| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012C11 | Sequence | 581 | 006515 (3) | ref|XP_009599899.1| | 2e-67 | PREDICTED: strictosidine synthase 3-like [Nicotiana tomentosiformis] | 766 | 001065 (3) | ref|XP_006344500.1| | 4e-38 | PREDICTED: adipocyte plasma membrane-associated protein-like [Solanum tuberosum |
| JMFF026N15 | Sequence | 558 | 006515 (3) | ref|XP_009599899.1| | 8e-64 | PREDICTED: strictosidine synthase 3-like [Nicotiana tomentosiformis] | 741 | 001065 (3) | ref|XP_009599899.1| | 6e-43 | PREDICTED: strictosidine synthase 3-like [Nicotiana tomentosiformis] |
| JMSF022O17 | Sequence | 629 | 006515 (3) | ref|XP_009599899.1| | 3e-72 | PREDICTED: strictosidine synthase 3-like [Nicotiana tomentosiformis] | 736 | 001065 (3) | ref|XP_009599899.1| | 2e-48 | PREDICTED: strictosidine synthase 3-like [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF022O17+ TCACTAAGCAAAGACGGCGACTTTCTCCTCGTCGCAGAAACCACGACATG
rJMFF026N15+ TCGTCGCAGAAACCACGACATG
rJMFF012C11+ TAAGCAAAGACGGCGACTTTCTCCTCGTCGCAGAAACCACGACATG
____________________________________________________________
consensus TCACTAAGCAAAGACGGCGACTTTCTCCTCGTCGCAGAAACCACGACATG
. : . : . : . : . : . :
rJMSF022O17+ -CAGGATACTGAAACTGTGGCTCAAAGCTCCAAAAACAGGGGAAGTAGAAACCATAGCCG
rJMFF026N15+ -CAGGATACTGAAACTGTGGCTCAAAGCTCCAAAAACAGGGGAAGTAGAAACCATAGCCG
rJMFF012C11+ CCAGGATACTGAAACTGTGGCTCAAAGCTCCAAAAACAGGGGAAGTAGAAACCATAGCCG
____________________________________________________________
consensus -CAGGATACTGAAACTGTGGCTCAAAGCTCCAAAAACAGGGGAAGTAGAAACCATAGCCG
. : . : . : . : . : . :
rJMSF022O17+ AACTCCCAGGATTCCCAGACAACATTAAAAGGAACGACAGAGGCGAGTTCTGGGTGGGAG
rJMFF026N15+ AACTCCCAGGATTCCCAGACAACATTAAAAGGAACGACAGAGGCGAGTTCTGGGTGGGAG
rJMFF012C11+ AACTCCCAGGATTCCCAGACAACATTAAAAGGAACGACAGAGGCGAGTTCTGGGTGGGAG
____________________________________________________________
consensus AACTCCCAGGATTCCCAGACAACATTAAAAGGAACGACAGAGGCGAGTTCTGGGTGGGAG
. : . : . : . : . : . :
rJMSF022O17+ TTCATTCCAGGAGGAGGACATTCATGAAATGGGCATTGTCAAAATTTTGGGTTGGGAATG
rJMFF026N15+ TTCATTCCAGGAGGAGGACATTCATGAAATGGGCATTGTCAAAATTTTGGGTTGGGAATG
rJMFF012C11+ TTCATTCCAGGAGGAGGACATTCATGAAATGGGCATTGTCAAAATTTTGGGTTGGGAATG
____________________________________________________________
consensus TTCATTCCAGGAGGAGGACATTCATGAAATGGGCATTGTCAAAATTTTGGGTTGGGAATG
. : . : . : . : . : . :
rJMSF022O17+ CTTTGGTCAAACTTCCGTTTGATCTTACCAAGGCTTATTCGTATCTGGGCAGTGTTGTTG
rJMFF026N15+ CTTTGGTCAAACTTCCGTTTGATCTTACCAAGGCTTATTCGTATCTGGGCAGTGTTGTTG
rJMFF012C11+ CTTTGGTCAAACTTCCGTTTGATCTTACCAAGGCTTATTCGTATCTGGGCAGTGTTGTTG
____________________________________________________________
consensus CTTTGGTCAAACTTCCGTTTGATCTTACCAAGGCTTATTCGTATCTGGGCAGTGTTGTTG
. : . : . : . : . : . :
rJMSF022O17+ GTGGATATGGGTTTGGAGTGAGGATGAATGGAAATGGAGATGTTTTGGAGGTTTTGGAAG
rJMFF026N15+ GTGGATATGGGTTTGGAGTGAGGATGAATGGAAATGGAGATGTTTTGGAGGTTTTGGAAG
rJMFF012C11+ GTGGATATGGGTTTGGAGTGAGGATGAATGGAAATGGAGATGTTTTGGAGGTTTTGGAAG
____________________________________________________________
consensus GTGGATATGGGTTTGGAGTGAGGATGAATGGAAATGGAGATGTTTTGGAGGTTTTGGAAG
. : . : . : . : . : . :
rJMSF022O17+ GTAGTGTTAATGGGAGAAGATGGAAGTATGTGAGTGAGATTGAGGAAGAAGATGATGGGA
rJMFF026N15+ GTAGTGTTAATGGGAGAAGATGGAAGTATGTGAGTGAGATTGAGGAAGAAGATGATGGGA
rJMFF012C11+ GTAGTGTTAATGGGAGAAGATGGAAGTATGTGAGTGAGATTGAGGAAGAAGATGATGGGA
____________________________________________________________
consensus GTAGTGTTAATGGGAGAAGATGGAAGTATGTGAGTGAGATTGAGGAAGAAGATGATGGGA
. : . : . : . : . : . :
rJMSF022O17+ ATTTGTGGATAGGATCTGTGAAAATGCCATTTGCAGTTAAAGAAAAGATATCAACATAGG
rJMFF026N15+ ATTTGTGGATAGGATCTGTGAAAATGCCATTTGCAGTTAAAGAAAAGATATCAACATAGG
rJMFF012C11+ ATTTGTGGATAGGATCTGTGAAAATGCCATTTGCAGTTAAAGAAAAGATATCAACATAGG
____________________________________________________________
consensus ATTTGTGGATAGGATCTGTGAAAATGCCATTTGCAGTTAAAGAAAAGATATCAACATAGG
. : . : . : . : . : . :
rJMSF022O17+ TGTGACATTATTATTACTACGGAGTATTTATTAATCTTGGTTGCTCTATACATTATTCCC
rJMFF026N15+ TGTGACATTATTATTACTACGGAGTATTTATTAATCTTGGTTGCTCTATACATTATTCCC
rJMFF012C11+ TGTGACATTATTATTACTACGGAGTATTTATTAATCTTGGTTGCTCTATACATTATTCCC
____________________________________________________________
consensus TGTGACATTATTATTACTACGGAGTATTTATTAATCTTGGTTGCTCTATACATTATTCCC
. : . : . : . : . : . :
rJMSF022O17+ AAAATGTTGAATTTCCCAATCCAAGGACTTCCAACTCCCGGTCCGACAAAATAACGGCGA
rJMFF026N15+ AAAATGTTGAATTTCCCAATCCAAGGACTTCCAACTCCCGGTCCGACAAAATAACGGCGA
rJMFF012C11+ AAAATGTTGAATTTCCCAATCCAAGGACTTCCAACTCCCGGTCCGACAAAATAACGGCGA
____________________________________________________________
consensus AAAATGTTGAATTTCCCAATCCAAGGACTTCCAACTCCCGGTCCGACAAAATAACGGCGA
. : . : . : . : . : . :
rJMSF022O17+ AGATGTAAATCATGATAACTAAGCTGAACACAGATACTAAATATTTATTTACTGCATAAA
rJMFF026N15+ AGATGTAAATCATGATAACTAAGCTGAACACAGATACTAAATATTTATTTACTGCATAAA
rJMFF012C11+ AGATGTAAATCATGATAACTAAGCTGAACACAGATACTAAATATTTATTTACTGCATAAA
____________________________________________________________
consensus AGATGTAAATCATGATAACTAAGCTGAACACAGATACTAAATATTTATTTACTGCATAAA
. : . : . : . : . : . :
rJMSF022O17+ CTTCATCCCTATGACCAACTGAGTTATCAATGGGGCCGTGTTGCTTTATACATATTTGCA
rJMFF026N15+ CTTCATCCCTATGACCAACTGAGTTATCAATGGGGCCGTGTTGCTTTATACATATTTGCA
rJMFF012C11+ CTTCATCCCTATGACCAACTGAGTTATCAATGGGGCCGTGTTGCTTTATACATATTTGCA
____________________________________________________________
consensus CTTCATCCCTATGACCAACTGAGTTATCAATGGGGCCGTGTTGCTTTATACATATTTGCA
. : . : . : . : . : . :
rJMSF022O17+ CTAGTAGTACGCCCTGAGATGGTGGAT
rJMFF026N15+ CTAGTAGTACGCCCTGAGATGGTGGATTGCCAATTGCCAAATGATTATTTATTGAGAAAA
rJMFF012C11+ CTAGTAGTACGCCCTGAGATGGTGGATTGCCAATTGCCAAATGATTATTTATTGAGAAAA
____________________________________________________________
consensus CTAGTAGTACGCCCTGAGATGGTGGATTGCCAATTGCCAAATGATTATTTATTGAGAAAA