| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012F07 | Sequence | 423 | 001068 (4) | emb|CDP12942.1| | 7e-58 | unnamed protein product [Coffea canephora] | 746 | 001068 (4) | emb|CDP01851.1| | 5e-68 | unnamed protein product [Coffea canephora] |
| JMSF019G12 | Sequence | 496 | 006487 (2) | ref|XP_009605166.1| | 3e-51 | PREDICTED: aspartic proteinase-like protein 1 [Nicotiana tomentosiformis] | 809 | 001068 (4) | emb|CDP01851.1| | 6e-86 | unnamed protein product [Coffea canephora] |
| JMSF031O11 | Sequence | 678 | 006487 (2) | ref|XP_009767400.1| | 4e-79 | PREDICTED: aspartic proteinase-like protein 1 [Nicotiana sylvestris] | 762 | 001068 (4) | emb|CDP01851.1| | 2e-73 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMFF012F07- GCTTGGAACCGGGAAACATTTCTG
____________________________________________________________
consensus GCTTGGAACCGGGAAACATTTCTG
. : . : . : . : . : . :
JMFF012F07- TACCTAGCACTCTAGCATCCAATGGAATTGCTGCAAAGTCATTTTCTATGTGTTTTGGGC
rJMSF019G12+ CTCTAGCATCCAANGGAATTGCTGCAAAGTCATTTTCTATGTGTTTGGGCC
____________________________________________________________
consensus TACCTAGCACTCTAGCATCCAATGGAATTGCTGCAAAGTCATTTTCTATGTGTTTTGGGC
. : . : . : . : . : . :
JMFF012F07- AAGATGGTGTTGGGAGAATAGTTTTCGGGGACAAAGGCAGTTCAAATCAAGGAGAGACAC
rJMSF031O11+ GGAGAATAGTTTTCGGGGACAAAGGCAGTTCAAATCAAGGAGAGACAC
rJMSF019G12+ AAGATGGTGTTGGGAGAATAGTTTTCGGGGACAAAGGCAGTTCAAATCAAGGAGAGACAC
rJMFF012F07+ AGGCAGTTCAAATCAAGGAGAGACAC
____________________________________________________________
consensus AAGATGGTGTTGGGAGAATAGTTTTCGGGGACAAAGGCAGTTCAAATCAAGGAGAGACAC
. : . : . : . : . : . :
JMFF012F07- CATTTATTCCAACACAATCATTCCCAACGTATAACATCAGCGTTACGCAAATAGCTGTGG
rJMSF031O11+ CATTTATTCCAACACAATCATTCCCAACGTATAACATCAGCGTTACGCAAATAGCTGTGG
rJMSF019G12+ CATTTATTCCAACACAATCATTCCCAACGTATAACATCAGCGTTACGCAAATAGCTGTGG
rJMFF012F07+ CATTTATTCCAACACAATCATTCCCAACGTATAACATCAGCGTTACGCAAATAGCTGTGG
____________________________________________________________
consensus CATTTATTCCAACACAATCATTCCCAACGTATAACATCAGCGTTACGCAAATAGCTGTGG
. : . : . : . : . : . :
JMFF012F07- AGGAAAATGTGACTGATGTTGATTTTACAGCCGTATTTGACTCTGGCACATCCTTCACCT
rJMSF031O11+ AGGAAAATGTGACTGATGTTGATTTTACAGCCGTATTTGACTCTGGCACATCCTTCACCT
rJMSF019G12+ AGGAAAATGTGACTGATGTTGATTTTACAGCCGTATTTGACTCTGGCACATCCTTCACCT
rJMFF012F07+ AGGAAAATGTGACTGATGTTGATTTTACAGCCGTATTTGACTCTGGCACATCCTTCACCT
____________________________________________________________
consensus AGGAAAATGTGACTGATGTTGATTTTACAGCCGTATTTGACTCTGGCACATCCTTCACCT
. : . : . : . : . : . :
JMFF012F07- ATTTAAATGATCCAGCATACACAATCATTACAAAGAATTTCAACTCTTTTGTAAAGGAGC
rJMSF031O11+ ATTTAAATGATCCAGCATACACAATCATTACAAAGAATTTCAACTCTTTTGTAAAGGAGC
rJMSF019G12+ ATTTAAATGATCCAGCATACACAATCATTACAAAGAATTTCAACTCTTTTGTAAAGGAGC
rJMFF012F07+ ATTTAAATGATCCAGCATACACAATCATTACAAAGAATTTCAACTCTTTTGTAAAGGAGC
____________________________________________________________
consensus ATTTAAATGATCCAGCATACACAATCATTACAAAGAATTTCAACTCTTTTGTAAAGGAGC
. : . : . : . : . : . :
JMFF012F07- CACGCAGTCAAGTTGCTTCCAATTCCTCTATTCCTTTCGAGTATTGCTATGACGTAAGTA
rJMSF031O11+ CACGCAGTCAAGTTGCTTCCAATTCCTCTATTCCTTTCGAGTATTGCTATGACGTAAGTA
rJMSF019G12+ CACGCAGTCAAGTTGCTTCCAATTCCTCTATTCCTTTCGAGTATTGCTATGACGTAAGTA
rJMFF012F07+ CACGCAGTCAAGTTGCTTCCAATTCCTCTATTCCTTTCGAGTATTGCTATGACGTAAGTA
____________________________________________________________
consensus CACGCAGTCAAGTTGCTTCCAATTCCTCTATTCCTTTCGAGTATTGCTATGACGTAAGTA
. : . : . : . : . : . :
JMFF012F07- CAAACGAAACTTTCATTCCTAATTTGAATCTAACAATGA
rJMSF031O11+ CAAACGAAACTTTCATTCCTAATTTGAATCTAACAATGAAAGGTGGCGACCAGTTTTATG
rJMSF019G12+ CAAACGAAACTTTCATTCCTAATTTGAATCTAACAATGAAAGGTGGCGACCAGTTTTATG
rJMFF012F07+ CAAACGAAACTTTCATTCCTAATTTGAATCTAACAATGAAAGGTGGCGACCAGTTTTATG
____________________________________________________________
consensus CAAACGAAACTTTCATTCCTAATTTGAATCTAACAATGAAAGGTGGCGACCAGTTTTATG
. : . : . : . : . : . :
rJMSF031O11+ TCGTTGAGCCAATAATACTTTTCTCGGATAAGAATGGTATGTTTGGCTATTGTTTAGCAG
rJMSF019G12+ TCGTTGAGCCAATAATACTTTTCTCGGATAAGAATGGTATGTTTGGCTATTGTTTAGCAG
rJMFF012F07+ TCGTTGAGCCAATAATACTTTTCTCGGATAAGAATGGTATGTTTGGCTATTGTTTAGCAG
____________________________________________________________
consensus TCGTTGAGCCAATAATACTTTTCTCGGATAAGAATGGTATGTTTGGCTATTGTTTAGCAG
. : . : . : . : . : . :
rJMSF031O11+ TTGTCAAAAGTGGGGATATCAACATCATTGGACAAAATTTTATGACCGGCTACCGGGTGG
rJMSF019G12+ TTGTCAAAAGTGGGGATATCAACATCATTGGACAAAATTTTATGACCGGCTACCGGGTGG
rJMFF012F07+ TTGTCAAAAGTGGGGATATCAACATCATTGGACAAAATTTTATGACCGGCTACCGGGTGG
____________________________________________________________
consensus TTGTCAAAAGTGGGGATATCAACATCATTGGACAAAATTTTATGACCGGCTACCGGGTGG
. : . : . : . : . : . :
rJMSF031O11+ TTTTTGACAGCGAGAAGATGGTTTTGGGGTGGGAGCAAGCAGACTGTTACAATGATAAAA
rJMSF019G12+ TTTTTGACAGCGAGAAGATGGTTTTGGGGTGGGAGCAAGCAGACTGTTACAATGATAAAA
rJMFF012F07+ TTTTTGACAGCGAGAAGATGGTTTTGGGGTGGGAGCAAGCAGACTGTTACAATGATAAAA
____________________________________________________________
consensus TTTTTGACAGCGAGAAGATGGTTTTGGGGTGGGAGCAAGCAGACTGTTACAATGATAAAA
. : . : . : . : . : . :
rJMSF031O11+ ACTCAGCAACCGAAGCACCTTCACCTAGCAGTGAGTAGGGTGAGAACAAATCTATCCCCC
rJMSF019G12+ ACTCAGCAACCGAAGCACCTTCACCTAGCAGTGAGTAGGGTGAGAACAAATCTATCCCCC
rJMFF012F07+ ACTCAGCAACCGAAGCACCTTCACCTAGCAGTGAGTAGGGTGAGAACAAATCTATCCCCC
____________________________________________________________
consensus ACTCAGCAACCGAAGCACCTTCACCTAGCAGTGAGTAGGGTGAGAACAAATCTATCCCCC
. : . : . : . : . : . :
rJMSF031O11+ AATAATAGACGGTCCGTCAGAGACTTATGGGTGTTTTTTCATTTTCCTTTTTTCCTATTA
rJMSF019G12+ AATAATAGACGGTCCGTCAGAGACTTATGGGTGTTTTTTCATTTTCCTTTTTTCCTATTA
rJMFF012F07+ AATAATAGACGGTCCGTCAGAGACTTATGGGTGTTTTTTCATTTTCCTTTTTTCCTATTA
____________________________________________________________
consensus AATAATAGACGGTCCGTCAGAGACTTATGGGTGTTTTTTCATTTTCCTTTTTTCCTATTA
. : . : . : . : . : . :
rJMSF031O11+ TGAGTTTGATGAAAATGAAGATTGTATGAATTCATGGTTTACTTTCATGTTCGTTGAGTT
rJMSF019G12+ TGAGTTTGATGAAAATGAAGATTGTATGAATTCATGGTTTACTTTCATGTTCGTTGAGTT
rJMFF012F07+ TGAGTTTGATGAAAATGAAGATTGTATGAATTCATGGTTTACTTTCATGTTCGTTGAGTT
____________________________________________________________
consensus TGAGTTTGATGAAAATGAAGATTGTATGAATTCATGGTTTACTTTCATGTTCGTTGAGTT
. : . : . : . : . : . :
rJMSF031O11+ CACTTTGGAAACTGAATATGTGTATGACTT
rJMSF019G12+ CAC-TTGGAAACTGAATATGTGTATGACTT
rJMFF012F07+ CACTTTGGAAACTGAATATGTGTATGACTTTAATTTGCTTGGTAATATATATATTATAAA
____________________________________________________________
consensus CACTTTGGAAACTGAATATGTGTATGACTTTAATTTGCTTGGTAATATATATATTATAAA