Contig 001067:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006E14Sequence471002487 (19)sp|Q42961.1|PGKH_TOBAC2e-17RecName: Full=Phosphoglycerate kinase, chloroplastic; Flags: Precursor [Nicotia707001067 (21)ref|XP_008456300.1|3e-98PREDICTED: phosphoglycerate kinase, chloroplastic [Cucumis melo]
JMFF012D07Sequence513002487 (19)sp|Q42961.1|PGKH_TOBAC5e-59RecName: Full=Phosphoglycerate kinase, chloroplastic; Flags: Precursor [Nicotia741001067 (21)ref|XP_008456300.1|2e-73PREDICTED: phosphoglycerate kinase, chloroplastic [Cucumis melo]
JMFF028J08Sequence565002487 (19)sp|Q42961.1|PGKH_TOBAC1e-77RecName: Full=Phosphoglycerate kinase, chloroplastic; Flags: Precursor [Nicotia679001067 (21)ref|XP_008456300.1|2e-94PREDICTED: phosphoglycerate kinase, chloroplastic [Cucumis melo]
JMFF049P04Sequence615002487 (19)sp|Q42961.1|PGKH_TOBAC8e-40RecName: Full=Phosphoglycerate kinase, chloroplastic; Flags: Precursor [Nicotia616001067 (21)gb|AFK48886.1|1e-69unknown [Lotus japonicus]
JMFN012A01Sequence582001067 (21)ref|XP_008456300.1|3e-94PREDICTED: phosphoglycerate kinase, chloroplastic [Cucumis melo]
JMFN029O09Sequence605001067 (21)ref|XP_008456300.1|2e-111PREDICTED: phosphoglycerate kinase, chloroplastic [Cucumis melo]
JMFN031F05Sequence454001067 (21)gb|AFK48886.1|9e-34unknown [Lotus japonicus]
JMSF001B18Sequence212002487 (19)747001067 (21)ref|XP_008456300.1|7e-114PREDICTED: phosphoglycerate kinase, chloroplastic [Cucumis melo]
JMSF002L05Sequence412002487 (19)sp|Q42961.1|PGKH_TOBAC4e-37RecName: Full=Phosphoglycerate kinase, chloroplastic; Flags: Precursor [Nicotia734001067 (21)ref|XP_008456300.1|6e-104PREDICTED: phosphoglycerate kinase, chloroplastic [Cucumis melo]
JMSF008F06Sequence436002487 (19)sp|Q42961.1|PGKH_TOBAC1e-41RecName: Full=Phosphoglycerate kinase, chloroplastic; Flags: Precursor [Nicotia765001067 (21)ref|XP_008456300.1|6e-104PREDICTED: phosphoglycerate kinase, chloroplastic [Cucumis melo]
JMSF009K24Sequence317002487 (19)sp|Q42961.1|PGKH_TOBAC2e-17RecName: Full=Phosphoglycerate kinase, chloroplastic; Flags: Precursor [Nicotia731001067 (21)ref|XP_008456300.1|2e-121PREDICTED: phosphoglycerate kinase, chloroplastic [Cucumis melo]
JMSF009N03Sequence315002487 (19)sp|Q42961.1|PGKH_TOBAC8e-19RecName: Full=Phosphoglycerate kinase, chloroplastic; Flags: Precursor [Nicotia716001067 (21)ref|XP_008456300.1|4e-101PREDICTED: phosphoglycerate kinase, chloroplastic [Cucumis melo]
JMSF023M20Sequence674002487 (19)ref|XP_009763674.1|1e-103PREDICTED: phosphoglycerate kinase, chloroplastic [Nicotiana sylvestris]714001067 (21)ref|XP_008456300.1|4e-101PREDICTED: phosphoglycerate kinase, chloroplastic [Cucumis melo]
JMSF027H03Sequence659002487 (19)ref|XP_009763674.1|1e-95PREDICTED: phosphoglycerate kinase, chloroplastic [Nicotiana sylvestris]713001067 (21)ref|XP_008456300.1|5e-114PREDICTED: phosphoglycerate kinase, chloroplastic [Cucumis melo]
JMSF029C14Sequence601002487 (19)ref|XP_009763674.1|8e-85PREDICTED: phosphoglycerate kinase, chloroplastic [Nicotiana sylvestris]720001067 (21)ref|XP_008456300.1|1e-97PREDICTED: phosphoglycerate kinase, chloroplastic [Cucumis melo]
JMSF033N21Sequence600002487 (19)ref|XP_009763674.1|6e-87PREDICTED: phosphoglycerate kinase, chloroplastic [Nicotiana sylvestris]645001067 (21)ref|XP_008456300.1|1e-81PREDICTED: phosphoglycerate kinase, chloroplastic [Cucumis melo]
JMSF034O24Sequence601002487 (19)ref|XP_009763674.1|5e-86PREDICTED: phosphoglycerate kinase, chloroplastic [Nicotiana sylvestris]656001067 (21)ref|XP_008456300.1|1e-81PREDICTED: phosphoglycerate kinase, chloroplastic [Cucumis melo]
JMSF035H01Sequence654002487 (19)ref|XP_009763674.1|4e-98PREDICTED: phosphoglycerate kinase, chloroplastic [Nicotiana sylvestris]645001067 (21)ref|XP_008456300.1|2e-114PREDICTED: phosphoglycerate kinase, chloroplastic [Cucumis melo]
JMSF043C13Sequence771002487 (19)ref|XP_009763674.1|3e-129PREDICTED: phosphoglycerate kinase, chloroplastic [Nicotiana sylvestris]795001067 (21)ref|XP_008456300.1|1e-113PREDICTED: phosphoglycerate kinase, chloroplastic [Cucumis melo]
JMSF049D21Sequence600002487 (19)ref|XP_009763674.1|7e-87PREDICTED: phosphoglycerate kinase, chloroplastic [Nicotiana sylvestris]694001067 (21)ref|XP_008456300.1|8e-98PREDICTED: phosphoglycerate kinase, chloroplastic [Cucumis melo]
JMSF051O21Sequence679002487 (19)sp|Q42961.1|PGKH_TOBAC2e-51RecName: Full=Phosphoglycerate kinase, chloroplastic; Flags: Precursor [Nicotia731001067 (21)ref|XP_008456300.1|2e-107PREDICTED: phosphoglycerate kinase, chloroplastic [Cucumis melo]

Alignment

This contig is upended


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rJMSF009K24+                                                             GAGTGANTG
                      ____________________________________________________________
consensus                                                                GAGTGANTG
 
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JMFN029O09-                                                        GATCTTCACGTTCTA
rJMSF009K24+          AGTCCCTTTGGAGAAATGTGATATCTTGCTTCTGGGAGGAGGTATGATCTTCACGTTCTA
rJMSF051O21+                                                                    TA
rJMSF001B18+                                            GGAGGAGGTATGATCTTCACGTTCTA
rJMSF002L05+                                                                    TA
rJMSF027H03+                                           GGGAGGAGGTATGATCTTCACGTTCTA
rJMSF035H01+                                           GGGAGGAGGTATGATCTTCACGTTCTA
rJMSF043C13+                                           GGGAGGAGGTATGATCTTCACGTTCTA
                      ____________________________________________________________
consensus             AGTCCCTTTGGAGAAATGTGATATCTTGCTTCTGGGAGGAGGTATGATCTTCACGTTCTA
 
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JMFN029O09-           CAAGGCTCAAGGTCTTTCAGTGGGATCATCTCTTGTGGAAGAAGACAAACTAGGTCTTGC
JMFN012A01-                                                             TAGGTCTTGC
rJMSF009K24+          CAAGGCTCAAGGTCTTTCAGTGGGATCATCTCTTGTGGAAGAAGACAAACTAGGTCTTGC
rJMSF051O21+          CAAGGCTCAAGGTCTTTCAGTGGGATCATCTCTTGTGGAAGAAGACAAACTAGGTCTTGC
rJMSF001B18+          CAAGGCTCAAGGTCTTTCAGTGGGATCATCTCTTGTGGAAGAAGACAAACTAGGTCTTGC
rJMSF002L05+          CAAGGCTCAAGGTCNTTCAGTGGGATCATCTCTTGTGGAAGAAGACAAACTAGGTCTTGC
rJMSF027H03+          CAAGGCTCAAGGTCTTTCAGTGGGATCATCTCTTGTGGAAGAAGACAAACTAGGTCTTGC
rJMSF035H01+          CAAGGCTCAAGGTCTTTCAGTGGGATCATCTCTTGTGGAAGAAGACAAACTAGGTCTTGC
rJMSF043C13+          CAAGGCTCAAGGTCTTTCAGTGGGATCATCTCTTGTGGAAGAAGACAAACTAGGTCTTGC
rJMSF049D21+                                              GGAAGAAGACAAACTAGGTCTTGC
rJMFF028J08+                                                                TCTTGC
rJMSF029C14+                                              GGAAGAAGACAAACTAGGTCTTGC
rJMSF023M20+                                GGATCATCTCTTGTGGAAGAAGACAAACTAGGTCTTGC
rJMSF009N03+                               GGGATCATCTCTTGTGGAAGAAGACAAACTAGGTCTTGC
rJMFF006E14+                                            GTGGAAGAAGACAAACTAGGTCTTGC
rJMSF008F06+              GCTCNAGGTCTTTCAGTGGGATCATCTCTTGTGGAAGAAGACAAACTAGGTCTTGC
rJMFF012D07+                                             TGGAAGAAGACAAACTAGGTCTTGC
                      ____________________________________________________________
consensus             CAAGGCTCAAGGTCTTTCAGTGGGATCATCTCTTGTGGAAGAAGACAAACTAGGTCTTGC
 
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JMFN029O09-           TACATCACTCCTTGAGAAGGCTAAAGCCAAGGGTGTCAGTCTATTGTTACCTACAGATGT
JMFN012A01-           TACATCACTCCTTGAGAAGGCTAAAGCCAAGGGTGTCAGTCTATTGTTACCTACAGATGT
rJMSF009K24+          TACATCACTCCTTGAGAAGGCTAAAGCCAAGGGTGTCAGTCTATTGTTACCTACAGATGT
rJMSF051O21+          TACATCACTCCTTGAGAAGGCTAAAGCCAAGGGTGTCAGTCTATTGTTACCTACAGATGT
rJMSF001B18+          TACATCACTCCTTGAGAAGGCTAAAGCCAAGGGTGTCAGTCTATTGTTACCTACAGATGT
rJMSF002L05+          TACATCACTCCTTGAGAAGGCTAAAGCCAAGGGTGTCAGTCTATTGTTACCTACAGATGT
rJMSF027H03+          TACATCACTCCTTGAGAAGGCTAAAGCCAAGGGTGTCAGTCTATTGTTACCTACAGATGT
rJMSF035H01+          TACATCACTCCTTGAGAAGGCTAAAGCCAAGGGTGTCAGTCTATTGTTACCTACAGATGT
rJMSF043C13+          TACATCACTCCTTGAGAAGGCTAAAGCCAAGGGTGTCAGTCTATTGTTACCTACAGATGT
rJMSF049D21+          TACATCACTCCTTGAGAAGGCTAAAGCCAAGGGTGTCAGTCTATTGTTACCTACAGATGT
rJMFF028J08+          TACATCACTCCTTGAGAAGGCTAAAGCCAAGGGTGTCAGTCTATTGTTACCTACAGATGT
rJMSF033N21+                                                             TACAGATGT
rJMSF029C14+          TACATCACTCCTTGAGAAGGCTAAAGCCAAGGGTGTCAGTCTATTGTTACCTACAGATGT
rJMSF023M20+          TACATCACTCCTTGAGAAGGCTAAAGCCAAGGGTGTCAGTCTATTGTTACCTACAGATGT
rJMSF009N03+          TACATCACTCCTTGAGAAGGCTAAAGCCAAGGGTGTCAGTCTATTGTTACCTACAGATGT
rJMFF006E14+          TACATCACTCCTTGAGAAGGCTAAAGCCAAGGGTGTCAGTCTATTGTTACCTACAGATGT
rJMSF008F06+          TACATCACTCCTTGAGAAGGCTAAAGCCAAGGGTGTCAGTCTATTGTTACCTACAGATGT
rJMSF034O24+                                                              ACAGATGT
rJMFF012D07+          TACATCACTCCTTGAGAAGGCTAAAGCCAAGGGTGTCAGTCTATTGTTACCTACAGATGT
                      ____________________________________________________________
consensus             TACATCACTCCTTGAGAAGGCTAAAGCCAAGGGTGTCAGTCTATTGTTACCTACAGATGT
 
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JMFN029O09-           GGTTATCGCAGATAAATTTGCTCCTGATGCAAACAGTAAGGTTGTTCCGGCATCTGCTAT
JMFN012A01-           GGTTATCGCAGATAAATTTGCTCCTGATGCAAACAGTAAGGTTGTTCCGGCATCTGCTAT
rJMSF009K24+          GGTTATCGCAGATAAATTTGCTCCTGATGCAAACAGTAAGGTTGTTCCGGCATCTGCTAT
rJMSF051O21+          GGTTATCGCAGATAAATTTGCTCCTGATGCAAACAGTAAGGTTGTTCCGGCATCTGCTAT
rJMSF001B18+          GGTTATCGCAGATAAATTTGCTCCTGATGCAAACAGTAAGGTTGTTCCGGCATCTGCTAT
rJMSF002L05+          GGTTATCGCAGATAAATTTGCTCCTGATGCAAACAGTAAGGTTGTTCCGGCATCTGCTAT
rJMSF027H03+          GGTTATCGCAGATAAATTTGCTCCTGATGCAAACAGTAAGGTTGTTCCGGCATCTGCTAT
rJMSF035H01+          GGTTATCGCAGATAAATTTGCTCCTGATGCAAACAGTAAGGTTGTTCCGGCATCTGCTAT
rJMSF043C13+          GGTTATCGCAGATAAATTTGCTCCTGATGCAAACAGTAAGGTTGTTCCGGCATCTGCTAT
rJMSF049D21+          GGTTATCGCAGATAAATTTGCTCCTGATGCAAACAGTAAGGTTGTTCCGGCATCTGCTAT
rJMFF028J08+          GGTTATCGCAGATAAATTTGCTCCTGATGCAAACAGTAAGGTTGTTCCGGCATCTGCTAT
rJMSF033N21+          GGTTATCGCAGATAAATTTGCTCCTGATGCAAACAGTAAGGTTGTTCCGGCATCTGCTAT
rJMSF029C14+          GGTTATCGCAGATAAATTTGCTCCTGATGCAAACAGTAAGGTTGTTCCGGCATCTGCTAT
rJMSF023M20+          GGTTATCGCAGATAAATTTGCTCCTGATGCAAACAGTAAGGTTGTTCCGGCATCTGCTAT
rJMSF009N03+          GGTTATCGCAGATAAATTTGCTCCTGATGCAAACAGTAAGGTTGTTCCGGCATCTGCTAT
rJMFF006E14+          GGTTATCGCAGATAAATTTGCTCCTGATGCAAACAGTAAGGTTGTTCCGGCATCTGCTAT
rJMSF008F06+          GGTTATCGCAGATAAATTTGCTCCTGATGCAAACAGTAAGGTTGTTCCGGCATCTGCTAT
rJMSF034O24+          GGTTATCGCAGATAAATTTGCTCCTGATGCAAACAGTAAGGTTGTTCCGGCATCTGCTAT
rJMFF049P04+                                                   TTGTTCCGGCATCTGCTAT
rJMFF012D07+          GGTTATCGCAGATAAATTTGCTCCTGATGCAAACAGTAAGGTTGTTCCGGCATCTGCTAT
                      ____________________________________________________________
consensus             GGTTATCGCAGATAAATTTGCTCCTGATGCAAACAGTAAGGTTGTTCCGGCATCTGCTAT
 
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JMFN029O09-           CCCAGATGGTTGGATGGGATTGGACATTGGACCGGACTCTGTCAAGACTTTCAATGATGC
JMFN012A01-           CCCAGATGGTTGGATGGGATTGGACATTGGACCGGACTCTGTCAAGACTTTCAATGATGC
rJMSF009K24+          CCCAGATGGTTGGATGGGATTGGACATTGGACCGGACTCTGTCAAGACTTTCAATGATGC
rJMSF051O21+          CCCAGATGGTTGGATGGGATTGGACATTGGACCGGACTCTGTCAAGACTTTCAATGATGC
rJMSF001B18+          CCCAGATGGTTGGATGGGATTGGACATTGGACCGGACTCTGTCAAGACTTTCAATGATGC
rJMSF002L05+          CCCAGATGGTTGGATGGGATTGGACATTGGACCGGACTCTGTCAAGACTTTCAATGATGC
rJMSF027H03+          CCCAGATGGTTGGATGGGATTGGACATTGGACCGGACTCTGTCAAGACTTTCAATGATGC
rJMSF035H01+          CCCAGATGGTTGGATGGGATTGGACATTGGACCGGACTCTGTCAAGACTTTCAATGATGC
rJMSF043C13+          CCCAGATGGTTGGATGGGATTGGACATTGGACCGGACTCTGTCAAGACTTTCAATGATGC
rJMSF049D21+          CCCAGATGGTTGGATGGGATTGGACATTGGACCGGACTCTGTCAAGACTTTCAATGATGC
rJMFF028J08+          CCCAGATGGTTGGATGGGATTGGACATTGGACCGGACTCTGTCAAGACTTTCAATGATGC
rJMSF033N21+          CCCAGATGGTTGGATGGGATTGGACATTGGACCGGACTCTGTCAAGACTTTCAATGATGC
rJMSF029C14+          CCCAGATGGTTGGATGGGATTGGACATTGGACCGGACTCTGTCAAGACTTTCAATGATGC
rJMSF023M20+          CCCAGATGGTTGGATGGGATTGGACATTGGACCGGACTCTGTCAAGACTTTCAATGATGC
rJMSF009N03+          CCCAGATGGTTGGATGGGATTGGACATTGGACCGGACTCTGTCAAGACTTTCAATGATGC
rJMFF006E14+          CCCAGATGGTTGGATGGGATTGGACATTGGACCGGACTCTGTCAAGACTTTCAATGATGC
rJMSF008F06+          CCCAGATGGTTGGATGGGATTGGACATTGGACCGGACTCTGTCAAGACTTTCAATGATGC
rJMSF034O24+          CCCAGATGGTTGGATGGGATTGGACATTGGACCGGACTCTGTCAAGACTTTCAATGATGC
rJMFF049P04+          CCCAGATGGTTGGATGGGATTGGACATTGGACCGGACTCTGTCAAGACTTTCAATGATGC
rJMFF012D07+          CCCAGATGGTTGGATGGGATTGGACATTGGACCGGACTCTGTCAAGACTTGCAATGATGC
                      ____________________________________________________________
consensus             CCCAGATGGTTGGATGGGATTGGACATTGGACCGGACTCTGTCAAGACTTTCAATGATGC
 
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JMFN029O09-           GTTGGAGACAACAAAAACTGTGATTTGGAATGGACCAATGGGAGTGTTTGAATTTGACAA
JMFN012A01-           GTTGGAGACAACAAAAACTGTGATTTGGAATGGACCAATGGGAGTGTTTGAATTTGACAA
rJMSF009K24+          GTTGGAGACAACAAAAACTGTGATTTGGAATGGACCAATGGGAGTGTTTGAATTTGACAA
rJMSF051O21+          GTTGGAGACAACAAAAACTGTGATTTGGAATGGACCAATGGGAGTGTTTGAATTTGACAA
rJMSF001B18+          GTTGGAGACAACAAAAACTGTGATTTGGAATGGACCAATGGGAGTGTTTGAATTTGACAA
rJMSF002L05+          GTTGGAG---ACAAAAACTGTGATTTGGAATGGACCAATGGGAGTGTTTGAATTTGACAA
rJMSF027H03+          GTTGGAGACAACAAAAACTGTGATTTGGAATGGACCAATGGGAGTGTTTGAATTTGACAA
rJMSF035H01+          GTTGGAGACAACAAAAACTGTGATTTGGAATGGACCAATGGGAGTGTTTGAATTTGACAA
rJMSF043C13+          GTTGGAGACAACAAAAACTGTGATTTGGAATGGACCAATGGGAGTGTTTGAATTTGACAA
rJMSF049D21+          GTTGGAGACAACAAAAACTGTGATTTGGAATGGACCAATGGGAGTGTTTGAATTTGACAA
rJMFF028J08+          GTTGGAGACAACAAAAACTGTGATTTGGAATGGACCAATGGGAGTGTTTGAATTTGACAA
rJMSF033N21+          GTTGGAGACAACAAAAACTGTGATTTGGAATGGACCAATGGGAGTGTTTGAATTTGACAA
rJMSF029C14+          GTTGGAGACAACAAAAACTGTGATTTGGAATGGACCAATGGGAGTGTTTGAATTTGACAA
rJMSF023M20+          GTTGGAGACAACAAAAACTGTGATTTGGAATGGACCAATGGGAGTGTTTGAATTTGACAA
rJMSF009N03+          GTTGGAGACAACAAAAACTGTGATTTGGAATGGACCAATGGGAGTGTTTGAATTTGACAA
rJMFF006E14+          GTTGGAGACAACAAAAACTGTGATTTGGAATGGACCAATGGGAGTGTTTGAATTTGACAA
rJMSF008F06+          GTTGGAGACAACAAAAACTGTGATTTGGAATGGACCAATGGGAGTGTTTGAATTTGACAA
rJMSF034O24+          GTTGGAGACAACAAAAACTGTGATTTGGAATGGACCAATGGGAGTGTTTGAATTTGACAA
rJMFF049P04+          GTTGGAGACAACAAAAACTGTGATTTGGAATGGACCAATGGGAGTGTTTGAATTTGACAA
rJMFF012D07+          GTTGGAGACAACAAAAACTGTGATTTGGAATGGACCAATGGGAGTGTTTGAATTTGACAA
                      ____________________________________________________________
consensus             GTTGGAGACAACAAAAACTGTGATTTGGAATGGACCAATGGGAGTGTTTGAATTTGACAA
 
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JMFN029O09-           ATTTGCAGTAGGCACAGAGTCAGTAGCAAAGAAGCTTGCTGAACTGAGTGGGAAAGGAGT
JMFN012A01-           ATTTGCAGTAGGCACAGAGTCAGTAGCAAAGAAGCTTGCTGAACTGAGTGGGAAAGGAGT
rJMSF009K24+          ATTTGCAGTAGGCACAGAGTCAGTAGCAAAGAAGCTTGCTGAACTGAGTGGGAAAGGAGT
rJMSF051O21+          ATTTGCAGTAGGCACAGAGTCAGTAGCAAAGAAGCTTGCTGAACTGAGTGGGAAAGGAGT
rJMSF001B18+          ATTTGCAGTAGGCACAGAGTCAGTAGCAAAGAAGCTTGCTGAACTGAGTGGGAAAGGAGT
rJMSF002L05+          ATTTGCAGTAGGCACAGAGTCAGTAGCAAAGAAGCTTGCTGAACTGAGTGGGAAAGGAGT
rJMSF027H03+          ATTTGCAGTAGGCACAGAGTCAGTAGCAAAGAAGCTTGCTGAACTGAGTGGGAAAGGAGT
rJMSF035H01+          ATTTGCAGTAGGCACAGAGTCAGTAGCAAAGAAGCTTGCTGAACTGAGTGGGAAAGGAGT
rJMSF043C13+          ATTTGCAGTAGGCACAGAGTCAGTAGCAAAGAAGCTTGCTGAACTGAGTGGGAAAGGAGT
rJMSF049D21+          ATTTGCAGTAGGCACAGAGTCAGTAGCAAAGAAGCTTGCTGAACTGAGTGGGAAAGGAGT
rJMFF028J08+          ATTTGCAGTAGGCACAGAGTCAGTAGCAAAGAAGCTTGCTGAACTGAGTGGGAAAGGAGT
rJMSF033N21+          ATTTGCAGTAGGCACAGAGTCAGTAGCAAAGAAGCTTGCTGAACTGAGTGGGAAAGGAGT
rJMSF029C14+          ATTTGCAGTAGGCACAGAGTCAGTAGCAAAGAAGCTTGCTGAACTGAGTGGGAAAGGAGT
rJMSF023M20+          ATTTGCAGTAGGCACAGAGTCAGTAGCAAAGAAGCTTGCTGAACTGAGTGGGAAAGGAGT
rJMSF009N03+          ATTTGCAGTAGGCACAGAGTCAGTAGCAAAGAAGCTTGCTGAACTGAGTGGGAAAGGAGT
rJMFF006E14+          ATTTGCAGTAGGCACAGAGTCAGTAGCAAAGAAGCTTGCTGAACTGAGTGGGAAAGGAGT
rJMSF008F06+          ATTTGCAGTAGGCACAGAGTCAGTAGCAAAGAAGCTTGCTGAACTGAGTGGGAAAGGAGT
rJMSF034O24+          ATTTGCAGTAGGCACAGAGTCAGTAGCAAAGAAGCTTGCTGAACTGAGTGGGAAAGGAGT
JMFN031F05-                     GGCACAGAGTCAGTAGCAAAGAAGCTTGCTGAACTGAGTGGGAAAGGAGT
rJMFF049P04+          ATTTGCAGTAGGCACAGAGTCAGTAGCAAAGAAGCTTGCTGAACTGAGTGGGAAAGGAGT
rJMFF012D07+          ATTTGCAGTAGGCACAGAGTCAGT--CAAAGAAGCTTGCTGAACTGAGTGGGAAAGGAGT
                      ____________________________________________________________
consensus             ATTTGCAGTAGGCACAGAGTCAGTAGCAAAGAAGCTTGCTGAACTGAGTGGGAAAGGAGT
 
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JMFN029O09-           GACGACCATTATCGGAGGTGGAGACTCAGTTGCAGCAGTAGAGAAAGTTGGAGTTGCTAG
JMFN012A01-           GACCACCATTATCGGAGGTGGAGACTCACTTGCAGCAGTACAGAAAGTTGGAGTTGCTAG
rJMSF009K24+          GACGACCATTATCGGAGGTGGAGACTCAGTTGCAGCAGTAGAGAAAGTTGGAGTTGCTAG
rJMSF051O21+          GACGACCATTATCGGAGGTGGAGACTCAGTTGCAGCAGTAGAGAAAGTTGGAGTTGCTAG
rJMSF001B18+          GACGACCATTATCGGAGGTGGAGACTCAGTTGCAGCAGTAGAGAAAGTTGGAGTTGCTAG
rJMSF002L05+          GACGACCATTATCGGAGGTGGAGACTCAGTTGCAGCAGTAGAGAAAGTTGGAGTTGCTAG
rJMSF027H03+          GACGACCATTATCGGAGGTGGAGACTCAGTTGCAGCAGTAGAGAAAGTTGGAGTTGCTAG
rJMSF035H01+          GACGACCATTATCGGAGGTGGAGACTCAGTTGCAGCAGTAGAGAAAGTTGGAGTTGCTAG
rJMSF043C13+          GACGACCATTATCGGAGGTGGAGACTCAGTTGCAGCAGTAGAGAAAGTTGGAGTTGCTAG
rJMSF049D21+          GACGACCATTATCGGAGGTGGAGACTCAGTTGCAGCAGTAGAGAAAGTTGGAGTTGCTAG
rJMFF028J08+          GACGACCATTATCGGAGGTGGAGACTCAGTTGCAGCAGTAGAGAAAGTTGGAGTTGCTAG
rJMSF033N21+          GACGACCATTATCGGAGGTGGAGACTCAGTTGCAGCAGTAGAGAAAGTTGGAGTTGCTAG
rJMSF029C14+          GACGACCATTATCGGAGGTGGAGACTCAGTTGCAGCAGTAGAGAAAGTTGGAGTTGCTAG
rJMSF023M20+          GACGACCATTATCGGAGGTGGAGACTCAGTTGCAGCAGTAGAGAAAGTTGGAGTTGCTAG
rJMSF009N03+          GACGACCATTATCGGAGGTGGAGACTCAGTTGCAGCAGTAGAGAAAGTTGGAGTTGCTAG
rJMFF006E14+          GACGACCATTATCGGAGGTGGAGACTCAGTTGCAGCAGTAGAGAAAGTTGGAGTTGCTAG
rJMSF008F06+          GACGACCATTATCGGAGGTGGAGACTCAGTTGCAGCAGTAGAGAAAGTTGGAGTTGCTAG
rJMSF034O24+          GACGACCATTATCGGAGGTGGAGACTCAGTTGCAGCAGTAGAGAAAGTTGGAGTTGCTAG
JMFN031F05-           GACGACCATTATCGGAGGTGGAGACTCAGTTGCAGCAGTAGAGAAAGTTGGAGTTGCTAG
rJMFF049P04+          GACGACCATTATCGGAGGTGGAGACTCAGTTGCAGCAGTAGAGAAAGTTGGAGTTGCTAG
rJMFF012D07+          GACGACCATTATCGGAGGTGGAGACTCAGTTGCAGCAGTAGAGAAAGTTGGAGTTGCTAG
                      ____________________________________________________________
consensus             GACGACCATTATCGGAGGTGGAGACTCAGTTGCAGCAGTAGAGAAAGTTGGAGTTGCTAG
 
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JMFN029O09-           CGTGATGAGCCACATTTCAACCGGAGGTGGTGCTAGTTTGGAGCTGTTGGAAGGAAAAGA
JMFN012A01-           CGTGATGAGCCACATTTCAACCGGAGGTGGTGCTAGTTTGGAGCTGTTGGAAGGAAAAGA
rJMSF009K24+          CGTGATGAGCCACATTTCAACCGGAGGTGGTGCTAGTTTGGAGCTGTTGGAAGGAAAAGA
rJMSF051O21+          CGTGATGAGCCACATTTCAACCGGAGGTGGTGCTAGTTTGGAGCTGTTGGAAGGAAAAGA
rJMSF001B18+          CGTGATGAGCCACATTTCAACCGGAGGTGGTGCTAGTTTGGAGCTGTTGGAAGGAAAAGA
rJMSF002L05+          CGTGATGAGCCACATTTCAACCGGAGGTGGTGCTAGTTTGGAGCTGTTGGAAGGAAAAGA
rJMSF027H03+          CGTGATGAGCCACATTTCAACCGGAGGTGGTGCTAGTTTGGAGCTGTTGGAAGGAAAAGA
rJMSF035H01+          CGTGATGAGCCACATTTCAACCGGAGGTGGTGCTAGTTTGGAGCTGTTGGAAGGAAAAGA
rJMSF043C13+          CGTGATGAGCCACATTTCAACCGGAGGTGGTGCTAGTTTGGAGCTGTTGGAAGGAAAAGA
rJMSF049D21+          CGTGATGAGCCACATTTCAACCGGAGGTGGTGCTAGTTTGGAGCTGTTGGAAGGAAAAGA
rJMFF028J08+          CGTGATGAGCCACATTTCAACCGGAGGTGGTGCTAGTTTGGAGCTGTTGGAAGGAAAAGA
rJMSF033N21+          CGTGATGAGCCACATTTCAACCGGAGGTGGTGCTAGTTTGGAGCTGTTGGAAGGAAAAGA
rJMSF029C14+          CGTGATGAGCCACATTTCAACCGGAGGTGGTGCTAGTTTGGAGCTGTTGGAAGGAAAAGA
rJMSF023M20+          CGTGATGAGCCACATTTCAACCGGAGGTGGTGCTAGTTTGGAGCTGTTGGAAGGAAAAGA
rJMSF009N03+          CGTGATGAGCCACATTTCAACCGGAGGTGGTGCTAGTTTGGAGCTGTTGGAAGGAAAAGA
rJMFF006E14+          CGTGATGAGCCACATTTCAACCGGAGGTGGTGCTAGTTTGGAGCTGTTGGAAGGAAAAGA
rJMSF008F06+          CGTGATGAGCCACATTTCAACCGGAGGTGGTGCTAGTTTGGAGCTGTTGGAAGGAAAAGA
rJMSF034O24+          CGTGATGAGCCACATTTCAACCGGAGGTGGTGCTAGTTTGGAGCTGTTGGAAGGAAAAGA
JMFN031F05-           CGTGATGAGCCACATTTCAACCGGAGGTGGTGCTAGTTTGGAGCTGTTGGAAGGAAAAGA
rJMFF049P04+          CGTGATGAGCCACATTTCAACCGGAGGTGGTGCTAGTTTGGAGCTGTTGGAAGGAAAAGA
rJMFF012D07+          CGTGATGAGCCACATTTCAACCGGAGGTGGTGCTAGTTTGGAGCTGTTGGAAGGAAAAGA
                      ____________________________________________________________
consensus             CGTGATGAGCCACATTTCAACCGGAGGTGGTGCTAGTTTGGAGCTGTTGGAAGGAAAAGA
 
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JMFN029O09-           GCTCCCCGGCGTTATTGCTCTTGACGAGGCTGTCCCTGTTGCTGCATGAGATCGATCAGA
JMFN012A01-           GCTCCCCGGCGTTATTGCTCTTGACGAGGCTGTCCCTGTTGCTGCATGAGATCGATCAGA
rJMSF009K24+          GCTCCCCGGCGTTATTGCTCTTGACGAGGCTGTCCCTGTTGCTGCATGAGATCGATCAGA
rJMSF051O21+          GCTCCCCGGCGTTATTGCTCTTGACGAGGCTGTCCCTGTTGCTGCATGAGATCGATCAGA
rJMSF001B18+          GCTCCCCGGCGTTATTGCTCTTGACGAGGCTGTCCCTGTTGCTGCATGAGATCGATCAGA
rJMSF002L05+          GCTCCCCGGCGTTATTGCTCTTGACGAGGCTGTCCCTGTTGCTGCATGAGATCGATCAGA
rJMSF027H03+          GCTCCCCGGCGTTATTGCTCTTGACGAGGCTGTCCCTGTTGCTGCATGAGATCGATCAGA
rJMSF035H01+          GCTCCCCGGCGTTATTGCTCTTGACGAGGCTGTCCCTGTTGCTGCATGAGATCGATCAGA
rJMSF043C13+          GCTCCCCGGCGTTATTGCTCTTGACGAGGCTGTCCCTGTTGCTGCATGAGATCGATCAGA
rJMSF049D21+          GCTCCCCGGCGTTATTGCTCTTGACGAGGCTGTCCCTGTTGCTGCATGAGATCGATCAGA
rJMFF028J08+          GCTCCCCGGCGTTATTGCTCTTGACGAGGCTGTCCCTGTTGCTGCATGAGATCGATCAGA
rJMSF033N21+          GCTCCCCGGCGTTATTGCTCTTGACGAGGCTGTCCCTGTTGCTGCATGAGATCGATCAGA
rJMSF029C14+          GCTCCCCGGCGTTATTGCTCTTGACGAGGCTGTCCCTGTTGCTGCATGAGATCGATCAGA
rJMSF023M20+          GCTCCCCGGCGTTATTGCTCTTGACGAGGCTGTCCCTGTTGCTGCATGAGATCGATCAGA
rJMSF009N03+          GCTCCCCGGCGTTATTGCTCTTGACGAGGCTGTCCCTGTTGCTGCATGAGATCGATCAGA
rJMFF006E14+          GCTCCCCGGCGTTATTGCTCTTGACGAGGCTGTCCCTGTTGCTGCATGAGATCGATCAGA
rJMSF008F06+          GCTCCCCGGCGTTATTGCTCTTGACGAGGCTGTCCCTGTTGCTGCATGAGATCGATCAGA
rJMSF034O24+          GCTCCCCGGCGTTATTGCTCTTGACGAGGCTGTCCCTGTTGCTGCATGAGATCGATCAGA
JMFN031F05-           GCTCCCCGGCGTTATTGCTCTTGACGAGGCTGTCCCTGTTGCTGCATGAGATCGATCAGA
rJMFF049P04+          GCTCCCCGGCGTTATTGCTCTTGACGAGGCTGTCCCTGTTGCTGCATGAGATCGATCAGA
rJMFF012D07+          GCTCCCCGGCGTTATTGCTCTTGACGAGGCTGTCCCTGTTGCTGCATGAGATCGATCAGA
                      ____________________________________________________________
consensus             GCTCCCCGGCGTTATTGCTCTTGACGAGGCTGTCCCTGTTGCTGCATGAGATCGATCAGA
 
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JMFN029O09-           TCACAATCCGAGAAAGATAAGATTGGGAGAAGAGAGATTTCTTCTTTTGT          
JMFN012A01-           TCACAATCCGAGAAAGATAAGATTGGGAGAGAAGAGATTTCTTCTTTTGTAGCTGA-CTG
rJMSF009K24+          TCACAATCCGAGAAAGATAAGATTGGGAGAGAAGAGATTTCTTCTTTTGTAGCTGA-CTG
rJMSF051O21+          TCACAATCCGAGAAAGATAAGATTGGGAGAGAAGAGATTTCTTCTTTTGTAGCTGA-CTG
rJMSF001B18+          TCACAATCCGAGAAAGATAAGATTGGGAGAGAAGAGATTTCTTCTTTTGTAGCTGA-CTG
rJMSF002L05+          TCACAATCCGAGAAAGATAAGATTGGGAGAGAAGAGATTTCTTCTTTTGTAGCTGA-CTG
rJMSF027H03+          TCACAATCCGAGAAAGATAAGATTGGGAGAGAAGAGATTTCTTCTTTTGTAGCTGA-CTG
rJMSF035H01+          TCACAATCCGAGAAAGATAAGATTGGGAGAGAAGAGATTTCTTCTTTTGTAGCTGACCTG
rJMSF043C13+          TCACAATCCGAGAAAGATAAGATTGGGAGAGAAGAGATTTCTTCTTTTGTAGCTGA-CTG
rJMSF049D21+          TCACAATCCGAGAAAGATAAGATTGGGAGAGAAGAGATTTCTTCTTTTGTAGCTGA-CTG
rJMFF028J08+          TCACAATCCGAGAAAGATAAGATTGGGAGAGAAGAGATTTCTTCTTTTGTAGCTGA-CTG
rJMSF033N21+          TCACAATCCGAGAAAGATAAGATTGGGAGAGAAGAGATTTCTTCTTTTGTAGCTGA-CTG
rJMSF029C14+          TCACAATCCGAGAAAGATAAGATTGGGAGAGAAGAGATTTCTTCTTTTGTAGCTGA-CTG
rJMSF023M20+          TCACAATCCGAGAAAGATAAGATTGGGAGAGAAGAGATTTCTTCTTTTGTAGCTGA-CTG
rJMSF009N03+          TCACAATCCGAGAAAGATAAGATTGGGAGAGAAGAGATTTCTTCTTTTGTAGCTGA-CTG
rJMFF006E14+          TCACAATCCGAGAAAGATAAGATTGGGAGAGAAGAGATTTCTTCTTTTGTAGCTGA-CTG
rJMSF008F06+          TCACAATCCGAGAAAGATAAGATTGGGAGAGAAGAGATTTCTTCTTTTGTAGCTGA-CTG
rJMSF034O24+          TCACAATCCGAGAAAGATAAGATTGGGAGAGAAGAGATTTCTTCTTTTGTAGCTGA-CTG
JMFN031F05-           TCACAATCCGAGAAAGATAAGATTGGGAGAGAAGAGATTTCTTCTTTTGTAGCTGA-CTG
rJMFF049P04+          TCACAATCCGAGAAAGATAAGATTGGGAGAGAAGAGATTTCTTCTTTTGTAGCTGA-CTG
rJMFF012D07+          TCACAATCCGAGAAAGATAAGATTGGGAGAGAAGAGATTTCTTCTTTTGTAGCTGA-CTG
                      ____________________________________________________________
consensus             TCACAATCCGAGAAAGATAAGATTGGGAGAGAAGAGATTTCTTCTTTTGTAGCTGA-CTG
 
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JMFN012A01-           TTGTTAAATAATAAGTATTACCTTACCTTAAAA                           
rJMSF009K24+          TTGTTAAATAATAAGTATTACCTTACCTTAAAATTTAAATACACACCTCCTACCCACCCT
rJMSF051O21+          TTGTTAAATAATAAGTATTACCTTACCTTAAAATTTAAATACACACCTCCTACCCACCCT
rJMSF001B18+          TTGTTAAATAATAAGTATTACCTTACCTTAAAATTTAAATACACACCTCCTACCCACCCT
rJMSF002L05+          TTGTTAAATAATAAGTATTACCTTACCTTAAAATTTAAATACACACCTCCTACCCACCCT
rJMSF027H03+          TTGTTAAATAATAAGTATTACCTTACCTTAAAATTTAAATACACACCTCCTACCCACCCT
rJMSF035H01+          TTGTTAAATAATAAGTAT                                          
rJMSF043C13+          TTGTTAAATAATAAGTATTACCTTACCTTAAAATTTAAATACACACCTCCTACCCACCCT
rJMSF049D21+          TTGTTAAATAATAAGTATTACCTTACCTTAAAATTTAAATACACACCTCCTACCCACCCT
rJMFF028J08+          TTGTTAAATAATAAGTATTACCTTACCTTAAAATTTAAATACACACCTCCTACCCACCCT
rJMSF033N21+          TTGTTAAATAATAAGTATTACCTTACCTTAAAATTTAAATACACACCTCCTACCCACCCT
rJMSF029C14+          TTGTTAAATAATAAGTATTACCTTACCTTAAAATTTAAATACACACCTCCTACCCACCCT
rJMSF023M20+          TTGTTAAATAATAAGTATTACCTTACCTTAAAATTTAAATACGCACCTCCTACCCACCCT
rJMSF009N03+          TTGTTAAATAATAAGTATTACCTTACCTTAAAATTTAAATACACACCTCCTACCCACCCT
rJMFF006E14+          TTGTTAAATAATAAGTATTACCTTACCTTAAAATTTAAATACACACCTCCTACCCACCCT
rJMSF008F06+          TTGTTAAATAATAAGTATTACCTTACCTTAAAATTTAAATACACACCTCCTACCCACCCT
rJMSF034O24+          TTGTTAAATAATAAGTATTACCTTACCTTAAAATTTAAATACACACCTCCTACCCACCCT
JMFN031F05-           TTGTTAAATAATAAGTATTACCTTACCTTAAAATTTAAATACACACCTCCTACCCACCCT
rJMFF049P04+          TTGTTAAATAATAAGTATTACCTTACCTTAAAATTTAAATACACACCTCCTACCCACCCT
rJMFF012D07+          TTGTTAAATAATAAGTATTACCTTACCTTAAAATTTAAATACACACCTCCTACCCACCCT
                      ____________________________________________________________
consensus             TTGTTAAATAATAAGTATTACCTTACCTTAAAATTTAAATACACACCTCCTACCCACCCT
 
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rJMSF009K24+          TTT                                                         
rJMSF051O21+          TTTGTTTTTTGTCAGT-CAGTGTGTGTTCTGTTCTAAATAACAACCCCCTATCCGATCGA
rJMSF001B18+          TTTGTTTTTTGTCAGTCCAGTGTGTGTTCTGTTCTAAATAACAACCCCCTATCCGATCGA
rJMSF002L05+          TTTGTTTTTTGTCAGT-CAGTGTGTGTTCTGTTCTAAATAACAACCCCCTATCCGATCGA
rJMSF027H03+          TTTGTTTTTTGTCAGT-C                                          
rJMSF043C13+          TTTGTTTTTTGTCAGT-CAGTGTGTGTTCTGTTCTAAATAACAACCCCCTATCCGATCGA
rJMSF049D21+          TTTGTTTTTTGTCAGT-CAGTGTGTGTTCTGTTCTAAATAACAACCCCCTATCCGATCGA
rJMFF028J08+          TTTGTTTTTTGTCAGT-CAGTGTGTGTTCTGTTCTAAATAACAACCCCCTATCCGATCGA
rJMSF033N21+          TTTGTTTTTTGTCAGT-CAGTGTGTGTTCTGTTCTAAATAACAACCCCCTATCCGATCGA
rJMSF029C14+          TTTGTTTTTTGTCAGT-CAGTGTGTGTTCTGTTCTAAATAACAACCCCCTATCCGATCGA
rJMSF023M20+          TTTGTTTTTTGTCAGT-CAGTGTGTGTTCTGTTCTAAATAACAACCCCCTATCCGATCGA
rJMSF009N03+          TTTGTTTTTTGTCAGT-CAGTGTGTGTTCTGTTCTAAATAACAACCCCCTATCCGATCGA
rJMFF006E14+          TTTGTTTTTTGTCAGT-CAGTGTGTGTTCTGTTCTAAATAACAACCCCCTATCCGATCGA
rJMSF008F06+          TTTGTTTTTTGTCAGT-CAGTGTGTGTTCTGTTCTAAATAACAACCCCCTATCCGATCGA
rJMSF034O24+          TTTGTTTTTTGTCAGT-CAGTGTGTGTTCTGTTCTAAATAACAACCCCCTATCCGATCGA
JMFN031F05-           TTTGTTTTTTGTCAGT-CAGTGTGTGTTCTGTTCTAAATAACAACCCCCTATCCGATCGA
rJMFF049P04+          TTTGTTTTTTGTCAGT-CAGTGTGTGTTCTGTTCTAAATAACAACCCCCTATCCGATCGA
rJMFF012D07+          TTTGTTTTTTGTCAGT-CAGTGTGTGTTCTGTTCTAAATAACAACCCCCTATCCGATCGA
                      ____________________________________________________________
consensus             TTTGTTTTTTGTCAGT-CAGTGTGTGTTCTGTTCTAAATAACAACCCCCTATCCGATCGA
 
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rJMSF051O21+          TGAGCAAACCA                                                 
rJMSF001B18+          TG                                                          
rJMSF002L05+          TGAGCAAACCAGTC                                              
rJMSF043C13+          TGAGCAAACCAGTCAGTTTGTGTATTTATATATAATAT                      
rJMSF049D21+          TGAGCAAACCAG                                                
rJMFF028J08+          TGAGCAAACCAGTCA                                             
rJMSF033N21+          TGAGCAAACCAGTCAGTTTGTGTATTTATATATAATAT                      
rJMSF029C14+          TGAGCAAACCAGTCAGTTTGTGTATTTATATATAATAT                      
rJMSF023M20+          TGAGCAAACCAGTCAGTT                                          
rJMSF009N03+          TGAGCAAACCAGTCAGTTT                                         
rJMFF006E14+          TGAGCAAACCAGTCAGTTTG                                        
rJMSF008F06+          TGAGCAAACCAGTCAGTTTGTGTATTTATATATAATAT                      
rJMSF034O24+          TGAGCAAACCAGTCAGTTTGTGTATTTATATATAATATTGTACCTC              
JMFN031F05-           TGAGCAAACCAGTCAGTTTGTGTATTTATATATAATATTGTACCTC              
rJMFF049P04+          TGAGCAAACCAGTCAGTTTGTGTATTTATATATAATATTGTACCTCAATTTGGTAGTCT 
rJMFF012D07+          TGAGCAAACCAGTCAGTTTGTGTATTTATATATAATATTGTACCTCAATTTGGTAGTCTA
                      ____________________________________________________________
consensus             TGAGCAAACCAGTCAGTTTGTGTATTTATATATAATATTGTACCTCAATTTGGTAGTCTA