGCCGT
JMFF013I21+           CGCCGGCAGACATTCCGCCAGCTCCGTCACTTTCACCTTGCAGATGACGCTTGTTGCCGT
rJMFF032J08-          CGCCGGCAGACATTCCGCCAGCTCCGTCACTTTCACCTTGCAGATGACGCTTGTTGCCGT
JMFF032J08+           CGCCGGCAGACATTCCGCCAGCTCCGTCACTTTCACCTTGCAGATGACGCTTGTTGCCGT
rJMFF013I21-          CGCCGGCAGACATTCCGCCAGCTCCGTCACTTTCACCTTGCAGATGACGCTTGTTGCCGT
                      ____________________________________________________________
consensus             CGCCGGCAGACATTCCGCCAGCTCCGTCACTTTCACCTTGCAGATGACGCTTGTTGCCGT
 
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JMFN016G06+           CTGGGCATTTGCCACGCCAATCATCACCGCCACCACCACCACACTCAACACC        
JMFF013I21+           CTGGGCATTTGCCACGCCAATCATCACCGCCACCACCACCACACTCAACACCATAAATAA
rJMFF032J08-          CTGGGCATTTGCCACGCCAATCATCACCGCCACCACCACCACACTCAACACCATAAATAA
JMFF032J08+           CTGGGCATTTGCCACGCCAATCATCACCGCCACCACCACCACACTCAACACCATAAATAA
rJMFF013I21-          CTGGGCATTTGCCACGCCAATCATCACCGCCACCACCACCACACTCAACACCATAAATAA
                      ____________________________________________________________
consensus             CTGGGCATTTGCCACGCCAATCATCACCGCCACCACCACCACACTCAACACCATAAATAA
 
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JMFF013I21+           TGACTTATTAGCCATATTATATATGCAAACTAGATCAGATCAGATCGGCCTGTATATATA
rJMFF032J08-          TGACTTATTAGCCATATTATATATGCAAACTAGATCAGATCAGATCGGCCTGTATATATA
JMFF032J08+           TGACTTATTAGCCATATTATATATGCAAACTAGATCAGATCAGATCGGCCTGTATATATA
rJMFF013I21-          TGACTTATTAGCCATATTATATATGCAAACTAGATCAGATCAGATCGGCCTGTATATATA
                      ____________________________________________________________
consensus             TGACTTATTAGCCATATTATATATGCAAACTAGATCAGATCAGATCGGCCTGTATATATA
 
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JMFF013I21+           GTAGTGGTTTATATCTGCAAGACTACAACTGATGATCTGAT                   
rJMFF032J08-          GTAGTGGTTTATATCTGCAAGACTACAACTGATGATCTGATCTGTTCCAGACAGCGATGA
JMFF032J08+           GTAGTGGTTTATATCTGCAAGACTACAACTGATGATCTGAT                   
rJMFF013I21-          GTAGTGGTTTATATCTGCAAGACTACAACTGATGATCTGATCTGTTCCAGACAGCGATGA
                      ____________________________________________________________
consensus             GTAGTGGTTTATATCTGCAAGACTACAACTGATGATCTGATCTGTTCCAGACAGCGATGA