Contig 001071:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006M22Sequence605005971 (3)emb|CBI28189.3|5e-54unnamed protein product [Vitis vinifera]210001071 (3)
JMFF013D07Sequence574005971 (3)ref|XP_004245028.1|6e-82PREDICTED: probable sugar phosphate/phosphate translocator At2g25520 [Solanum l531001071 (3)gb|AFK47238.1|2e-06unknown [Medicago truncatula]
JMFF023K07Sequence536005971 (3)ref|XP_004245028.1|6e-38PREDICTED: probable sugar phosphate/phosphate translocator At2g25520 [Solanum l331001071 (3)

Alignment

This contig is upended


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rJMFF013D07+                   GNGTGGTCAAAGANTGGCTCCTAATCGNGTTTTNGNGGTCGGTAATCAAGG
                      ____________________________________________________________
consensus                      GNGTGGTCAAAGANTGGCTCCTAATCGNGTTTTNGNGGTCGGTAATCAAGG
 
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rJMFF013D07+          NCNCTGTAACTCCGGTCAATTTTTTNGGGTANGGANTGGCTTTTTTGGGAGTTGNGTTTT
                      ____________________________________________________________
consensus             NCNCTGTAACTCCGGTCAATTTTTTNGGGTANGGANTGGCTTTTTTGGGAGTTGNGTTTT
 
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rJMFF013D07+          ATAACCNCTCAAAACTNCNGGCNTTGAAGGNGAAAGAAGCTCAGAAGAAAGCTCAGCAGC
                      ____________________________________________________________
consensus             ATAACCNCTCAAAACTNCNGGCNTTGAAGGNGAAAGAAGCTCAGAAGAAAGCTCAGCAGC
 
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rJMFF013D07+          NGACNGACGAAGAAAGCGGGAAGCTNTTGGGCGAGANCGGCGGNGAGGANCTGGGGAAGA
                      ____________________________________________________________
consensus             NGACNGACGAAGAAAGCGGGAAGCTNTTGGGCGAGANCGGCGGNGAGGANCTGGGGAAGA
 
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rJMFF006M22+                                                            AAAAAAAAAA
rJMFF023K07+                                                            AAAAAAAAAA
rJMFF013D07+          AGGGCGANGCNCNGGCCTAANTTTGTAANTTNGCTNGGNGAAATTCAAGAAAAAAAAAAA
                      ____________________________________________________________
consensus             AGGGCGANGCNCNGGCCTAANTTTGTAANTTNGCTNGGNGAAATTCAAGAAAAAAAAAAA
 
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rJMFF006M22+          TAAGTGTGTTGTGGAAGAAGTACNCAGANTGAGGAGGGATTCCGGCGNTGACNGTCGGTT
rJMFF023K07+          TAAGTGTGTTGTGGAAGAAGTACNCAGATTGAGGAGGGATTCCGGCGTTGACTGTCGGTT
rJMFF013D07+          TAAGTGTGTTGTGGAAGAAGTACACAGATTGAGGAGGGATTCCGGCGTTGACTGTCGGTT
                      ____________________________________________________________
consensus             TAAGTGTGTTGTGGAAGAAGTACACAGATTGAGGAGGGATTCCGGCGTTGACTGTCGGTT
 
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rJMFF006M22+          CCATGTATTTTAGTAGANTTTTAAACTTTTAATNTAAATCANCCTTTTAGGNTNCAGATA
rJMFF023K07+          CCATGTATTTTAGTAGANTTTTAAACTTTTAATNTAAATCANCCTNTTAGGCTGCAGATA
rJMFF013D07+          CCATGTATTTTAGTAGAGTTTTAAACTTTTAATCTAAATCAGCCTCTTAGGCTGCAGATA
                      ____________________________________________________________
consensus             CCATGTATTTTAGTAGAGTTTTAAACTTTTAATCTAAATCAGCCTTTTAGGCTGCAGATA
 
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rJMFF006M22+          AGCTTANTTTCATCTTCCNCAAATTTTGCTNATTTTGTTTTCTTTCTTTTTTTCCTTCTG
rJMFF023K07+          AGCTTATTTTCATCTTCCNCAANTTTTGCTTATTTTGTTTTCTTTCTTTTTTTCCTTCTG
rJMFF013D07+          AGCTTATTTTCATCTTCCACAATTTTTGTTTATTTTGTTTTCTTTCTTTTTTTCCTTCTG
                      ____________________________________________________________
consensus             AGCTTATTTTCATCTTCCACAATTTTTGCTTATTTTGTTTTCTTTCTTTTTTTCCTTCTG
 
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rJMFF006M22+          CCTG                                                        
rJMFF023K07+          CCTGCGTATTAGGAACTGTTTATGATTANGAATTTCTGATTTATAC              
rJMFF013D07+          CCTGTGTATTAGGAACTGTTTATGATATTGAATTTCTGATTTATACAGTTGATTAANAAA
                      ____________________________________________________________
consensus             CCTGTGTATTAGGAACTGTTTATGATTTTGAATTTCTGATTTATACAGTTGATTAANAAA